Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00111 ATGAGAACAAGGCGAGGAAAACGATCCGAGGCTTTTTGGCCTTCATTGATGATGAAGAAATGGCTGAATATCAAGCCTAAGGTGTATGATTTCAGTGAGGATGAGATCGACACCGAAACAGAAAGCGAAGATGATGCTTCATCTCTCAAGGATGCAAGAATTGATGCGGATGAAGACCATATGCGCAGAATACAGGGGAACAAATTTGTCTGCTCAACCCATGTTCCAGGCAATAATTTTCATTCAGGCTGGTTAACTATTTATACTCCTAAGAGCTATCCGGTCAGGCACCGTAGAGGAAAATCAGAGACTCTGAGAGTTCAATACATAAATACAAAGGATCTGAGGGTTACGATAGGCACTTGGAACGTTGCCGGACAATCCCCATGCGAAGACCTTGCATTAGACGATTGGCTTTGTACAGAGGAGCCAGCAGATTTATATATAATTGGTTTTCAGGAGGTTGTTCCTTTGAATGCTGGGAATGTGCTAGGAGCGGAGGATAGCCGGCCGATTCCGAAGTGGGAGGCGATCATTCGAAGAACTTTGAACAAGTCTTTCGAGCCTGAAAGCAAACACAAAAGCTATAGTGCACCGCCTTCTCCTGTTATGAGGACATCTTCTGTTGCAGATGTACTTGCAGATGAGGCCATTGATAATCAATTAGACTTGATGAACGAAGAATTTGACCTGGAACAGCATGGTTTAACTACCAGAAATCTACAGTTGAAAAGGATTTATGGCATTGATTCCGATTGTGGATTGGACTGGCCTGAGCAGTCATTAGATTCAGTTCCTGAAGTTCTCTCCTCAAATTCAAAACTCCGACGAGTATTCAGCAGCTCTGCTAGAATAGGCTTCAATTCATCTGAGAATCCTCCGCCCTTTGGTCCTCATCAATTTTCATTAAATGCTGGCAGGCTAAGAAGATCCTACCATAGCTCAGGAAACTTGGCATCGATCTTGAAGGAACAGCAAGAGAGGGAAGAAGTGATCGAATCTCTCTCTCATTTGAGTGATAGCTTATTTGAAGAGGAAGATGATGCTTTCTCAGAAGGGCTCATGGAGGAGGAAAATGGTGGATTTGCTACTACAGGTGGAGCAAAATCACGTCCTAAATATGTTCGTATAGTTGGAAAGCAGATGGTGGGGATATATGTGTCGGTTTGGGTGCGCAAGAGGTTGCGAAGACACATAAACAATTTGAAAGTTTCTCCCGTTGGGATTGGTCTGATGGGTTACTTGGGAAATAAGGGATCTGTTTCTATTAGCATGTCCCTTTTTCAATCAAGGCTGTGTTTTGTTTGTTCTCATCTAACATCTGGTCAGAAAGATGGGGCTGATCAGAAGCGAAATGCAGATGTGAATGAAATAATAAGGCGGACCCGTTTTTCGTCTGTCTTCGATGCAGAATCAGATCAACCTCAGACCATCCCGTGTCACGACAAGATATTCTGGTTTGGAGATCTCAACTATCGACTTAATATGCCGGATTCAGACATAAGGCAACTCGTAAACCTAAAACAGTGGGATGAACTCATAAACTATGATCAGCTTAGCAGAGAACTTCACAATGGGCGTGTATTCGAGGGATGGAAAGAGGGAGCTATAGACTTCCCACCTACTTATAAATATGATATCAACTCCACCAGATATGTTGGAGAGAATCCGAAAGAGGGAGAGAAGAAAAGATCTCCAGCTTGGTGTGACCGGATACTATGGCTTGGAAAGGGAATAAAACAGCTCTGTTACAAGCGATCTGAGATTCAACTCTCGGATCATCGGCCAGTCAGTTCAATCTTTGTGGCAGAAGTTGAAGTTTTAGACCGACGAAAGCTGCAAAGAGCGCTTAACATCACAAGCGCAGCAGTTCATCCTGAAATTTTCTTCCAAGAAAATGAGGAAAGAAGATAA 1914 43.31 MRTRRGKRSEAFWPSLMMKKWLNIKPKVYDFSEDEIDTETESEDDASSLKDARIDADEDHMRRIQGNKFVCSTHVPGNNFHSGWLTIYTPKSYPVRHRRGKSETLRVQYINTKDLRVTIGTWNVAGQSPCEDLALDDWLCTEEPADLYIIGFQEVVPLNAGNVLGAEDSRPIPKWEAIIRRTLNKSFEPESKHKSYSAPPSPVMRTSSVADVLADEAIDNQLDLMNEEFDLEQHGLTTRNLQLKRIYGIDSDCGLDWPEQSLDSVPEVLSSNSKLRRVFSSSARIGFNSSENPPPFGPHQFSLNAGRLRRSYHSSGNLASILKEQQEREEVIESLSHLSDSLFEEEDDAFSEGLMEEENGGFATTGGAKSRPKYVRIVGKQMVGIYVSVWVRKRLRRHINNLKVSPVGIGLMGYLGNKGSVSISMSLFQSRLCFVCSHLTSGQKDGADQKRNADVNEIIRRTRFSSVFDAESDQPQTIPCHDKIFWFGDLNYRLNMPDSDIRQLVNLKQWDELINYDQLSRELHNGRVFEGWKEGAIDFPPTYKYDINSTRYVGENPKEGEKKRSPAWCDRILWLGKGIKQLCYKRSEIQLSDHRPVSSIFVAEVEVLDRRKLQRALNITSAAVHPEIFFQENEERR 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3456372 3460439 + BLOR11292 Blo03g00111 57575

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00111 637 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 632 - -
Blo03g00111 637 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 632 IPR045849 GO:0004445|GO:0046855
Blo03g00111 637 SMART i5p_5 294 609 IPR000300 GO:0016791|GO:0046856
Blo03g00111 637 Gene3D Endonuclease/exonuclease/phosphatase 97 204 IPR036691 -
Blo03g00111 637 Gene3D Endonuclease/exonuclease/phosphatase 312 629 IPR036691 -
Blo03g00111 637 SUPERFAMILY DNase I-like 107 620 IPR036691 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00111 K24221 IP5P1_2; type I inositol polyphosphate 5-phosphatase IP5P1/2 [EC:3.1.3.56] - tcc:18606093 902.508
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00111 Blo-Chr3:3456372 Blo17g00132 Blo-Chr17:1216386 2.06E-146 dispersed
Blo03g00111 Blo-Chr3:3456372 Blo18g00144 Blo-Chr18:1328510 1.30E-166 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g605 . Blo03g00111 Bda06g01281 . . Bpe07g00226 . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0619 Cone12ag0604 . . . . . . . . Bda07g00843 . . . . Bma12g00225 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004106 1 6 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 6 3 1 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00111 Blo_Chr03 FPKM 0.237276 0.215155 1192.158691 1146.670532 266.288666 294.714447 277.352112 0.407129 0.210348 0.0