Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00146 ATGTATGGACAGAGTGGTTCGTCGGACTCCGATTTGGCGCTTCTCGACTCGATTAGCCGGTATTTATTGGGAGAATCGGATTCGCATCGAGACGGTAGAGTGGTAGTTTCGGGTTCCGATCCGGTTTTCAGCCGGAGCTCCAGTTTCAGTAGCTTGTATCCTTGCCTGATGGATAATTGGGGGGAGCTGCCACTGAAAGTGGATGACTCGGAGGATATGGTACTCGCCGGAGTACTTCACGACGCCGTAAATGTCGGTTGGGTGCCCTCACTGACTTCATCGTCACCGGAAATTGGGAAATTTGAACTATCGTATGTGAATTCGGAGCCGGAGATCTTTCCTCCTCTGAACCGATTATCGGAGCAGGAGAAGGTACAACCGGTGCCGGCAGTCGTTCCGCCGAGAGGAAAGCATTACCGCGGGGTTCGACAGCGGCCGTGGGGAAAATTCGCCGCTGAAATTCGGGATCCGGCGAAGAATGGGGCAAGGGTTTGGCTCGGAACCTTCGAGACTGCTGAGGATGCAGCTTTAGCTTACGACCGAGCGGCGTATCGGATGCGTGGCGCAAAAGCCTTGCTTAACTTTCCTCTCCGGATTAACTCCGGTGAACCCGACCCGATTCGAGTGACATCTAAGCGTTCTTCGCCGGAGCCATCGTCCCCCGGGGACAGTAGATCATCACCTAAAAGGCGGAAGAAAGTGAACGCCTCGTCGCCTCCGCCGATCTCGGCTCCCCAAGAAGGGCAAATAAGTAAAATGACTGTGGTGGAAGAATTACATGTGGTAAGCCACATAATGGTGCGCCCACGTGGAGAAGAGCTATTGGTCAATTAG 834 53.84 MYGQSGSSDSDLALLDSISRYLLGESDSHRDGRVVVSGSDPVFSRSSSFSSLYPCLMDNWGELPLKVDDSEDMVLAGVLHDAVNVGWVPSLTSSSPEIGKFELSYVNSEPEIFPPLNRLSEQEKVQPVPAVVPPRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGAKALLNFPLRINSGEPDPIRVTSKRSSPEPSSPGDSRSSPKRRKKVNASSPPPISAPQEGQISKMTVVEELHVVSHIMVRPRGEELLVN 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3972006 3972839 - BLOR11327 Blo03g00146 57610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00146 277 Pfam AP2 domain 138 188 IPR001471 GO:0003700|GO:0006355
Blo03g00146 277 PRINTS Ethylene responsive element binding protein signature 162 178 IPR001471 GO:0003700|GO:0006355
Blo03g00146 277 PRINTS Ethylene responsive element binding protein signature 139 150 IPR001471 GO:0003700|GO:0006355
Blo03g00146 277 ProSiteProfiles AP2/ERF domain profile. 138 196 IPR001471 GO:0003700|GO:0006355
Blo03g00146 277 MobiDBLite consensus disorder prediction 203 251 - -
Blo03g00146 277 SUPERFAMILY DNA-binding domain 138 198 IPR016177 GO:0003677
Blo03g00146 277 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED 35 237 - -
Blo03g00146 277 Gene3D AP2/ERF domain 137 199 IPR036955 GO:0003700|GO:0006355
Blo03g00146 277 PANTHER DNA-BINDING DOMAIN 35 237 IPR044808 GO:0003700|GO:0009873
Blo03g00146 277 CDD AP2 137 196 IPR001471 GO:0003700|GO:0006355
Blo03g00146 277 SMART rav1_2 138 202 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00266 Blo-Chr1:3411639 Blo03g00146 Blo-Chr3:3972006 1.14E-35 dispersed
Blo03g00146 Blo-Chr3:3972006 Blo07g00494 Blo-Chr7:11623085 1.18E-51 dispersed
Blo15g00111 Blo-Chr15:921240 Blo03g00146 Blo-Chr3:3972006 1.61E-28 dispersed
Blo03g00146 Blo-Chr3:3972006 Blo03g00147 Blo-Chr3:4000497 1.29E-27 tandem
Blo02g01024 Blo-Chr2:39681459 Blo03g00146 Blo-Chr3:3972006 2.29E-143 wgd
Blo03g00146 Blo-Chr3:3972006 Blo06g01065 Blo-Chr6:34019697 1.58E-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12089 PF00847 AP2 1.80E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00146 K09286 - mnt:21406767 288.115