Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00042 ATGGACCTGGCTCATGAAGAACCAGTTGGTACTTTAGAAATGGAGGAAATGGAGAGAAGACCCTCAACCGATTCTCTTCTGGAGCCCCGAATTTCTCGACCCCATTTTCCGGGTATGGTGAGAAAGAAAGCCTACATATTTGATGGTTTCGGGAAGTATTACGACAAAGAATGGGATCTAATTGAAGGCAGAGACAATGAATTTTGCTGGTATCATGTAGAACTTCCTAAAGGAAATCAAAAGCTCTCTCAATCTGCACAATACCTCATTGATGTTCTTTGCCCACCATTGAAACTCCAAGACATTCTCTCACTAGTCAGCAATGGACCCTTTTGTGGGCATGTAGATGGAGCTCTTGTTTTTCGAGTAAATTCGCCAGGGCCTCCCTCTAGCGATTTTACTTTCCGGGTAGCAGCTAGAGTTACAGGGAATTCTGTAATTACCATGTCTTTAGGTCGAGTTCCGAGATTAGGTTTCTCACCGATGGGCCAGTCCTTGCTGTCGGAGGTTCCGAGTGTGGAGAGTTCTTCTCATCGTAGAGGAGAAAAGAGGGAAGGGGACAGTTTTGTAATTAGAGAACACGTTCTTGAATTTCTGTTGACAATGAATCATTCTGAGGAAGCCGACAATCCCGTGCCAAAATCCGTATCAAATTTGGTCGTTCACATCATTGACACCCATGTCGATCACCTTCAAGATGTTGTCACTAAACTCGAAATGGAGTTGGATTCTGTGGAGCTTGAAATGGATAGAGGTGGATTTGCTTTGAAAAAACAAATGTTAGACGATCGAAGATTTCCCAAAATGCATCTTAATTTGCAGCGTCTTCTTCAGGTGATTTCATATGGAGAACAAGTCTTTCCACGAGTCAAAGAAAAATGCGCGACAAAACGATGGTTTGCCAATGAAGACATAAGTTCACTTGAAGAGCTAATCGGACGTTTAAGAAGACTAAAAGAGAACGTGGGATTTTTAGCGAATCGCATCACTGCGATCCAGGCCGGTCTCGATAGCTGGCAGTCAGAGCAAATCAACAAGAAACTATACTATCTCTCGTTTCTTTCAATCGTCTTCCTTCCTCTATCAGTCATCACCGGAGCTGGATTTATATCTAGAAACAGGCGGAACGAATTATTTAACTTTTATCGAGCATATTATTCTGGTGATCTTTTGTTAACTGTAAATGCAAAACCATTGTTTAGTTCTCATCATGGTCTAAAATGGTCTACCTTGGCCAGACCATTCAGTTCAAAGCCTGCAGGTAGTGATGTAGTCGGCATTGATTTGGGTACCACCAATTCTTGTGTTGCTGTGATGGAGGGAAAAAACCCAAAAGTTATTGAGAATTCAGAAGGGGCTCGTACCACACCATCAGTAGTTGCTTTTAACCAGAAAGGAGAATTACTTGTGGGAACTCCAGCAAAGCGTCAAGCTGTGACCAATCCCACTAATACAATTTTTGGAACCAAACGTCTGATTGGTAGACGCTTTGACGATGCTCAAACCCAAAAGGAAATGAAAATGGTTCCTTACAAGATAGTGAAGGCTCCCAATGGAGATGCTTGGGTGGAGGCAAATGGACAGCAGTATTCAGCCAGCCAAATCGGTGCTTTTATTCTTACTAAAATGAAAGAAACTGCCGAGGCTTACCTAGGAAAGTCAGTTTCAAAAGCTGTGATTACTGTTCCTGCTTATTTTAACGATGCTCAGAGGCAAGCAACAAAGGATGCTGGCAGAATCGCTGGTCTTGATGTACTGAGAATCATCAATGAACCTACTGCTGCTGCACTTTCTTATGGAATGAACAATAAAGAGGGTCTCATAGCTGTTTTTGATCTTGGAGGTGGAACATTTGATGTTTCAATCTTGGAGATTTCTAATGGGGTTTTTGAGGTAGTGAAAGCGACGAATGGGGATACATTCTTGGGAGGGGAAGATTTTGACAATGCCTTGTTAGATTTCTTGGTGAGTGAGTTCAAGAGGACTGAGTCAATTGATCTATCGAAGGACAAGCTGGCACTACAGAGGCTTAGGGAAGCTGCTGAAAAGGCAAAAATTGAGCTCTCATCAACATCACAAACCGAAATCAATTTGCCATTCATCACAGCTGATGCATCTGGTGCAAAGCATTTAAATATCACACTTACGAGATCAAAGTTTGAAAGCCTAGTTAATAACCTGATCGAAAGAACCAGGGCTCCGTGTAAGAACTGCTTGAAGGATGCCAATATATCTACTAAAGATGTGGATGAAGTACTTCTTGTTGGAGGTATGACCCGTGTCCCCAAGGTGCAAGAAGTAGTTTCAGAGATATTTGGAAAGAGCCCCAGTAAGGGAGTGAATCCAGATGAGGCCGTCGCTTTAGGAGCAGCAATTCAGGGTGGTATTCTGCGTGGTGATGTCAAAGAGCTGCTTCTTCTTGATGTTACCCCATTATCTCTTGGTATAGAGACCCTTGGTGGTATCTTCACAAGGTTGATTAACAGGAATACTACCATTCCAACTAAGAAGAGCCAGATTTTCATTTTCTGCTTTATGGTTGAAATAACAAAGCACATCTGTACAGACGTGGTGTTCTCAACTGCTGCCGACAATCAAACCCAAGTTGGTATTAAAGTACTGCAAGGAGAACGTGAAATGGCTGCGGATAACAAGATCTTGGGAGAATTTGAGCTTGTTGGTATTCCTCCCTCCCCAAGAGGAATTCCACAGATTGAAGTCACATTTGACATTGATGCCAATGGCATAGTGACAGTCTCGGCCAAGGACAAGGCCACTTCAAAAGAACAACAAATCACTATCCGGTCATCAGGAGGCCTGTCGGAAGACGAGATTGAGAAGATGGTAAAGGAAGCAGAGTTACACTCACAGAGGGACCAAGAAAGAAAAACTCTGATTGATGTCAGAAACAACGCAGACACCACCATTTACAGCATAGAAAAGAGCTTAAGTGAATATAAAGACAAAATTCCGGGTGAGGTTGCCAAGGAGATTGAGGATGCAGTGGCAGACTTGAGAAAGGCAATAGGTGGAGACAATGTGGAGGAAATAAAATCAAAACTTGACATTGCGAACAAGGCTGTGTCAAAGATTGGGCAGCACATGGCCGGGGGTGCAGGTGGATCTTCTGCTGGTGGTGCCCAGGCTGGTGGGGAGCAGGCGCCTGAGGCTGATTATGAGGAGGTGAAGAAATGA 3195 43.35 MDLAHEEPVGTLEMEEMERRPSTDSLLEPRISRPHFPGMVRKKAYIFDGFGKYYDKEWDLIEGRDNEFCWYHVELPKGNQKLSQSAQYLIDVLCPPLKLQDILSLVSNGPFCGHVDGALVFRVNSPGPPSSDFTFRVAARVTGNSVITMSLGRVPRLGFSPMGQSLLSEVPSVESSSHRRGEKREGDSFVIREHVLEFLLTMNHSEEADNPVPKSVSNLVVHIIDTHVDHLQDVVTKLEMELDSVELEMDRGGFALKKQMLDDRRFPKMHLNLQRLLQVISYGEQVFPRVKEKCATKRWFANEDISSLEELIGRLRRLKENVGFLANRITAIQAGLDSWQSEQINKKLYYLSFLSIVFLPLSVITGAGFISRNRRNELFNFYRAYYSGDLLLTVNAKPLFSSHHGLKWSTLARPFSSKPAGSDVVGIDLGTTNSCVAVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTIFGTKRLIGRRFDDAQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSASQIGAFILTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVVKATNGDTFLGGEDFDNALLDFLVSEFKRTESIDLSKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFESLVNNLIERTRAPCKNCLKDANISTKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQIFIFCFMVEITKHICTDVVFSTAADNQTQVGIKVLQGEREMAADNKILGEFELVGIPPSPRGIPQIEVTFDIDANGIVTVSAKDKATSKEQQITIRSSGGLSEDEIEKMVKEAELHSQRDQERKTLIDVRNNADTTIYSIEKSLSEYKDKIPGEVAKEIEDAVADLRKAIGGDNVEEIKSKLDIANKAVSKIGQHMAGGAGGSSAGGAQAGGEQAPEADYEEVKK 1064
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1753017 1759476 + BLOR11223 Blo03g00042 57506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00042 1064 CDD HSPA9-like_NBD 421 797 - -
Blo03g00042 1064 Gene3D Actin; Chain A, domain 4 644 731 - -
Blo03g00042 1064 ProSitePatterns Heat shock hsp70 proteins family signature 2. 610 623 IPR018181 -
Blo03g00042 1064 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 799 973 IPR029047 -
Blo03g00042 1064 SUPERFAMILY CorA soluble domain-like 29 334 IPR045861 -
Blo03g00042 1064 Pfam Hsp70 protein 424 1035 IPR013126 GO:0005524|GO:0140662
Blo03g00042 1064 Coils Coil 667 694 - -
Blo03g00042 1064 MobiDBLite consensus disorder prediction 1 28 - -
Blo03g00042 1064 ProSitePatterns Heat shock hsp70 proteins family signature 1. 427 434 IPR018181 -
Blo03g00042 1064 ProSitePatterns Heat shock hsp70 proteins family signature 3. 752 766 IPR018181 -
Blo03g00042 1064 SUPERFAMILY Actin-like ATPase domain 424 604 IPR043129 -
Blo03g00042 1064 Coils Coil 228 248 - -
Blo03g00042 1064 Gene3D - 600 781 - -
Blo03g00042 1064 TIGRFAM prok_dnaK: chaperone protein DnaK 424 1035 IPR012725 GO:0005524|GO:0006457|GO:0051082
Blo03g00042 1064 MobiDBLite consensus disorder prediction 1 26 - -
Blo03g00042 1064 Coils Coil 308 328 - -
Blo03g00042 1064 Pfam CorA-like Mg2+ transporter protein 209 366 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Blo03g00042 1064 MobiDBLite consensus disorder prediction 1033 1064 - -
Blo03g00042 1064 Gene3D - 940 1037 IPR029048 -
Blo03g00042 1064 PRINTS 70kDa heat shock protein signature 803 822 - -
Blo03g00042 1064 PRINTS 70kDa heat shock protein signature 451 463 - -
Blo03g00042 1064 PRINTS 70kDa heat shock protein signature 474 482 - -
Blo03g00042 1064 PRINTS 70kDa heat shock protein signature 749 765 - -
Blo03g00042 1064 PRINTS 70kDa heat shock protein signature 423 436 - -
Blo03g00042 1064 PRINTS 70kDa heat shock protein signature 616 626 - -
Blo03g00042 1064 PRINTS 70kDa heat shock protein signature 780 800 - -
Blo03g00042 1064 PRINTS 70kDa heat shock protein signature 558 578 - -
Blo03g00042 1064 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 797 939 IPR029047 -
Blo03g00042 1064 Gene3D Magnesium transport protein CorA, transmembrane region 213 342 - -
Blo03g00042 1064 Hamap Chaperone protein DnaK [dnaK]. 421 1062 IPR012725 GO:0005524|GO:0006457|GO:0051082
Blo03g00042 1064 Gene3D - 425 794 - -
Blo03g00042 1064 SUPERFAMILY Actin-like ATPase domain 605 797 IPR043129 -
Blo03g00042 1064 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 403 1048 - -
Blo03g00042 1064 PANTHER HEAT SHOCK PROTEIN 70KDA 403 1048 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00042 Blo-Chr3:1753017 Blo02g00954 Blo-Chr2:36967719 0 dispersed
Blo02g00878 Blo-Chr2:33941578 Blo03g00042 Blo-Chr3:1753017 0 transposed
Blo02g00899 Blo-Chr2:34742038 Blo03g00042 Blo-Chr3:1753017 0 transposed
Blo15g00777 Blo-Chr15:26631091 Blo03g00042 Blo-Chr3:1753017 0 transposed
Blo02g00897 Blo-Chr2:34652310 Blo03g00042 Blo-Chr3:1753017 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00042 K04043 - pvy:116124125 1132.86