Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00148 ATGATTGCTGGAAACGAAAATGATCATTTGGGTTTGAGTTTGAGCCTGGCTTTTCCTCAGAATCGTCGCTACGGAGCTTCTCCTTCTCCTTCTCCTTCTCCATCTGGGTTTTGTTCTGATTTTCAGAAACCTTTCTGGAATGAAACATGCTTTCCTTCTTCTGACCGAGAGAATCCCGACACGTTCCGTGTGGAGAACCGATCATTTGTCCGAGGTATAGACGTGAACCGGCCGCCGTCGACGGCGGACTGCGACGAGGAACCAGGAGTGTCGAGCCCCAACAGCACGGTTTCGAGCGTTAGCGGAAAGCGAAGTGAGAGAGAAGCAAACGGAGAAGAGCTCGATCGCGGAGAAGAGCTCGACCTCGATCGAGCTTGTTCTCGAGGGAATAGTGATGAAGAAGACGTCGAAACCTCAAGAAAGAAGCTCAGGCTCTCCAAAGACCAATCGGCCATTTTAGAGGAGAGCTTCAAAGAGCACAACACTCTTAATCCAAAGCAGAAGTTGGCGTTGGCTAAGCAGTTGGGTCTTCGGGCGAGACAAGTGGAAGTCTGGTTTCAGAATAGAAGGGCAAGAACGAAGCTGAAGCAAACGGAGGTTGATTGTGAGTTTTTGAAAAGATGCTACGAGAATCTGACGGATGAGAATAGGCGGTTGCAGAAAGAAGTACAGGAGCTGAGAGCACTGAAACTTTCCCCACAGCTCTACATGCAAATGACCCCACCCACCACCCTCACCATGTGTCCCTCGTGCGAACGGGTGGGGGCCCCACATACCTCCTCCGCCCGGGCCCACCACCAGCTGGCCTCGGCCCACCCTCGTCCTATCCACGTCAGCCCGTGGGCGGTTTCCGGCCCGATAACACACCAGAGGATCCACCCGAAATAA 888 52.82 MIAGNENDHLGLSLSLAFPQNRRYGASPSPSPSPSGFCSDFQKPFWNETCFPSSDRENPDTFRVENRSFVRGIDVNRPPSTADCDEEPGVSSPNSTVSSVSGKRSEREANGEELDRGEELDLDRACSRGNSDEEDVETSRKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCYENLTDENRRLQKEVQELRALKLSPQLYMQMTPPTTLTMCPSCERVGAPHTSSARAHHQLASAHPRPIHVSPWAVSGPITHQRIHPK 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4015074 4016337 - BLOR11329 Blo03g00148 57612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00148 295 ProSitePatterns 'Homeobox' domain signature. 171 194 IPR017970 GO:0000981|GO:0006355
Blo03g00148 295 MobiDBLite consensus disorder prediction 21 40 - -
Blo03g00148 295 SMART halz 196 239 IPR003106 GO:0006355|GO:0043565
Blo03g00148 295 MobiDBLite consensus disorder prediction 49 145 - -
Blo03g00148 295 PRINTS Lambda-repressor HTH signature 167 176 IPR000047 GO:0003677
Blo03g00148 295 PRINTS Lambda-repressor HTH signature 176 192 IPR000047 GO:0003677
Blo03g00148 295 SUPERFAMILY Homeodomain-like 132 197 IPR009057 -
Blo03g00148 295 Pfam Homeodomain 140 194 IPR001356 GO:0003677
Blo03g00148 295 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 7 286 - -
Blo03g00148 295 Pfam HD-ZIP protein N terminus 6 108 IPR006712 GO:0005634
Blo03g00148 295 Coils Coil 195 232 - -
Blo03g00148 295 CDD homeodomain 140 197 IPR001356 GO:0003677
Blo03g00148 295 MobiDBLite consensus disorder prediction 105 145 - -
Blo03g00148 295 PANTHER - 7 286 - -
Blo03g00148 295 SMART HOX_1 138 200 IPR001356 GO:0003677
Blo03g00148 295 MobiDBLite consensus disorder prediction 87 104 - -
Blo03g00148 295 Pfam Homeobox associated leucine zipper 196 230 IPR003106 GO:0006355|GO:0043565
Blo03g00148 295 Gene3D - 144 194 - -
Blo03g00148 295 ProSiteProfiles 'Homeobox' domain profile. 136 196 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00382 Blo-Chr2:4416399 Blo03g00148 Blo-Chr3:4015074 1.93E-64 dispersed
Blo03g00148 Blo-Chr3:4015074 Blo05g00182 Blo-Chr5:1733002 9.12E-67 dispersed
Blo14g00693 Blo-Chr14:15928520 Blo03g00148 Blo-Chr3:4015074 6.73E-37 dispersed
Blo03g00148 Blo-Chr3:4015074 Blo06g00622 Blo-Chr6:29128151 6.27E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12091 PF04618 HD-ZIP_N 1.50E-27 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00148 K09338 - jre:109005254 390.963