Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00120 ATGGAAGCTCTGTTCTCTAACGATTTCTTCAACTTCATAATCTCTGACACTATCTCTGCAACCCCACATTGTTCTCCAGACAATTCCAGCAGCACCAAATTCTTCCTAGAAGCTAGTTTTGAACCTCATGGCCAAGCAGTTTTGACAGATAGCTGCTCGTCGAAAGTAGGAAAAAGCCTTCCGTGCAGGCCGGAAAACGGCGATAGCGGCCGGAATCCCGGGGGGCGAGGGAGAAAAAAAAGGAGGAGCAGGGTGAGAGTGTTTAAGAACAAAGAGGCAGTGGAAACTCAAAGGATGACTCACATTGCTATGGAAAGAAAGAGACGGAAGCAAATGAATGAGCATTTTGCTGCCTTGCGTTCTCTCATGCCTCAATCTTATGCTCAAAGGGGTGATCAAGCCTCGATAGTAGGGGGCGCCATACAGTTTGTGAAGCAGCTTGAGCATCTCCTGCAGACCCTTGAAGCTCAAAAGCTGCAACTTGATCAAGAAAAATTATCGCAAGATCAAAGCCAAATCGAAGAGAAAATTGACAAAGAAATGATATTTTCACCTCCTTTCTCACAGTTCTTTGTGAACCCACAATTCAATTGGTCTCAAAACCCTAAAAAAACTCCACCAACATCTAATGCCATAGCCATGGCTGATGTGGAAGTGACCTTGGTTGAAACCCATGCAAATCTCAGAATCCTCTCCAGAAAAAGCCCTAGAAATCTCTCCTCTTTGGTTGCTGGTTGTCAGGCTCTCTATTTTACTGTTCTTCATCTCAATGTCACCACCATGAACTCTCTTGTTCTTTACTCTATTAGTGCCAAGGCCTGTCATGACCCTAAGGGACTAGAGACAAAACGACCTGGCCTACGAAAGGACTGA 873 45.02 MEALFSNDFFNFIISDTISATPHCSPDNSSSTKFFLEASFEPHGQAVLTDSCSSKVGKSLPCRPENGDSGRNPGGRGRKKRRSRVRVFKNKEAVETQRMTHIAMERKRRKQMNEHFAALRSLMPQSYAQRGDQASIVGGAIQFVKQLEHLLQTLEAQKLQLDQEKLSQDQSQIEEKIDKEMIFSPPFSQFFVNPQFNWSQNPKKTPPTSNAIAMADVEVTLVETHANLRILSRKSPRNLSSLVAGCQALYFTVLHLNVTTMNSLVLYSISAKACHDPKGLETKRPGLRKD 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3557025 3559284 + BLOR11301 Blo03g00120 57584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00120 290 MobiDBLite consensus disorder prediction 55 84 - -
Blo03g00120 290 PANTHER MAX DIMERIZATION, MAD 1 273 - -
Blo03g00120 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 96 164 IPR036638 GO:0046983
Blo03g00120 290 Gene3D - 89 165 IPR036638 GO:0046983
Blo03g00120 290 PANTHER TRANSCRIPTION FACTOR BHLH71 1 273 - -
Blo03g00120 290 Coils Coil 144 176 - -
Blo03g00120 290 Pfam Helix-loop-helix DNA-binding domain 97 148 IPR011598 GO:0046983
Blo03g00120 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 147 IPR011598 GO:0046983
Blo03g00120 290 SMART finulus 102 153 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00120 Blo-Chr3:3557025 Blo07g00030 Blo-Chr7:515651 1.48E-42 dispersed
Blo02g00988 Blo-Chr2:38229496 Blo03g00120 Blo-Chr3:3557025 4.36E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12085 PF00010 HLH 2.60E-12 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00120 - - jre:108982006 281.567