Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00047 ATGGGTGAAAACGATGTCGTATTGGCCAGTGGGTTTGGGAATTTGATCATGATGCCCATTGTCTCCTTCACCATCAACAATGAGATTGGGGTTTCACCCTACCACTTCTCATTCCATTTCCCCTTTTCCCTTTACTCTTCCTTCTCCCCTCCTCCCCTTCCCCTCTCTCCCTCTTCTTCCCCACTCTGCGCCCTCCACCTACTCCTCTTCTTCAGGTCTGTTTTTGCCGTGAATTGTGTTTACAAGAGTGAAATACGACCTAGAGATTATTTGATGGCTTCAGGAAATGAACTTCCAGAACTAAACAGAAGCCTTTACCCGCATATAGAACCATACAATACAGGATTTTTGAAGGTTTCTGATCTTCATAGTATTTATTGGGAGCAGTCGGGAAATCCCAGTGGATATTCAGTGGTCTTTCTTCATGGGGGACCGGGGGGAGGAACAGCGCCCAGTAATAGGAGATTTTTTGATCCCGAATTTTATCAGATCATTTTGTTTGATCAGCGAGGTTCTGGAAAAAGTACACCTCATGCATGCTTGGTAGAAAATACTACATGGAATCTCATTGATGACATTGAAAAGCTAAGGGAGCACTTGGGAATTTCAGAATGGCTGGTATTTGGTGGGTCATGGGGGAGTACACTTGCCCTTGCGTACAGTCAGATGCATCCTGAAAAGGTTACTGGCTTGGTCCTCCGAGGAGTATTTCTCTTGCGGAAGAAAGAGATTGATTGGTTTTATGAAGGTGGTGCTGCTGCTATATATCCAGATGCTTGGGAGCCATTCAGAGACCTAATTCCAGAAAATGAGCGGGAATGTTTCCTGAATGCGTACAGCAAGAGGTTAAATTCTGATGATATGGAGACACAGTATGCAGCTGCTAGGGCGTGGACCAAATGGGAAATGATGACTGCCCATCTTCTTCAAAATGAAGAGAACATTAAAAGAGGGGATGACGATAACTTTTCACTGGCATTTGCAAAGATTGAAAACCACTATTTTGTAAACAAAGGATTCTTCCCTGCTGATTCTTACCTATTAGATAATATTGACAAAATACAGCATATTAATACTGTAATCGTACAGGGAAGATATGATGTCTGTTGCCCAATGATGTCTGCTTGGGATCTTCATAAAGCATGGCCCGAGGCAGAACTTATAGTTGTTCAAGATGCAGGGCATTCGGCCAATGAACCCGGGATCACTGCAGAGCTTGTTGCTGCAACTGAGAAACTAAAACAAGTAATCCACAAAACTTCACCTTGA 1269 43.5 MGENDVVLASGFGNLIMMPIVSFTINNEIGVSPYHFSFHFPFSLYSSFSPPPLPLSPSSSPLCALHLLLFFRSVFAVNCVYKSEIRPRDYLMASGNELPELNRSLYPHIEPYNTGFLKVSDLHSIYWEQSGNPSGYSVVFLHGGPGGGTAPSNRRFFDPEFYQIILFDQRGSGKSTPHACLVENTTWNLIDDIEKLREHLGISEWLVFGGSWGSTLALAYSQMHPEKVTGLVLRGVFLLRKKEIDWFYEGGAAAIYPDAWEPFRDLIPENERECFLNAYSKRLNSDDMETQYAAARAWTKWEMMTAHLLQNEENIKRGDDDNFSLAFAKIENHYFVNKGFFPADSYLLDNIDKIQHINTVIVQGRYDVCCPMMSAWDLHKAWPEAELIVVQDAGHSANEPGITAELVAATEKLKQVIHKTSP 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1786419 1790200 + BLOR11228 Blo03g00047 57511

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00047 422 Gene3D alpha/beta hydrolase 102 414 IPR029058 -
Blo03g00047 422 Pfam alpha/beta hydrolase fold 137 398 IPR000073 -
Blo03g00047 422 SUPERFAMILY alpha/beta-Hydrolases 103 398 IPR029058 -
Blo03g00047 422 PRINTS Prolyl aminopeptidase (S33) family signature 138 146 IPR002410 GO:0006508|GO:0008233
Blo03g00047 422 PRINTS Prolyl aminopeptidase (S33) family signature 164 175 IPR002410 GO:0006508|GO:0008233
Blo03g00047 422 PRINTS Prolyl aminopeptidase (S33) family signature 207 221 IPR002410 GO:0006508|GO:0008233
Blo03g00047 422 TIGRFAM pro_imino_pep_1: prolyl aminopeptidase 110 413 IPR005944 GO:0004177|GO:0005737|GO:0006508
Blo03g00047 422 PANTHER PROLINE IMINOPEPTIDASE 90 416 IPR005944 GO:0004177|GO:0005737|GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00047 K01259 pip; proline iminopeptidase [EC:3.4.11.5] - csv:101217220 607.06
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00047 Blo-Chr3:1786419 Blo05g00295 Blo-Chr5:3333734 6.97E-06 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g821 . Blo03g00047 Bda06g01143 . Bpe07g00301 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1060 Cone10ag1075 . . . . . . . . . . . . . . Cmo16g00310 . . . . Cpe14g00242 . Bhi11g01083 . . . . . . . . . . . . . Lsi03g00992 . . Cme07g02225
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007769 1 5 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00047 Blo_Chr03 FPKM 41.813969 44.431419 156.467041 154.767578 76.047447 80.368652 74.799538 91.493225 89.589035 97.59388