Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g01228 ATGGGATCATGCCTCTCTGAAGATGGTGTCTCTGCCACTCACTCCGTTCATTACTCTCCGGTAGCTTCTACGTCTCAGGAACAGGCCCTTTTGCGGCGGAGAAATTCTAGGAGAAAGGTGAGCAGAAGGGATTCCACCTCCTACACCTCTTCGGATATGGAGATGCGGCTTCATCGTCTACCTGGCAGGTTGTTTTTGAGTGGCTCGACCAATTCTGCTTCCCTCTTCACCAAGCAAGGCAGAAAAGGTGTTAATCAGGATTCGATGATTGTTTGGGAGAATTTTGGCTCAAAAGAAGACGCAATTTTTTGTGGTGTCTTTGACGGCCATGGGCCCTATGGTCATTTGGTTGCGAAGAAAGTGAGGGATTCTCTTCCTCTAAAGCTAAGTGCCCAGTGGGAATTAGATGCTATGTATAAGGTTGTTCCTAATAGCGACAATCAGGAAAATAGGCAGGGGACCTCCGAAGTTACTTCATTTGAATTGATTAATGTGGATTCTAAAACTTTTCATAATGATTATGAAAGCAATAAGGAGGAAGTATTTATGACATTGAAGGAGTCATTCTTGAAGGCCTTTAAAGTAATGGATAAGGAACTCAAGCTGCATCCTCATATTGATTGCTTTTACAGTGGGACAACAGCAGCTACAATGGTCAAGCAGGGACAAGACCTCATTATAGGAAATGTAGGGGACTCGAGAGCTATACTAGGTACAAGAGATGACAATGACTCTCTGATGGCTATACAGTTGACCGTAGATCTCAAGCCAAATCTTTCAAGAGAAGCTGAAAGAATAAAGAATTGTAATGGACGAGTGTTTGCTCTACCAATTGAACCTGATGTTTTTCGAGTTTGGATGCCCAACCGTGACTCCCCTGGTCTTGCCATGGCTCGGGCATTTGGAGACTTCTGCTTAAAAGACTTTGGCTTGATCTCTGTCCCAGACATTTTTCATCATCGAATCACAGAGAGGGATGAGTTTGTTGTGCTGGCTACAGATGGGGTGTGGGATGTTCTTTCGAATGAAGAAGTGGTGTACATAGTCGGAGCTGCCTCAAAATCTTCTGCGGCTCGAGCTATTGTGGAGTCGGCAATTCGAGCTTGGAGATACAAGCACCCTTCTTCTAAAATTGATGATTGTGCTGTGGTTTGTCTCTTCCTCCACTCAACAAATACAACCACCAGTAGTTACGCCAAACCTAAAACTCTCGTTGCCGATGCAGAATGA 1230 44.47 MGSCLSEDGVSATHSVHYSPVASTSQEQALLRRRNSRRKVSRRDSTSYTSSDMEMRLHRLPGRLFLSGSTNSASLFTKQGRKGVNQDSMIVWENFGSKEDAIFCGVFDGHGPYGHLVAKKVRDSLPLKLSAQWELDAMYKVVPNSDNQENRQGTSEVTSFELINVDSKTFHNDYESNKEEVFMTLKESFLKAFKVMDKELKLHPHIDCFYSGTTAATMVKQGQDLIIGNVGDSRAILGTRDDNDSLMAIQLTVDLKPNLSREAERIKNCNGRVFALPIEPDVFRVWMPNRDSPGLAMARAFGDFCLKDFGLISVPDIFHHRITERDEFVVLATDGVWDVLSNEEVVYIVGAASKSSAARAIVESAIRAWRYKHPSSKIDDCAVVCLFLHSTNTTTSSYAKPKTLVADAE 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 44422699 44426640 + BLOR10958 Blo02g01228 57458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g01228 409 Gene3D - 67 391 IPR036457 -
Blo02g01228 409 SUPERFAMILY PP2C-like 69 390 IPR036457 -
Blo02g01228 409 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 403 - -
Blo02g01228 409 MobiDBLite consensus disorder prediction 15 30 - -
Blo02g01228 409 ProSiteProfiles PPM-type phosphatase domain profile. 72 388 IPR001932 -
Blo02g01228 409 CDD PP2Cc 71 388 IPR001932 -
Blo02g01228 409 SMART PP2C_4 55 386 IPR001932 -
Blo02g01228 409 MobiDBLite consensus disorder prediction 15 53 - -
Blo02g01228 409 Pfam Protein phosphatase 2C 161 367 IPR001932 -
Blo02g01228 409 PANTHER ALPHABET, ISOFORM E-RELATED 1 403 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01228 Blo-Chr2:44422699 Blo12g00048 Blo-Chr12:3373115 0 dispersed
Blo02g01228 Blo-Chr2:44422699 Blo18g00505 Blo-Chr18:6370709 1.48E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g01228 - - csv:101222320 508.449