Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00087 ATGTTGAAGTTATCGGGATGTTTTGTGAGTTTTCTTTGGCATGGTGATTGTGATCCAGGCTGTCTATTTGCAATTTCGATTGCAAAAGAGGAAGCTACTAAGTTGGGAACAGTCATTGGAATAGATCTTGGCACTACATACTCGTGTGTGGGCGTATACAAGAACGGTCATGTTGAAATTATAGCAAATGACCAAGGAAATCGTATCACTCCATCATGGGTCGCTTTCACAGAAAGTGAGAGACTTATTGGTGAGGCTGCAAAGAATCAAGCAGCTGTCAACCCAGAAAGGACCGTATTTGACGTTAAGAGACTTATTGGAAGAAAGTTTGAGGACAAGGAAGTTCAGAAAGACATAAAGCTCTTTCCCTATAAGATTGTGAACAAGGATGGAAAACCTTACATTCAGGTGCAAATCAATAATGGCGAAACCAAGGTGTTCAGCCCTGAAGAGATCAGTGCCATGATTCTGACTAAGATGAAGGAAACTGCGGAAGCATTCCTTGGGAAGAAAATCAAGGATGCTGTTGTGACAGTTCCTGCTTACTTTAATGATGCCCAGAGGCAGGCTACTAAGGATGCAGGTGTAATTGCTGGACTCAATGTTGCTAGAATCATAAATGAACCTACTGCAGCTGCAATTGCTTATGGTCTTGACAAGAAAGGTGGCGAGAAAAACATTCTCGTGTTTGATCTTGGAGGTGGAACATTCGATGTCAGTATTTTGACAATTGATAATGGTGTTTTTGAGGTTTTGGCCACAAATGGAGACACTCATTTGGGAGGTGAGGATTTTGATCAGAGAATAATGGAATACTTCATCAAGTTAATCAAGAAGAAGCATGGGAAGGACATCAGCAGGGACAACAGGGCACTTGGAAAGTTGAGAAGAGAAGCAGAGCGTGCCAAGAGAGCTTTGAGTAGTCAACACCAAGTCCGGGTGGAAATTGAATCACTTTTTGATGGTATAGATTTCTCAGAACCATTGACGCGGGCAAGATTTGAAGAGCTGAACAATGACTTGTTCAGAAAAACCATGGGACCAGTGAAAAAGGCTATGGAAGATGCTGGGTTGGAGAAAAATCAGATCGATGAGATTGTTCTTGTTGGTGGAAGCACAAGAATTCCAAAGGTTCAACAGCTTCTAAAGGACTATTTTGATGGGAAGGAACCCAACAAGGGAGTGAATCCTGACGAGGCAGTCGCATATGGCGCTGCTGTACAAGGAAGTATCTTGAGTGGAGAGGGCGGTGAAGAAACCAAAGACATCCTTCTTCTTGATGTCGCTCCTCTCACCCTCGGAATTGAAACTGTTGGTGGGGTGATGACAAAGTTGATCCCCAGAAACTCTGTCATTCCAACCAAGAAATCTCAGGTCTTCACTACTTACCAGGATCAGCAGACTACTGTATCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTTACAAAGGATTGCAGAAATCTGGGGAAATTCGATTTGAATGGAATTCCTCCAGCCCCAAGGGGAACCCCTCAAATTGAAGTCACATTTGAAGTCGATGCAAATGGTATCCTGAACGTTAAAGCTGAAGACAAAGGTACTGGAAAGTCAGAGAAGATTACAATCACCAACGACAAAGGCCGCCTGAGCCAGGAGGAGATTGAGAGAATGGTTCGAGAGGCTGAAGAGTTTGCTGAGGAAGACAAGAAGGTGAAGGAGAAGATTGATGCTAGGAACAGCCTTGAGACCTACGTCTACAACATGAAGAACCAAATCAACGACAAAGACAAGCTTGCCGACAAGCTCGAGTCTGACGAGAAAGAAAAAGTGGAGACGGCAGTGAAGGAAGCTCTCGAGTGGCTGGACGACAATCAAAGCGCCGAGAAGGAGGATTACGAAGAGAAGCTCAAAGAGGTGGAAGCCGTGTGCAACCCCATCATCACTGCCGTTTATCAAAGGTCCGGTGGCCCCACGTCTGGCGGATCAGCAGATGATGAGGATGAATCGCACGATGAGCTTTGA 2001 44.53 MLKLSGCFVSFLWHGDCDPGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTESERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDIKLFPYKIVNKDGKPYIQVQINNGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISRDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNSVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKVETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGPTSGGSADDEDESHDEL 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2932799 2935385 - BLOR11268 Blo03g00087 57551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00087 666 Gene3D - 571 646 IPR029048 -
Blo03g00087 666 PANTHER LUMINAL-BINDING PROTEIN 23 653 - -
Blo03g00087 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 417 570 IPR029047 -
Blo03g00087 666 PANTHER HEAT SHOCK PROTEIN 70KDA 23 653 IPR013126 GO:0005524|GO:0140662
Blo03g00087 666 Coils Coil 581 601 - -
Blo03g00087 666 MobiDBLite consensus disorder prediction 643 666 - -
Blo03g00087 666 Pfam Hsp70 protein 38 645 IPR013126 GO:0005524|GO:0140662
Blo03g00087 666 Gene3D - 39 410 - -
Blo03g00087 666 SUPERFAMILY Actin-like ATPase domain 36 220 IPR043129 -
Blo03g00087 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 229 242 IPR018181 -
Blo03g00087 666 Coils Coil 285 305 - -
Blo03g00087 666 Coils Coil 615 635 - -
Blo03g00087 666 SUPERFAMILY Actin-like ATPase domain 223 414 IPR043129 -
Blo03g00087 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 418 575 IPR029047 -
Blo03g00087 666 Coils Coil 547 567 - -
Blo03g00087 666 CDD HSPA5-like_NBD 36 410 IPR042050 -
Blo03g00087 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 651 IPR029048 -
Blo03g00087 666 Gene3D - 221 395 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 37 50 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 87 95 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 175 195 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 363 379 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 395 415 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 235 245 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 422 441 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 65 77 - -
Blo03g00087 666 PRINTS 70kDa heat shock protein signature 503 519 - -
Blo03g00087 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 366 380 IPR018181 -
Blo03g00087 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 41 48 IPR018181 -
Blo03g00087 666 Gene3D Actin; Chain A, domain 4 261 344 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01122 Blo-Chr1:40281780 Blo03g00087 Blo-Chr3:2932799 0 dispersed
Blo03g00087 Blo-Chr3:2932799 Blo16g00823 Blo-Chr16:34591375 0 dispersed
Blo02g00954 Blo-Chr2:36967719 Blo03g00087 Blo-Chr3:2932799 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00087 K09490 - jre:109002071 1213.36