Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01188 ATGGAAGGCGTACCCCACCCTATACCTCGAACAGTTGAGGAAGTTTTCAGTGACTTCAAAGGCAGACGTTCTGGCTTGATCAAAGCTCTTACCACTGATGTTGAGAAATTTTTTCAACAGTGCGATCCTGGTGGGTTCTCTTTTCTTTCCGTGCCCTTGGAGCGCCTTGACGTCTTATCCGCTTACTGCTTTCTCTGGATGCTTGTCATGTGCGTTTTTTCAGAGAAGGAAAACTTGTGTCTCTATGGACTTCCGAATGAGACATGGGAAGTTAATCTGCCCGTAGAGGAGGTGCCTCCAGAGCTTCCGGAACCAGCATTAGGCATAAACTTTGCTAGGGATGGTATGCAGGAGAAGGATTGGCTGTCATTGGTCGCTGTTCACAGTGATTCATGGTTGCTAGCTGTTTCATTTTATTTTGGTGCACGCTTTGGGTTTGGTAAGAATGAAAGGAAGAGACTTTTCCAGATGATAAATGATCTACCAACTATATTTGAAGTGGTGACAGGGAACGTTAAGCATCCTAAGGAGCAGTCGGCTACTCATAATAACAGCAGCAAAAGCAAATCAAGTGGGAAAATACAATCTCGCCAATCTGAGCCACAGAGCAAGGGAGTAAAGATGTCTCCACCCCCCAAAGAAGATGACGACAGTGGGGAGGAGGAAGAAGATGATGAGCAGGGAGCGACATGTGGTGCTTGTGGAGATAACTACGGAAATGATGAGTTTTGGATTTGTTGCGATGTTTGTGAAAGATGGTTCCACGGGAAATGTGTTAAGATTACGCCTGCAAAGGCAGAGCATATCAAGCAGTACAAGTGCCCAAGTTGCAGTAACAACAAGAGGGCTAGAGTCTGA 858 45.8 MEGVPHPIPRTVEEVFSDFKGRRSGLIKALTTDVEKFFQQCDPGGFSFLSVPLERLDVLSAYCFLWMLVMCVFSEKENLCLYGLPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVSFYFGARFGFGKNERKRLFQMINDLPTIFEVVTGNVKHPKEQSATHNNSSKSKSSGKIQSRQSEPQSKGVKMSPPPKEDDDSGEEEEDDEQGATCGACGDNYGNDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSNNKRARV 285
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43595719 43599946 + BLOR10918 Blo02g01188 57418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01188 285 CDD PHD_AL_plant 231 280 IPR044104 -
Blo02g01188 285 Pfam Alfin 11 43 IPR021998 GO:0006355|GO:0042393
Blo02g01188 285 Pfam Alfin 74 170 IPR021998 GO:0006355|GO:0042393
Blo02g01188 285 Pfam PHD-finger 231 279 IPR019787 -
Blo02g01188 285 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 279 IPR013083 -
Blo02g01188 285 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 7 1 44 - -
Blo02g01188 285 MobiDBLite consensus disorder prediction 215 229 - -
Blo02g01188 285 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 7 74 284 - -
Blo02g01188 285 MobiDBLite consensus disorder prediction 174 229 - -
Blo02g01188 285 ProSiteProfiles Zinc finger PHD-type profile. 228 280 IPR019787 -
Blo02g01188 285 MobiDBLite consensus disorder prediction 174 205 - -
Blo02g01188 285 SUPERFAMILY FYVE/PHD zinc finger 220 281 IPR011011 -
Blo02g01188 285 ProSitePatterns Zinc finger PHD-type signature. 231 277 IPR019786 -
Blo02g01188 285 PANTHER CPG BINDING PROTEIN 74 284 IPR045104 GO:0006355|GO:0042393
Blo02g01188 285 PANTHER CPG BINDING PROTEIN 1 44 IPR045104 GO:0006355|GO:0042393
Blo02g01188 285 SMART PHD_3 230 278 IPR001965 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01188 Blo03g00275 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01188 Blo-Chr2:43595719 Blo17g00276 Blo-Chr17:2903439 1.41E-102 dispersed
Blo02g01188 Blo-Chr2:43595719 Blo03g00275 Blo-Chr3:5650017 6.36E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12076 PF12165 Alfin 4.80E-50 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01188 - - jre:109018723 431.795