Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01204 ATGATCGTGACTGATTTCTTTCATAGGCATTGGAGGTTATTCATACTTATACGAGCCTCTTTGGTGGGTCGGCATGATTACAAGAGAATAGCAAAACTAGAACCTAATGCCTTCTTCTCATTCATTCCTCCAGCCAAACAGAAGCCGAACTCTGACATCTCCACTTTTCTTTTCTTCTTTTTGGTAGTGATTGCTGGGGAAATTGCTAATTTTGCAGCTTATGCTTTTGCACCTGCTATACTTGTCACCCCTCTTGGTGCTCTCAGCATAATTATCAGTGCTGCACTTGCTCATATTATTTTGAGGGAGAGGCTTCATATATTTGGAATTCTTGGCTGTGTTCTTTGGGTTGTGGGCTCTGCTACAAATATTCTTAATGCTCCTCAAGAGCGTGAAATTGAATCTGTGACTGAAGTTTGGCAATTGGCTATGGACCCAGCTTTTCTGCTATATGCGGCATTGGTTGTAGCAACTGCAGTTATAGTTATTATTCACTTTATACCTCAGTATGGCCAGACACACATAATGATTTACATAGGAGTTTGTTCTCTTGTAGGTTCATTATCGGTCATGAGTGTTAAAGCTCTCGGAATCGCTGTGAAGTTAACATTGTCCGGAATGAATCAGCTTATTTATCCCCAAACTTGGATATTCACCTTAGTTGTAATTACTTGTGTGCTTACTCAAATGAATTATTTAAACAAGGCACTAGATACATTCAACACAGCTATTGTATCCCCAATTTACTATGTCATGTTCACCTCATTAACCATTCTGGCTAGTGTCATCATGTTCAAGGATTGGGATCGGCAGAGCCAGAGCCAGAGCCAAGCAGTGACTGAAATCTGTGGGTTTGTAACTATTCTTTCAGGAACTTTTCTTCTTCACAGAACAAAGGACATGGCTGATGATGGATATGATGCGTTGGATCCGAATGGCAACATAACTATCTCGTGGGATTTCATGCTACAGAACGAAGAAACATACGATGTGAAAGTCTACATATACAACATGCAACTATTCAGGAATGTAGAGCCACCGGGATGGGAGCTCAAGTGGGAATGGAAAGGAGACGAGGTGATTTGGAATATGAGGGGAGCAGAGGCCAGTCAGCAAGGAGACTGCTCCAAATACAGGGGAAGGCAAGAGCTGCCCCATTGTTGCCTGAGGAAACCCGCCATCGTCGATTTAATGCCCGGAGCGTCCTTCAATCTTCAGGTTTCCAACTGCTGTAAAGCTGGGGTGCTATCTTCAATGGCGCAAGATCCTTCCGGCTATGCTTCCGCCTTCCAGATGACAATCGAAATGCCTGCGGGAGGTAGATTTATGATGCCTGAGAATTTCAGTCTGGGTCTTCCTGGGTATAGCTGCGGATCTCCTTTTCGGGTCTCTCCTAGTAAGTTCAGCGCAGACGGGGGCCGCCGATGGACTCAAGCTCTAACCTGGAACTTGACCTGTATTTACTCACAATTCAGAGCATCAGCTTCCCCAAAGTGCTGCGTCTCACTCTCCGCGTTTTACAACTCCACAATTCTTCCCTGCCCTCCCTGCAGCTGCGCCTGCCAAGGACTAGCGGGATCAACTTGCGTCGAAGCAGATGAAAATCCTCCACTCTTGCAACTTCCACACAAAAATTCAAGTTTAGTGAGGTGTTCCCACCATATGTGCCCAATAAGAGTCCACTGGCATATCAAAGAAAGCTACAAAGAATATTGGAGAGTCAAGATGACTATCACCAACCTTAATATCCTCAAAAATTACTCCAAGTGGAACTTGGTCGTGCTTCACCCTAATCTGCAGAGCTTGACCCAAGTTTTCAGCTTCAATTACCGCCCTCTCATTCAGTACGGCGACATCAACGATACAGGCATGTTTTGGGGTATTCGATACTACAACGACTTGTTACTGGCCTATGGAAAAGATGGGAATGTTCAGACTGAGATGCTGCTGCACAAAGATGCCGGAATTTTCACGTTCCGGGAAGGCTGGGCTTTTCCCAGAAAAATTATATTCAACGGAGATGAATGCGTGATGCCTCCTCCAGACCATTACCCCCGGCTGCCCAATCAAGCTCTTCATGCAGCTTCCACTTCTTTCCTTTCTACATTTATTGTTTCACTTTTTCTGACCATAACTCTTCATTAA 2145 44.52 MIVTDFFHRHWRLFILIRASLVGRHDYKRIAKLEPNAFFSFIPPAKQKPNSDISTFLFFFLVVIAGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCVLWVVGSATNILNAPQEREIESVTEVWQLAMDPAFLLYAALVVATAVIVIIHFIPQYGQTHIMIYIGVCSLVGSLSVMSVKALGIAVKLTLSGMNQLIYPQTWIFTLVVITCVLTQMNYLNKALDTFNTAIVSPIYYVMFTSLTILASVIMFKDWDRQSQSQSQAVTEICGFVTILSGTFLLHRTKDMADDGYDALDPNGNITISWDFMLQNEETYDVKVYIYNMQLFRNVEPPGWELKWEWKGDEVIWNMRGAEASQQGDCSKYRGRQELPHCCLRKPAIVDLMPGASFNLQVSNCCKAGVLSSMAQDPSGYASAFQMTIEMPAGGRFMMPENFSLGLPGYSCGSPFRVSPSKFSADGGRRWTQALTWNLTCIYSQFRASASPKCCVSLSAFYNSTILPCPPCSCACQGLAGSTCVEADENPPLLQLPHKNSSLVRCSHHMCPIRVHWHIKESYKEYWRVKMTITNLNILKNYSKWNLVVLHPNLQSLTQVFSFNYRPLIQYGDINDTGMFWGIRYYNDLLLAYGKDGNVQTEMLLHKDAGIFTFREGWAFPRKIIFNGDECVMPPPDHYPRLPNQALHAASTSFLSTFIVSLFLTITLH 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 43821536 43828184 + BLOR10934 Blo02g01204 57434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01204 714 Pfam COBRA-like protein 329 489 IPR006918 GO:0010215|GO:0031225
Blo02g01204 714 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 125 - -
Blo02g01204 714 PANTHER COBRA-LIKE PROTEIN 6 298 709 - -
Blo02g01204 714 Pfam Magnesium transporter NIPA 60 301 IPR008521 GO:0015095|GO:0015693|GO:0016021
Blo02g01204 714 PANTHER PROTEIN COBRA 298 709 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01204 Blo03g00295 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00059 Blo-Chr1:744170 Blo02g01204 Blo-Chr2:43821536 8.08E-39 dispersed
Blo02g01204 Blo-Chr2:43821536 Blo11g00321 Blo-Chr11:2614081 1.72E-158 dispersed
Blo12g00091 Blo-Chr12:6262989 Blo02g01204 Blo-Chr2:43821536 4.35E-40 dispersed
Blo02g01204 Blo-Chr2:43821536 Blo03g00295 Blo-Chr3:5844833 3.32E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01204 - - cmo:103496092 611.298