Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00080 ATGTTGAGGTCGTGTTGCAGGCCATTAGAGCGTTGCTTTAGCTTTCGAGGTGGAGGTGATGGCCTTTTGTGGCATAAGGATTTGAAGCATCATGCTTCTGGGGATTACTCGATTGCCGTTGTTCAAGCGAATTCGAGTCTTGAGGATCAGAGTCAGGTTTTTACGTCACCGGCTGCTACTTACGTCGGTGTTTATGACGGCCATGGCGGTCCTGAAGCTTCTCGATTCGTCAACAAGCATCTTTTTCCATATTTGCATAAATTTGCTATAGAACATGGAGAGCTATCGGCCGATGTCATAAAAAAGGCCTTTAAGGCCACAGAGGAAGACTTCTACCGTTTGGTGAAGCGATCATTACCAGCAAAGCCGCAGATTGCTTCGGTCGGATCGTGCTGTCTGCTAGGTGCTATTTCAAACGATAATTTGTTTGTGGCAAATCTTGGGGACTCAAGAGCCGTTTTAGGCCGAAGAGTTTCAGCAGGAAATAAAAATCCAGTGGTGGCAGAAAGGTTATCCACTGATCACAATGTGGGAGTTGAGGAGGTGAGAAAGGAAGTCCAAGCCCTTCATCCCGACGATTCTCATATCGTGGTGTATAATCGCGGAGTCTGGAGGATAAAGGGGATAATTCAGGTATCGAGATCGATAGGGGATGTTTATTTGAAGAAACCCGAAGTTAACAGAGATCCAAGCTTCAGGCAATTTGGAAATCCCGTTGTGCTGAGGCGACCGGTAATGACGGCAGAACCCTCCATCCTGCTTAGAAACCTCACTCCTCAAGACTTGTTCCTCATATTTGCGTCCGACGGCCTATGGGAACAGCTGAGCGACCAAGCTGCTGTCGATATCGTTTCCAACAACCCTCGCGCTGGAATTGCGAAGAGATTGGCAAGGGAGGCCCTTCGAACAGCTGCAAAGAAGCGAGAAATGAGATACAATGACGTGAAGAAACTGGAAAGGGGCATAAGGCGCCATTTCCACGACGACATATCGGTGGTCGTAGTTTATCTCGATCATCACAAGAAAAGCTTCTCCAGGGCTGGATTCGATCTGAACTCGATAGGCTGCACCAATTCCCCCGCCGACATCTTCTCTTTAAGCACAGATCAAGCCCAATAA 1119 47.9 MLRSCCRPLERCFSFRGGGDGLLWHKDLKHHASGDYSIAVVQANSSLEDQSQVFTSPAATYVGVYDGHGGPEASRFVNKHLFPYLHKFAIEHGELSADVIKKAFKATEEDFYRLVKRSLPAKPQIASVGSCCLLGAISNDNLFVANLGDSRAVLGRRVSAGNKNPVVAERLSTDHNVGVEEVRKEVQALHPDDSHIVVYNRGVWRIKGIIQVSRSIGDVYLKKPEVNRDPSFRQFGNPVVLRRPVMTAEPSILLRNLTPQDLFLIFASDGLWEQLSDQAAVDIVSNNPRAGIAKRLAREALRTAAKKREMRYNDVKKLERGIRRHFHDDISVVVVYLDHHKKSFSRAGFDLNSIGCTNSPADIFSLSTDQAQ 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2712736 2714705 + BLOR11261 Blo03g00080 57544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00080 372 CDD PP2Cc 42 337 IPR001932 -
Blo03g00080 372 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Blo03g00080 372 SUPERFAMILY PP2C-like 42 340 IPR036457 -
Blo03g00080 372 SMART PP2C_4 27 335 IPR001932 -
Blo03g00080 372 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 371 - -
Blo03g00080 372 PANTHER ALPHABET, ISOFORM E-RELATED 3 371 - -
Blo03g00080 372 Pfam Protein phosphatase 2C 57 306 IPR001932 -
Blo03g00080 372 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Blo03g00080 372 Gene3D - 25 346 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00080 Blo-Chr3:2712736 Blo18g00725 Blo-Chr18:18643623 3.11E-134 dispersed
Blo03g00080 Blo-Chr3:2712736 Blo13g00497 Blo-Chr13:26208463 7.71E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00080 - K01102 zju:107427140 605.905