Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00114 ATGGGAAGTGGACTTTCCAGCCTCGTCTCCTGTCTGAAACCGGCCGACCGGACGACTACTCACGCCGACCATAATTCGCACCACCATCAGGATGTCCTCTTCGCCGCCTCTGAGCCTCTTGATGAAACCCTAGGCCATTCCTTCTGTTACGTTAGGTCTTCGTCTCGCTTCCTCTCCCCAACTCACTCCGATCGCTTTCTGTCTCCTTCTCATTCTCTCCGTTTCTCCCCTCCTCACGAACCGGCGGTGCAGAGGGCTCGACCGCCGCCGCCGGAGACTGGGTTCAAGGCCATTTCCGGAGCTTCGGTGAGTGCGAATAGCTCTACTTCCAGATCTGTCCTCCTGCTTGATAATATTTACGACGATGCCACTGAAAGTACGCTTGGTACTGGTGGAGGAGGCGGCGGTGTGAGGGGGAGCATCGTCAATGGCTTCGAGAGTACGCCTTCATTTTGCGCTCTTCCTCTTCAGCCGGTTCCGAGAGGTGGAGCGGAGCCGTCCGGTCCAATGGAGCGGAGTGGCTTCTTTCTCTCTGGTCCAATCGAACGCAGCGCTCTTTCTGGTCCACTGGATGCCAACGCTGCCTCTGATGGAAGTGGGAGAGTTCACTTTTCGGCTCCGCTAGGCGGACTTTATCTGAAAAAAAGACGGAAGAAGAGCATTATGGGGATTCGGAAGGCGTTCTACCGGAACTTCTCAGAGAAGCGGCCGTGGGTGGTGCCCGTGCTCAATTTCGCTGGCCGAAAGGAGGGTGGGGCTGCTGGAGATGAGTCGGAGCTGAAGCATGAGAGTAATGTTCAATGGGCACTCGGGAAGGCCGGAGAGGATCGGGTGCATGTGGTTGTATCGGAAGAACAAGGGTGGTTGTTTGTTGGGATTTATGACGGATTCAATGGCCCTGATGCTCCCGAATTTTTGATGGGTAATCTTTATCGGGCAGTATATAATGAGCTTCAGGGGTTATTTTGGGAGGTTGAAGAGCCAGAGGAGCCTCCTAATGTTACTCAGCCAAACGCAATTGCAGAAAATGCATCAACGAAAGATGCTGAGGAAGTAGTTGAAAAAGGCAGTGATGTTTCATTAGTGTGTAATAATTCAGACCCTCCCGCTGCTGGACCAGCCAAGAGAGTAACATTTCAATCCGAGGAAGGATCAGAATCTAGAAGGAGAAGGCGACTTTGGGAATTCTTGGCCGAAGATGATCCTGAATATGGGCTTGATCTTTCAGGATCGGATAGATTTGCATTTTCAGTTGATGAAGCTCTTAGTGTAAGCAATGCAGGTTCTACGGCAGGAAGGCAGTGGCTTCTGTTGTCAAGATTGAAACATGGGTGGTCTAAGCACAAGGAAGGTCATGTTAGGAAGTTGTTTTCATGGAGTTTTAGATTGGAGGACAAAGAGAAGGTTGAGGTTGAGAATAAGGTAGAGGATAAGCCATTTCAGACTGGTAAGAGGCGGAAGGAGGGTCCTGTGGATCATGAGTTGGTTTTGGGAGCATTATCGCGGGCTTTGGAAGTAACTGAGTTAGCTTACTTGGATATGACAGACAAGGTACTGGATACTAATCCAGAGCTTGCATTAATGGGTTCTTGCTTGTTAGCTGTGTTAATGAGAGATGAGGATGTTTATGTCATGAATGTTGGTGATAGTCGTGCAATTGTTGCCCAATATGAAACTCAAGAAGTTGGTCGTGGTGAGGAGTTGGCGAAGACAGGAGAAGAGAGATCTTCTATGAAAGGTAAAATGGAGGAATCATCAGCTCCAAGCGTAAGGGAGAATGCTAAAGAAATTACACAGGGAAATGAGTCTTCTTATCAAGGGATGAGTTTGGTCGCATTGCAGCTATCAACTGATCACAGCACAAGCATTGAAGATGAAGTCATAAGGATAAAGAACGAACATCCAGATGACAAACACTGTATTGTTAATGATAGAGTGAAAGGTCGTCTCAAGGTTACAAGGGCATTCGGTGCTGGATTTCTTAAACAGCCAAAGTTGAATGCTGCATTATTGGAAATGTTTCGTAATGAATACATCGGCACTGCACCATACCTATCCTGCTTGCCTTCTCTTCGGCACCACAGACTTTGTCCAATGGATCAGTTCTTAGTCCTCTCGTCTGACGGTCTATACCAGTATCTAAGCAATCAGGAAGTGGTTTCCCATGTGGAAAATTTTATGGAGAAGTTTACAGATGGAGACCCTGCTCAACACTTAATAGAGGAGCTTCTATCCCGTGCAGCCAAAAAAGCCGGGATGGATTTTCATGAATTATTGGACATTCCCCAAGGAGATCGTCGAAAATATCACGACGACGTAACTGTGATGGTTGTTTCGCTCGAGGGAAGAATTTGGAAATCTTCAGGAAAGTACCCTTGA 2379 48.05 MGSGLSSLVSCLKPADRTTTHADHNSHHHQDVLFAASEPLDETLGHSFCYVRSSSRFLSPTHSDRFLSPSHSLRFSPPHEPAVQRARPPPPETGFKAISGASVSANSSTSRSVLLLDNIYDDATESTLGTGGGGGGVRGSIVNGFESTPSFCALPLQPVPRGGAEPSGPMERSGFFLSGPIERSALSGPLDANAASDGSGRVHFSAPLGGLYLKKRRKKSIMGIRKAFYRNFSEKRPWVVPVLNFAGRKEGGAAGDESELKHESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVYNELQGLFWEVEEPEEPPNVTQPNAIAENASTKDAEEVVEKGSDVSLVCNNSDPPAAGPAKRVTFQSEEGSESRRRRRLWEFLAEDDPEYGLDLSGSDRFAFSVDEALSVSNAGSTAGRQWLLLSRLKHGWSKHKEGHVRKLFSWSFRLEDKEKVEVENKVEDKPFQTGKRRKEGPVDHELVLGALSRALEVTELAYLDMTDKVLDTNPELALMGSCLLAVLMRDEDVYVMNVGDSRAIVAQYETQEVGRGEELAKTGEERSSMKGKMEESSAPSVRENAKEITQGNESSYQGMSLVALQLSTDHSTSIEDEVIRIKNEHPDDKHCIVNDRVKGRLKVTRAFGAGFLKQPKLNAALLEMFRNEYIGTAPYLSCLPSLRHHRLCPMDQFLVLSSDGLYQYLSNQEVVSHVENFMEKFTDGDPAQHLIEELLSRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVVSLEGRIWKSSGKYP 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3492334 3497011 + BLOR11295 Blo03g00114 57578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00114 792 PANTHER PROTEIN PHOSPHATASE 2C 29 25 790 - -
Blo03g00114 792 SUPERFAMILY PP2C-like 271 781 IPR036457 -
Blo03g00114 792 ProSiteProfiles PPM-type phosphatase domain profile. 260 780 IPR001932 -
Blo03g00114 792 SMART PP2C_4 259 778 IPR001932 -
Blo03g00114 792 CDD PP2Cc 492 780 IPR001932 -
Blo03g00114 792 MobiDBLite consensus disorder prediction 564 590 - -
Blo03g00114 792 MobiDBLite consensus disorder prediction 564 601 - -
Blo03g00114 792 Pfam Protein phosphatase 2C 614 749 IPR001932 -
Blo03g00114 792 Gene3D - 433 787 IPR036457 -
Blo03g00114 792 Gene3D - 248 432 IPR036457 -
Blo03g00114 792 MobiDBLite consensus disorder prediction 72 102 - -
Blo03g00114 792 PANTHER PROTEIN PHOSPHATASE 2C 25 790 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00999 Blo-Chr2:38709156 Blo03g00114 Blo-Chr3:3492334 0 dispersed
Blo03g00114 Blo-Chr3:3492334 Blo13g01076 Blo-Chr13:32921604 2.44E-168 dispersed
Blo03g00114 Blo-Chr3:3492334 Blo14g00118 Blo-Chr14:854121 2.55E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00114 - - bhj:120092087 1109.75