Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g00146 | ATGTATGGACAGAGTGGTTCGTCGGACTCCGATTTGGCGCTTCTCGACTCGATTAGCCGGTATTTATTGGGAGAATCGGATTCGCATCGAGACGGTAGAGTGGTAGTTTCGGGTTCCGATCCGGTTTTCAGCCGGAGCTCCAGTTTCAGTAGCTTGTATCCTTGCCTGATGGATAATTGGGGGGAGCTGCCACTGAAAGTGGATGACTCGGAGGATATGGTACTCGCCGGAGTACTTCACGACGCCGTAAATGTCGGTTGGGTGCCCTCACTGACTTCATCGTCACCGGAAATTGGGAAATTTGAACTATCGTATGTGAATTCGGAGCCGGAGATCTTTCCTCCTCTGAACCGATTATCGGAGCAGGAGAAGGTACAACCGGTGCCGGCAGTCGTTCCGCCGAGAGGAAAGCATTACCGCGGGGTTCGACAGCGGCCGTGGGGAAAATTCGCCGCTGAAATTCGGGATCCGGCGAAGAATGGGGCAAGGGTTTGGCTCGGAACCTTCGAGACTGCTGAGGATGCAGCTTTAGCTTACGACCGAGCGGCGTATCGGATGCGTGGCGCAAAAGCCTTGCTTAACTTTCCTCTCCGGATTAACTCCGGTGAACCCGACCCGATTCGAGTGACATCTAAGCGTTCTTCGCCGGAGCCATCGTCCCCCGGGGACAGTAGATCATCACCTAAAAGGCGGAAGAAAGTGAACGCCTCGTCGCCTCCGCCGATCTCGGCTCCCCAAGAAGGGCAAATAAGTAAAATGACTGTGGTGGAAGAATTACATGTGGTAAGCCACATAATGGTGCGCCCACGTGGAGAAGAGCTATTGGTCAATTAG | 834 | 53.84 | MYGQSGSSDSDLALLDSISRYLLGESDSHRDGRVVVSGSDPVFSRSSSFSSLYPCLMDNWGELPLKVDDSEDMVLAGVLHDAVNVGWVPSLTSSSPEIGKFELSYVNSEPEIFPPLNRLSEQEKVQPVPAVVPPRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGAKALLNFPLRINSGEPDPIRVTSKRSSPEPSSPGDSRSSPKRRKKVNASSPPPISAPQEGQISKMTVVEELHVVSHIMVRPRGEELLVN | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3972006 | 3972839 | - | BLOR11327 | Blo03g00146 | 57610 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g00146 | 277 | Pfam | AP2 domain | 138 | 188 | IPR001471 | GO:0003700|GO:0006355 | |
Blo03g00146 | 277 | PRINTS | Ethylene responsive element binding protein signature | 162 | 178 | IPR001471 | GO:0003700|GO:0006355 | |
Blo03g00146 | 277 | PRINTS | Ethylene responsive element binding protein signature | 139 | 150 | IPR001471 | GO:0003700|GO:0006355 | |
Blo03g00146 | 277 | ProSiteProfiles | AP2/ERF domain profile. | 138 | 196 | IPR001471 | GO:0003700|GO:0006355 | |
Blo03g00146 | 277 | MobiDBLite | consensus disorder prediction | 203 | 251 | - | - | |
Blo03g00146 | 277 | SUPERFAMILY | DNA-binding domain | 138 | 198 | IPR016177 | GO:0003677 | |
Blo03g00146 | 277 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1-RELATED | 35 | 237 | - | - | |
Blo03g00146 | 277 | Gene3D | AP2/ERF domain | 137 | 199 | IPR036955 | GO:0003700|GO:0006355 | |
Blo03g00146 | 277 | PANTHER | DNA-BINDING DOMAIN | 35 | 237 | IPR044808 | GO:0003700|GO:0009873 | |
Blo03g00146 | 277 | CDD | AP2 | 137 | 196 | IPR001471 | GO:0003700|GO:0006355 | |
Blo03g00146 | 277 | SMART | rav1_2 | 138 | 202 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00266 | Blo-Chr1:3411639 | Blo03g00146 | Blo-Chr3:3972006 | 1.14E-35 | dispersed | |
Blo03g00146 | Blo-Chr3:3972006 | Blo07g00494 | Blo-Chr7:11623085 | 1.18E-51 | dispersed | |
Blo15g00111 | Blo-Chr15:921240 | Blo03g00146 | Blo-Chr3:3972006 | 1.61E-28 | dispersed | |
Blo03g00146 | Blo-Chr3:3972006 | Blo03g00147 | Blo-Chr3:4000497 | 1.29E-27 | tandem | |
Blo02g01024 | Blo-Chr2:39681459 | Blo03g00146 | Blo-Chr3:3972006 | 2.29E-143 | wgd | |
Blo03g00146 | Blo-Chr3:3972006 | Blo06g01065 | Blo-Chr6:34019697 | 1.58E-29 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12089 | PF00847 | AP2 | 1.80E-14 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g00146 | K09286 | - | mnt:21406767 | 288.115 |