Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01168 ATGAAACAGTTGGATCGAACTGGTGACACTGGAGCAGAGTTTGAGTCGATGTTGGAGGAGGATGCTGCAATTTTCTCTCCTGAGCTGAATTCGGACGGGAAAGGGGGATCGAAGGGCAATTCAGGGTCTAATGTTGTATCATCACCCGTTGTTTCGGCGGATTTCTCAACGGAGAAACGTAAGTGTGCGAACAATTCGTCTCCTTCGTTGTCTTCGACTTCTTCGCCTGAAAATAATGGAAGTTCTTCAGTTTCAAAATCAAAGGTACATGCAAAGAAATCATTTGTCGCTTCTCCTTCGAATTCGTCGATGACCTCCCCTTCGCCGCCGAGAAAACTCGGTTGCTTATGGTGTTCCCCGAAGAAGAAAAAGAGTAACAAGAAGAAGGAGACGCTTAGCGGTTTTAGCTGGGATAAGAACAAAGATGAGTTTGTTTCGGACTTCATGCTCTTCTCCATAACCCAAGCGCACATTGCCGGCTTTACCACTGATTTCATTCATCGTGATTCGCCTAAATCTCCTTATTACGATCCCTCTCTCTCGCGTTACGATTGTCTACGAAATGCTATCCGTCGTTCCATTTCAAGAGCAAATCGGCTTAGACTATCATCCTCCATGGGCTCGAGTAACACTGTCCAATCCCAGATGATGGATGCCGGTGGGGAATATCTCCTGAAAGTCTTTATCGGAACTCCTCCGGTGGAGCACGTCGGCATAGCCGATACCGGCAGTGATCTAATTTGGGCCCAGTGCAAGCCTTGCCAAGTTTGTTACAAGCAAACTCCGCCCATCTTTGATCCTAAAAAGTCCTCCTCCTATCGAACCTTGGGCTGCCAAACTGACTATTGCATTGAACTATACGGTACCACCTGTAGCAATGAAACACAAAATAGCTGTCAGTATACACAATCTTATGCAGACGGCTCTCGCACTTCCGGCACCCTATCCGTCGAGAACCTAACCATAGAACCATCCACAGGAGGGCAAGTTGCATTTGAGAATATAGTGTTTGGCTGTGGGCACTATAACGATGGCTTATTCAACGAGTCAGAGTCGGGCTTAATCGGGCTCGGAGCTGGTCCGATTTCATTGGTGTCTCAGCTAAGCAAATCCAAATCGGCTATACCTAGAAAGTTTTCGTATTGTTTGGCACCCGTTTACACCAACTCGAATTTAACGAGTCAAATAAACTTCGGTATTGATGCAACTGTGGTAGGTCAAGGTGTTGTCTCGACCCCTCTTCTCATAGAATCTCCCAAGGCATACTACTATCTGACATTAGAGGCTCTAAGTGTCGGAAAAACCCGGTTGGAACACAATCATGGTTTGAGCTCGTTTTCGTCGAAGAAGAAAGACGATAATGAAAATGGCAATAGCATAATCGACTCAGGAACAACCTTAACTTTTCTACCAATCGATTTATACAACAAGTTAGAGGAAGTCTTGAACAACATGATAGCTGGGGAGCCCGTCGGAGATCCGACTGGGGTATCTTTTACGTGTTATGAAGTGAAAGGCGAGATGGAGCTTCCGATAATCACGGCACATTTCCGAGGAGCAGACGTGAAATGGTGGCCTATAAATACATTCGGTAAAGTGAGTGAGGACGTGGTGTGCTTGATGATGTTACCCACCGATGGGTTGGCAATAATAGGTAATATTGCGCAGGTGAATTATCACATAGGCTACGATCTGGAGGAGAAAACAGTGTCTTTTAAGCCTACTGAATGTGGTTTGTAG 1740 45.8 MKQLDRTGDTGAEFESMLEEDAAIFSPELNSDGKGGSKGNSGSNVVSSPVVSADFSTEKRKCANNSSPSLSSTSSPENNGSSSVSKSKVHAKKSFVASPSNSSMTSPSPPRKLGCLWCSPKKKKSNKKKETLSGFSWDKNKDEFVSDFMLFSITQAHIAGFTTDFIHRDSPKSPYYDPSLSRYDCLRNAIRRSISRANRLRLSSSMGSSNTVQSQMMDAGGEYLLKVFIGTPPVEHVGIADTGSDLIWAQCKPCQVCYKQTPPIFDPKKSSSYRTLGCQTDYCIELYGTTCSNETQNSCQYTQSYADGSRTSGTLSVENLTIEPSTGGQVAFENIVFGCGHYNDGLFNESESGLIGLGAGPISLVSQLSKSKSAIPRKFSYCLAPVYTNSNLTSQINFGIDATVVGQGVVSTPLLIESPKAYYYLTLEALSVGKTRLEHNHGLSSFSSKKKDDNENGNSIIDSGTTLTFLPIDLYNKLEEVLNNMIAGEPVGDPTGVSFTCYEVKGEMELPIITAHFRGADVKWWPINTFGKVSEDVVCLMMLPTDGLAIIGNIAQVNYHIGYDLEEKTVSFKPTECGL 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43359872 43362342 - BLOR10898 Blo02g01168 57398

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01168 579 PANTHER OS07G0603500 PROTEIN-RELATED 152 577 - -
Blo02g01168 579 CDD pepsin_A_like_plant 222 577 IPR034161 -
Blo02g01168 579 Gene3D Acid Proteases 399 578 IPR021109 -
Blo02g01168 579 Gene3D Acid Proteases 201 398 IPR021109 -
Blo02g01168 579 ProSiteProfiles Peptidase family A1 domain profile. 223 573 IPR033121 -
Blo02g01168 579 SUPERFAMILY Acid proteases 217 577 IPR021109 -
Blo02g01168 579 Pfam Xylanase inhibitor N-terminal 223 399 IPR032861 -
Blo02g01168 579 PRINTS Pepsin (A1) aspartic protease family signature 549 564 IPR001461 GO:0004190|GO:0006508
Blo02g01168 579 PRINTS Pepsin (A1) aspartic protease family signature 229 249 IPR001461 GO:0004190|GO:0006508
Blo02g01168 579 PRINTS Pepsin (A1) aspartic protease family signature 459 470 IPR001461 GO:0004190|GO:0006508
Blo02g01168 579 MobiDBLite consensus disorder prediction 1 119 - -
Blo02g01168 579 MobiDBLite consensus disorder prediction 33 109 - -
Blo02g01168 579 Pfam Xylanase inhibitor C-terminal 423 573 IPR032799 -
Blo02g01168 579 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 152 577 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01168 - - - mdm:114825519 441.425
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00152 Blo-Chr1:2059993 Blo02g01168 Blo-Chr2:43359872 2.16E-115 dispersed
Blo01g00153 Blo-Chr1:2068508 Blo02g01168 Blo-Chr2:43359872 1.36E-123 dispersed
Blo02g01168 Blo-Chr2:43359872 Blo03g01522 Blo-Chr3:42112890 3.63E-74 dispersed
Blo16g00925 Blo-Chr16:37189549 Blo02g01168 Blo-Chr2:43359872 1.19E-41 dispersed
Blo02g01167 Blo-Chr2:43324372 Blo02g01168 Blo-Chr2:43359872 3.41E-118 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g925 Blo02g01168 . . . . . . . . Cmo16g00568 . . . . . Cpe14g00442 . . . . . . . . . . . . . . . . . Cone6ag0876 . . . . . . . . . . . . . . . . . Cma16g00522 . . Cpe01g00529 . . . . . . . . . . . . . . . . Csa04g00694 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001637 0 2 1 0 0 2 0 3 2 3 1 2 4 3 2 6 2 1 5 3 3 1 3 5 6 2 2 4 3 0 71
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g01168 Blo_Chr02 FPKM 44.281975 44.26543 28.861462 29.549269 81.936523 78.677261 86.844353 2.761668 2.234113 2.790661