Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00109 ATGGTCTTGAAGCATCATTCACCGGGCAACAGATCACGGGGCCCCATTTCTATTTTTGCCGTCATTGGTCTGTGCTGCTTCTTCTACATTTTGGGAGCATGGCAAAGGAGCGGATTTGGAAAAGGAGATCGTATTGCAATGTCGGTCTCAAAGCAAACAGATTGCAAGATAATCAAAGATTTAGATTTAGATTTTGAATCTCATCACAACATGGTAGAGATTCCCAAATCTTCCGTGCCAAAATCGGAGGTGTTTAAGCCGTGCGATGTGAGTTACAAAGATTACACGCCCTGTCAAGAACAAGATCGAGCTATGAAATTCCCAAGAGGAAATATGAATTATAGAGAAAGGCATTGTCCTCCTGACGGAGAAAAGCTGCATTGTCTTGTTCCAGCACCAAAGGGGTATAAAACTCCATTTCCATGGCCGAAGGGTCGAGATTATGTTCACTATGCTAATGTTCCTTACAAGAATCTAACGATCGACAAAGCTGCCCAAAATTGGGTACAGTTTCAGGGAGATGTATTCAAATTTCCGGGTGGTGGTACTATGTTTCCTCAAGGGGCCGATGCTTATATCGATGAACTAGCAACTGTTATCCCAATGTCTGATAGTTCCGTTAGAACTGCCCTCGATACTGGTTGTGGAGTTGCAAGCTGGGGAGCATACTTGATGAAAAGAAATGTATTGCCCATTTCCTTCGCACCGAGAGACAATCATGAAGCACAAGTCCAATTTGCATTGGAGAGAGGTGTGCCTGCTTTTATTGGCGTTCTCGGTACAATTCGTCTTCCATTTCCATCACGGGCCTTTGATATGGCTCAGTGCTCTCGATGCCTTATCCCTTGGACTTCAAATGATGGTATGTATCTGATGGAGGTCGACCGGGTCCTTAGACCGGGTGGATATTGGATCTTGTCGGGTCCTCCAATTAACTGGAAAACCTACTACAAGACTTGGAAGCGAACGAAGGCAGATCTCAGGGCGGAGCAGAAGAGCATAGAAGATCTGGCAGATCTTCTATGCTGGGAGAAAAAGTACGAGAAAGGAGATATTGCAATCTGGAGAAAGAAAATAAACGATAAATCTTGCCAAAGCAAGTCTCGAAATATTTGTGAAGCAAAAGATTCCGACGATGTCTGGTACCAGAAAATGGAAACGTGCATTACTCCCTTCCGGGACGTAATGAATGACGATGAAGTCTCCGGCGGGAAATTAGAGAGGTTTCCAATGAGACTTTATTCAATTCCTCCAAGAATTTCTGCAGGATTAGTTCCTGGCGTTACAGATGACATGTACCAAGAAGACAATAAACTTTGGATAAAGCGATTAAATTTCTACCAAAAGATCAATAAGATAATCGGATCTGCTAGAATCAGGAATGTGATGGATATGAATGCAGGCCTCGGTGGATTTGCAGCGGCCATTCACTCGAAAAGATCTTGGACAATGAATGTGGTCCCCACAATTGCTAATAACACTTTAGGGGTCGTTTACGAGAGAGGTCTTACCGGCATGTATCACGACTGGTGCGAAGGCTTCTCTACGTACCCGAGAACGTATGACTTTATTCACGGCAGTGGTGTCTTCAGCTTGTATCAGGATAAGTGCAATTTGGAGGACATACTCTTGGAAATGGATCGGATACTGAGGCCGGAAGGGACGGTAATTCTCCGAGACGAAGTCGATGCCTTGGCGAAGGTCGTGGAAATAGCATCAGGCATGAGATGGGATGTCAAAATGATGGATCACGAGGACGGACCGCTTGTGCCGGAGAAGATAGTGGTTGCTGTAAAACAATATTGGGTCGCCGGAGACAGTTAG 1824 44.79 MVLKHHSPGNRSRGPISIFAVIGLCCFFYILGAWQRSGFGKGDRIAMSVSKQTDCKIIKDLDLDFESHHNMVEIPKSSVPKSEVFKPCDVSYKDYTPCQEQDRAMKFPRGNMNYRERHCPPDGEKLHCLVPAPKGYKTPFPWPKGRDYVHYANVPYKNLTIDKAAQNWVQFQGDVFKFPGGGTMFPQGADAYIDELATVIPMSDSSVRTALDTGCGVASWGAYLMKRNVLPISFAPRDNHEAQVQFALERGVPAFIGVLGTIRLPFPSRAFDMAQCSRCLIPWTSNDGMYLMEVDRVLRPGGYWILSGPPINWKTYYKTWKRTKADLRAEQKSIEDLADLLCWEKKYEKGDIAIWRKKINDKSCQSKSRNICEAKDSDDVWYQKMETCITPFRDVMNDDEVSGGKLERFPMRLYSIPPRISAGLVPGVTDDMYQEDNKLWIKRLNFYQKINKIIGSARIRNVMDMNAGLGGFAAAIHSKRSWTMNVVPTIANNTLGVVYERGLTGMYHDWCEGFSTYPRTYDFIHGSGVFSLYQDKCNLEDILLEMDRILRPEGTVILRDEVDALAKVVEIASGMRWDVKMMDHEDGPLVPEKIVVAVKQYWVAGDS 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3394927 3398098 + BLOR11290 Blo03g00109 57573

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00109 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 599 IPR004159 GO:0008168
Blo03g00109 607 PANTHER METHYLTRANSFERASE PMT14-RELATED 6 604 - -
Blo03g00109 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 436 561 IPR029063 -
Blo03g00109 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 6 604 IPR004159 GO:0008168
Blo03g00109 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 321 IPR029063 -
Blo03g00109 607 Gene3D Vaccinia Virus protein VP39 189 377 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00109 - - - vvi:100266059 1013.83
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00109 Blo-Chr3:3394927 Blo16g00188 Blo-Chr16:4242243 0 dispersed
Blo03g00109 Blo-Chr3:3394927 Blo11g00770 Blo-Chr11:11043836 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g608 . Blo03g00109 . . . Bpe07g00228 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone12ag0602 . . . . . . . . . . . . Bma05g00394 Bma12g00228 . . . . . . Car16g01026 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005581 1 2 1 3 1 1 2 1 1 1 1 1 2 1 1 2 1 2 0 1 1 1 1 1 1 1 1 3 3 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00109 Blo_Chr03 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0