Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00092 ATGTTTCGATGCATAGTATGTACGCAACAAACTGCGGATGACGGCGGCGAGAAGCGGGAGGCGGGTGGAAGTACGACGCCCAGTTCAAAGGAAGCTGTCAAAAGCCTGAGGACGCAGATAAAGGATATGGCATTGAAATTCTCTGGCGCTCATCGACAGGGCAAACCATGCTCAGGTCCAAGTAGTTACAAAAAAGGACAGAGACCTTACCCAGACTTCGATACCGCTTCAGAAGGGATTCCATATCCATTCTTCGGAGGTGCAAGTTCGAGTTCTACCCCTGCATGGGATTTCACAAGTGCTAGTCGCCACCCTGCTGCAAGATGTGATGAAGAACTTGTATCTGCTAGTGATGTTTTGCTTGATAATGAGAATGAGCCCAAAGAATGGATGGCACAGGTGGAGCCAGGAGTGCACATTACGTTTGTGTCTCTTCCACATGGGGGTAATGATCTAAGACGAATTCGCTTCAGCCGAGAAATGTTTAATAAATGGCAAGCTCAGAGATGGTGGGGCGAGAACTATGACCGGATAATGGAGCTCTATAATGTACAAAGATTTAATCGACAAGCTCTTCATACTCCACCAAGGTCTGAAGATGAGAGAGATTCATCTTACTCAATGATTGCATCTGCTCGGGAGAGTCCCATGACATCTTCAGCACACAAGGAATGGGTACATAGGACCAAGAGTGGTGGCCATAACTACAACTCTGGGCTTAGTTCTTATGGTGCAGGCTGTCACAAAGGAGATGTTTCATCTTTTGAAGCATCAAGGACGACCACCTCTTCTAGAGATGAAGCTTCAGTCTCCGTCAGCAATGCCAGTGACCTAGAGGGAGAGTGGGTGGAAGAAGATGAGCCGGGAGTTTACATTACAATCAGACAGCTAGCTGACGTCGGGAAAAGTTTGGAGAGACAAATGCCAAGCTGTGGTGGGAAGAGAATAGAGAGAGAATACAAGCTCAGTACCTTTGAATTTGGCTACACGAGGAAGAAGAAGAAGAAGATAAGTTCCAAATTTTTTGTCTGGGTGTACATGAATATTACTGTATACTACAACAATTCGCTTGGTAAGAAGTGGAAAACAAGAAGAATTATATGCAAAATGGATGACTTTGCACAGACAGCAACCACTTCAGATGTCATCTCAGGAGATATGATTTTTGAGCCTATTTTGGAGGAAGGTGTATTTAGATTTGACTGGTCTGCTGATGGTAGGACTGAGGCATATCCAAGTTGTTCTTTTGTAAATAGCAAGGATCGGGATATTCCAATCAGTAGCAAGAAGGATCCTCTCTACATTCCTACTTTCAAGTGCCGATTTGGGCAGCAAATTGTTAAGCTTGAGCTTCCTACTGGTTCCAACTTTTATGGAACTGGAGAAAGTAGTGGGTCTCTTGAACGCACTGGAAAAAGAATTTTTACTTGGAATTCGGATGCATGGGGATATGGTTCTGGAACCACATCTTTGTATCAGTCACATCCTTGGGTGCTAGCTGTTCTTCCAAGTGGGGAGGCGCTAGGGATTCTCGCTGATACAACAAGACGTTGTGAGATTGATCTGAGACAAGAATCAAGAATACAGTTTGTTTCTCTAGCCTCGTATCCTGTTATTACCTTTGGTCCTTATGCTTCACCAGCTGATGTTGTTGTTTCTTTATCTCACGCAATTGGATCTGTATTTATGCCTCCAAAGTGGTCTTTAGGCTATCAACAATGTCGTTGGAGCTACAATTCTGCTGGGCGAGTTCTTGAGATTGCAACAACATTTCGTGAGAAAGGTATTCCTTGTGATGTCATATGGATGGATATTGATTACATGGATGGATTTCGTTGCTTCACTTTTGACAAGGTGCGTTTCTCAGATCCGAAATCTTTAGTGATGAATCTTCATAAAAAGGGTTTCAAAGCTGTATGGATGCTTGACCCTGGAATAAAAAAAGAAAAGGGATATTTTATCTATGACAGTGGCTGTGTGAATGATGTATGGGTGAAAAAGGAAGATGGGAAACCATTTGCTGGTGAAGTTTGGCCTGGCTCTTGTGTTTTCCCTGACTTCACACAGGCAAAAGTTCGTTCTTGGTGGGTTAACTTAGTCAAAGGTTTTACTCTTCATGGTGTTGATGGTATATGGAATGATATGAATGAACCGGCTATTCTCAAGTCAGTAACAAAGACTATGCCTGAAAGCAACATTCATAAAGGAGATGAAGAACTTGGAGGCTGTCAGAACCATTCTTTTTATCACAATGTGTATGGCATGCTGATGGCAAGGTCAACATATGAAGGTATGCAGTTGGCTGATGGTAGTAAACGTCCATTTGTTCTTACAAGAGCTGGTTTTGTGGGTAGCCAAAGGTATGCTGCAACATGGACTGGCGATAACCAATCAAATTGGGAGCATCTGCATATGAGCATCTCCATGGTACTTCAGTTGGGACTTAGTGGTCAACCGTTCTCTGGACCTGATATTGGTGGATTTGCTGGAAATGCAACTCCTAAGCTTTTCGGAAGGTGGATGGGAGTTGGTGCTATGTTTCCATTTTGTCGAGGACATTCTGAATCTGGCACAGCCGACCATGAACCTTGGTCTTTTGGAGCAGAGTGCGAAGAAGTTTGCCGCAGGGCGATAATGAGACGCTACCGCATTATCCCACATATGTACACTCTTTTCTATATTGCTCATACAACTGGTACTCCAGTTATAACTCCTACCTTTTTTGCTGATCCAAAAGATCCTAGCTTGAGGAAGCTTGAAAATTCATTTATGTTGGGACCACTCTTGGTCTGCTCGAGTACTTCAGCAGATCAAGAATTGGATAGCTTGCATTGTGTATTGCCCAAAGGAATTTGGTTGCCTTTTGATTTTGATGATTCACATGCGGATTTACCAGCATTATACTTGAAAGGTGGATCAATTATTCCTTTAGGTCCTCCGCACCAGCAAACTGGGGAAGCAAATCTTTCGGATGACTTGTTGCTTCTTGTGGCTTTGGATGAAAAGGGGCATGCTGAAGGTGTTCTTTACGAAGACGATGGTGATGGATATGAATTCACCAAAGGAGGATATCTAATGACTTATTATGTGGCAGAATTCAATTCATCATTTGTCAGTGTTCAAGTTTCCAAAACTGAAGGCACCTGGAAAAGGCCAAAGCGGAGATTGCATGTTCAATTGTTATTAGGCGGATACGCTATGATTGACGCATGGGGTATTGATGGAGAAATTGTGGAAGTTAAAATGCCTTCTCAAAAAGATGTGACTGAGCTGGTAACTATCAGTGAGAGGCATTATAAGACACAATTGGAAAGTGCCAAGCGTATACCAGATGTGGGAGATGTTTCCTCCAATAAGGGAGCTGAACTTTCTAAAATTCCAATTGAACTGAGAGCTGGCAGTTGGTTTATTGAAGTTGTCCCCTGGATTGGAGGCAGAATAATTTCAATGGCACACCTTCCATCAGGAACACAGTGGCTCCATAGCAGAATTGAAATTAATGGGTATGAGGAGTACAGTGGCACTGAATATCGTTCAGCTGGATGTACTGAGGAATATACAGTAGTGGAGATGAATCTTGAGCCTGCAGGAGAGAATGGGTCGGTTTTGCTCGAAGGCGATATTGGTGGAGGATTAGTTTTTAGACGCCAAATCTGTATACCGAAGGAGACACCTGAGGTTCTACAAATTCACTCAAATATTATAGCCAGCAATGTCGGAGCTGGTTCTGATGGGTTTTCAAGGCTGGTTTGCATAAGGGTGCACCCAATCTTTACTCTCCTGCATCCTACAGAATCTTACGTATCATTCACCTCAATGGATGGGTCCGAGCACGAGATATGGCCAGACTCTGGGGAGCAATTTTTCGAAGGCAATCTTCTACCCAATGGCCAATGGATGCTCGTTGACAAATGCGTGGGCTTGGCATTAGTTAACAGATTCGATGTAGGGGAGGTGTGCAAGTGCCTCGTCCATTGGGGAACAGGAACAGTCAACTTGGAGCTATGGTCTGAAAGCAGGCCTGTTTCCAAGCAATCTCCTCTCACTATTTCTCACAAGTATGAGGTGGTACCAATTTCTTAA 4083 43.62 MFRCIVCTQQTADDGGEKREAGGSTTPSSKEAVKSLRTQIKDMALKFSGAHRQGKPCSGPSSYKKGQRPYPDFDTASEGIPYPFFGGASSSSTPAWDFTSASRHPAARCDEELVSASDVLLDNENEPKEWMAQVEPGVHITFVSLPHGGNDLRRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDERDSSYSMIASARESPMTSSAHKEWVHRTKSGGHNYNSGLSSYGAGCHKGDVSSFEASRTTTSSRDEASVSVSNASDLEGEWVEEDEPGVYITIRQLADVGKSLERQMPSCGGKRIEREYKLSTFEFGYTRKKKKKISSKFFVWVYMNITVYYNNSLGKKWKTRRIICKMDDFAQTATTSDVISGDMIFEPILEEGVFRFDWSADGRTEAYPSCSFVNSKDRDIPISSKKDPLYIPTFKCRFGQQIVKLELPTGSNFYGTGESSGSLERTGKRIFTWNSDAWGYGSGTTSLYQSHPWVLAVLPSGEALGILADTTRRCEIDLRQESRIQFVSLASYPVITFGPYASPADVVVSLSHAIGSVFMPPKWSLGYQQCRWSYNSAGRVLEIATTFREKGIPCDVIWMDIDYMDGFRCFTFDKVRFSDPKSLVMNLHKKGFKAVWMLDPGIKKEKGYFIYDSGCVNDVWVKKEDGKPFAGEVWPGSCVFPDFTQAKVRSWWVNLVKGFTLHGVDGIWNDMNEPAILKSVTKTMPESNIHKGDEELGGCQNHSFYHNVYGMLMARSTYEGMQLADGSKRPFVLTRAGFVGSQRYAATWTGDNQSNWEHLHMSISMVLQLGLSGQPFSGPDIGGFAGNATPKLFGRWMGVGAMFPFCRGHSESGTADHEPWSFGAECEEVCRRAIMRRYRIIPHMYTLFYIAHTTGTPVITPTFFADPKDPSLRKLENSFMLGPLLVCSSTSADQELDSLHCVLPKGIWLPFDFDDSHADLPALYLKGGSIIPLGPPHQQTGEANLSDDLLLLVALDEKGHAEGVLYEDDGDGYEFTKGGYLMTYYVAEFNSSFVSVQVSKTEGTWKRPKRRLHVQLLLGGYAMIDAWGIDGEIVEVKMPSQKDVTELVTISERHYKTQLESAKRIPDVGDVSSNKGAELSKIPIELRAGSWFIEVVPWIGGRIISMAHLPSGTQWLHSRIEINGYEEYSGTEYRSAGCTEEYTVVEMNLEPAGENGSVLLEGDIGGGLVFRRQICIPKETPEVLQIHSNIIASNVGAGSDGFSRLVCIRVHPIFTLLHPTESYVSFTSMDGSEHEIWPDSGEQFFEGNLLPNGQWMLVDKCVGLALVNRFDVGEVCKCLVHWGTGTVNLELWSESRPVSKQSPLTISHKYEVVPIS 1360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3083496 3106224 - BLOR11273 Blo03g00092 57556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00092 1360 Pfam Transcription factor BRX N-terminal domain 24 57 IPR027988 -
Blo03g00092 1360 Gene3D Glycosidases 547 901 - -
Blo03g00092 1360 PANTHER ALPHA-GLUCOSIDASE 378 1357 - -
Blo03g00092 1360 MobiDBLite consensus disorder prediction 47 67 - -
Blo03g00092 1360 ProSitePatterns Glycosyl hydrolases family 31 active site. 710 717 IPR030458 -
Blo03g00092 1360 PANTHER - 378 1357 - -
Blo03g00092 1360 CDD GH31_glucosidase_II_MalA 559 899 - -
Blo03g00092 1360 CDD GH31_N 437 559 - -
Blo03g00092 1360 Gene3D - 976 1105 IPR013780 -
Blo03g00092 1360 SUPERFAMILY (Trans)glycosidases 554 900 IPR017853 -
Blo03g00092 1360 Pfam Galactose mutarotase-like 455 521 IPR025887 -
Blo03g00092 1360 Pfam Domain of unknown function (DUF5110) 995 1061 IPR033403 -
Blo03g00092 1360 Pfam Transcription factor regulating root and shoot growth via Pin3 128 182 IPR013591 -
Blo03g00092 1360 SUPERFAMILY Galactose mutarotase-like 414 530 IPR011013 GO:0003824|GO:0005975|GO:0030246
Blo03g00092 1360 Gene3D - 902 975 IPR013780 -
Blo03g00092 1360 ProSiteProfiles BRX domain profile. 128 183 IPR013591 -
Blo03g00092 1360 Gene3D glycosyl hydrolase (family 31) 411 541 - -
Blo03g00092 1360 Pfam Glycosyl hydrolases family 31 546 975 IPR000322 GO:0004553|GO:0005975
Blo03g00092 1360 SUPERFAMILY Glycosyl hydrolase domain 901 958 - -
Blo03g00092 1360 MobiDBLite consensus disorder prediction 12 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00092 Blo-Chr3:3083496 Blo16g00553 Blo-Chr16:22683528 1.52E-85 dispersed
Blo03g00092 Blo-Chr3:3083496 Blo19g00147 Blo-Chr19:5144319 8.59E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00092 - - qlo:115976023 1621.68