Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00075 ATGGTGGCTGCCATTTCTGAAGCAGCTTCGAAGTACCTACCTACCCCCAGACCAAGTCTAAGACCACAAGAGGAAGAACGGCAACAAACCCCTTTCCGAAACCAGTCGACACCATTGGAGAAAGACAATGGCGTCTTTCCCAGAAGGCCTAGAGGTAGACAAGTCTCTTCCAGGTACATGTCTCCTTCTCCTTCTACTTCTACTTCGACTTCTTCGACAAACTCCTCTTATTCATCTTCGAGAAGATGCGCATCTCCTTTGGTTTCGCGGTCGACAAATCTCACTCCCTTATCGACTCCTTTACCTTTGACGGGTCCAAAGAGGTCACAATCCGTCGACCGGCGGCGACCGGCGACTCCTCGGCCGATGGTTGTGGACTTGAAGCAAAGGAACGCCGGGGAGGTCTCGGCGGCTTCGAAACTTTTGATCACTTCGACTCGGAGCTTGTCAGTTTCGTTTCAAGGGGAGTCGTTTTCCCTTCCGATTAGTAAGGCAAAAGCTGCAGCACCCCCGACTACGAGCAATGCAAGGAAGGTGACTCCAGATAAGCGGAGGTCGACGCCAATTAGAGGGAAGGGTGACGGAAATGCAGATCAGGTGGAGAATTCGAAGCCTATGGATCAACATCGATGGCCGGGTAGAACTCGGCAACTCAATGTGGGTTCTAACTCGTTGGGGAGGAGTTTGGATTTCTCTGGCGATGCGAGGAAGCTCCTTGGAATTGGATCTGGAAATGTGATTAGTACCTTAAAGGAGTCCATTGTAGATGAAAGTAGAAGAGCTTCTTTTGATGGGAGATTGATCTTAAATTTGGGGAATGCTGGGTTTTTGAAAGCAGTTCAGCCAAACTCAAATGAATCTTCTGTGGCTTCTGATCTCACTCCCTCCGACAATGACAGTGTTTCCTCTGGTAGCACTGCAGGAATGCAAGATTTTGATGACGTCGGAAAATGTCGAAATGGGTCCAGAGGAATTGTTTCTTCCACAAAATTTTGGCAGGAGACAAATAGCCGAATGAGGCACCTTCACGACCCAGGTTCCCCATTATCGCATAGTCCTGGGTCCAGATTGGCTGTGCCATCAAAATTTGTTCAGTTGAAAAAAGTAGCCGCTGATAGTCCAGTATCATCTCCAAGAACAATGGCTTCACCTAGAAGACCTGCCACTAGGCCTTCATCACCTGGCAAACTCTGGATATCTTCAGCTCCATCCCCATCAAGGGGAATGGCTAGTCCTTCACGTGTGAGAAATGCAAATAATGGATCATTAACTAGTAATTCCAGCAATCCTCCTTCAATTCTCAGTTTTGCTGATGATGTTCGAAGAGGGAAGATTGGGGAAGATCGCATAGTCGATGCGCATATGTTGAGGCTTCTGTATAATTGTTACTTACAATGGCGATTCGTCAATGCAAGGGCAGACAATTCTTTCTTGGTGCAGAGACTAAATGCAGAGAAAAACCTGTGGAATGCATGGGTCACAATTTCAGAACTACGCCATTCTGTCACGCTTAAACGAATCAAGTTATTTTTGCTGAGGAAAAAGTTGAAGCTAACATCCATCCTCAAGGGACAAATGCATTATTTAGAAGAATGGGCTGTTCTAGACAGAGATCATTCCGGTTCTTTACTTGGAGCTACTGGGGCTTTGGAGGCCAGTATTCTCCGTCTGCCAGTTGTTGGAAAAGCAGTAGTGGATATTCAAATTTTGAAAGAGGCTGTGAGCTCAGCAGTTGACGTTATGCATGCAATGGCGTCGTCTATGTCCTCTCTTTTGTCAAAGGTGGAGGAAATGAATTTTGTGGTGACGGAGCTGGCGAAGGTGACCTCTCATGAGCGGATTTTGCTTCACCAATGCAAAGACTTCTTGTCCACTTTAGCTACCATGCAGGTCAAAGACTCTAGCTTGAGAACTCACATGCTTCAAATGAGCCGAGTAGGAGCATCCGGCGGCCTGACAACACGCGTGTAG 1971 47.23 MVAAISEAASKYLPTPRPSLRPQEEERQQTPFRNQSTPLEKDNGVFPRRPRGRQVSSRYMSPSPSTSTSTSSTNSSYSSSRRCASPLVSRSTNLTPLSTPLPLTGPKRSQSVDRRRPATPRPMVVDLKQRNAGEVSAASKLLITSTRSLSVSFQGESFSLPISKAKAAAPPTTSNARKVTPDKRRSTPIRGKGDGNADQVENSKPMDQHRWPGRTRQLNVGSNSLGRSLDFSGDARKLLGIGSGNVISTLKESIVDESRRASFDGRLILNLGNAGFLKAVQPNSNESSVASDLTPSDNDSVSSGSTAGMQDFDDVGKCRNGSRGIVSSTKFWQETNSRMRHLHDPGSPLSHSPGSRLAVPSKFVQLKKVAADSPVSSPRTMASPRRPATRPSSPGKLWISSAPSPSRGMASPSRVRNANNGSLTSNSSNPPSILSFADDVRRGKIGEDRIVDAHMLRLLYNCYLQWRFVNARADNSFLVQRLNAEKNLWNAWVTISELRHSVTLKRIKLFLLRKKLKLTSILKGQMHYLEEWAVLDRDHSGSLLGATGALEASILRLPVVGKAVVDIQILKEAVSSAVDVMHAMASSMSSLLSKVEEMNFVVTELAKVTSHERILLHQCKDFLSTLATMQVKDSSLRTHMLQMSRVGASGGLTTRV 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2651419 2657653 - BLOR11256 Blo03g00075 57539

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00075 656 MobiDBLite consensus disorder prediction 369 430 - -
Blo03g00075 656 Pfam QWRF family 300 616 IPR007573 -
Blo03g00075 656 MobiDBLite consensus disorder prediction 286 309 - -
Blo03g00075 656 PANTHER AUGMIN FAMILY MEMBER 45 649 - -
Blo03g00075 656 PANTHER QWRF MOTIF-CONTAINING PROTEIN 2 45 649 - -
Blo03g00075 656 MobiDBLite consensus disorder prediction 164 221 - -
Blo03g00075 656 MobiDBLite consensus disorder prediction 286 319 - -
Blo03g00075 656 MobiDBLite consensus disorder prediction 337 356 - -
Blo03g00075 656 MobiDBLite consensus disorder prediction 56 106 - -
Blo03g00075 656 MobiDBLite consensus disorder prediction 394 430 - -
Blo03g00075 656 MobiDBLite consensus disorder prediction 1 125 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00075 - - - cmo:103495301 727.628
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo02g00934 Blo03g00075 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00636 Blo-Chr1:7136048 Blo03g00075 Blo-Chr3:2651419 6.86E-78 dispersed
Blo01g00801 Blo-Chr1:12054575 Blo03g00075 Blo-Chr3:2651419 3.69E-31 dispersed
Blo03g00075 Blo-Chr3:2651419 Blo16g00917 Blo-Chr16:37070717 8.13E-81 dispersed
Blo17g00863 Blo-Chr17:28168608 Blo03g00075 Blo-Chr3:2651419 1.54E-134 transposed
Blo02g00934 Blo-Chr2:36204348 Blo03g00075 Blo-Chr3:2651419 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g691 Blo02g00934 Blo03g00075 Bda06g01204 . Bpe07g00273 . Bma05g00655 . Cmo19g00571 Cmo11g01414 . . . . . Cpe04g00322 Cpe15g00445 . . . . . . . Cla02g00676 Cam02g0709 Cec02g0721 Cco02g0742 Clacu02g0716 Cmu02g0713 Cre02g1027 . . Cone3ag1024 Cone10ag1039 Lsi03g00569 Csa07g00691 . Cme01g00114 . . . . . Bpe05g00476 . . . . . Cma11g01704 Cma19g00558 Car11g01138 Car19g00416 . . . . . . . . . . . . . . . . . . Chy01g00125 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005063 1 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 2 2 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00075 Blo_Chr03 FPKM 28.739841 28.697224 14.911782 16.774693 12.501438 13.313486 12.704781 38.559277 37.493023 36.14407