Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00188 ATGTTGAAACCAAAGTTTTTTGAAACATTGTCATTTGGTGGATCACAACATGGTCAGGGTCAACAAGTTCTGCCATTTCCAACAAACAAGGGATCCTTGAGGGTTTTGCTCTTACATGGAGCCTTAGACATTTGGATCAATGAGGCCAAAAACCTTCCTAATATGGATATGTTTCATAAGACTTTAGGAGATGTGTTTTTAAAAATACCCGTGAAAATTAGCAGCAAAATTGAAGGGCGTGCATCTAGTGTAATAACCAGTGATCCCTATGTCACCGTTTCTGTTTCTGGTGCTGTAATTGGAAGAACTTTTGTTATTCCTAACAGTGAAAACCCTGTTTGGAGGCAGCATTTTAATGTTCCTGTCGCACATTATGGATCAGAAGTGCAGTTTGTAGTGAAAGACGATGATGTTGTGGGATCTCAGATCATTGGCGCTGTTGGTATTCCGGTGGAACAATTATACTCTGAGGTGAAAGTTGAAGGTATCTTTCCAATCCTTAATTCAGGAGGGAAGCCCTGCAAAGATGGAGCTGTCTTGAGTTTATCAATTCAGTATATACCGATTAACAAGATAACCCTTTATGATGGTAGATTAGATCCATCTTATGATAGCCATGGTGTCTCTGCCACTTATTTTCCTCCTAGGAAAGGAGGCAAAGTTACACTTTATCAAGATGCTCACGTCCATGATGATCTCCTTCCAAATATCAAGCTTTATGGTGGTGATAAGTACAATCATGGATCTTGCTGGCGTGACGTCTTCAATGCCATTAGTCAAGCTCGTCGTTTGATCTACATTACTGGTTGGTCTGTTTATCATGATGTTGAACTCGTTCGGGATGCTAATAATCCCGAGGAATATATTTTGGGAAATCTTCTCAAAGCCAAGTCACAAGAAGGTGTGAGAGTGTTGCTGCTTATATGGGATGATCCAACTTCTAAAAGTATTTTGGGATATAGAACGGATGGACTCATGGGAACAAACGATGAGGAAACTCGCCGTTTTTTTAAGCACTCTTCTGTCAAAGTGATTCTCTGTCCAAGGTCTGCCGGAAGTGGTCATAGCTGGGCTAAACAACAGGAAGTTGGAACAATTTATACCCATCATCAGAAGACTGTGATTGTGGATGCTGATGCAGGTAATTATAGAAGAAAGATCATAGCATTTGTTGGAGGTCTTGATCTATGCAAGGGCCGATACGATACCCCACAGCATCCTCTTTTCAGGACACTGAATACTGTCCACAGAGATGACTTCCACAACCCAAATTTCGCGGAACTAATTCCTGGTGGTCCACGAGAGCCATGGCATGATTTGCATTGTCAAATTGATGGTCCAGCTGCATACGATGTCCTCACCAATTTTGAGGAGCGTTGGAGGAAGGCTTCTGAAGCTCATGGACTGAAGAAACTAAAATCATCAACTGAGGATGCATTACTCAAGATTGAACGAATTTCTGAAATCATTGGAGCAGAAGATGCGTCTCGTCTAGGTATTGTTGATCCAGAAGGTTGGAATGTGCAGATTTTCCGTTCAATTGATTCTAACTCCGTGATAGGCTTTCCAGACGAACCAAAACACACAGCAGAGAAGAACTTAGTATGTGGAAAGAACGTGCTCATAGACATGAGCATTCATACAGCATATATCAGTGCAATTCGAGCAGCCCAACATTTTATTTACATCGAGAATCAGTATTTCCTCGGTTCTTCATACAATTGGAATTCTCACAAAGATTTAGGGGCGAACAATTTAATACCCATGGAAATTGCTCTTAAAATTGTGAACAAAATCAAAGCAAAAGAGAGGTTTTCTGCTTATATTGTTGTTCCTATGTGGCCAGAAGGCAATCCCACAAGCACTCCTATCCAAAGAATTCTCTATTGGCAGAGAAAAACCATGCAGATGATGTATGAAATGATTTACAACGCTTTAAAGGAGGTTGGACTTGAGAATACATACGAGCCACAAGATTATTTGAATTTCTTTTGCCTCGGAAATCGAGAAGCATCGGATGGAGAGCACGTTGTTAAAGCTGGGAAATCTGCTGGCACAAAAACTCAAGCACTAGCTCAGAAAGCTCGTCGCTTTATGATCTATGTCCACTCGAAAGGGATGATAGTGGACGACGAGTATGTAATTCTGGGATCTGCAAATATCAATCAGCGATCTATGGAAGGCACTCGAGACACAGAAATTGCCATGGGTGCATACCAGCCTCTTCATACCAGGTCAAGCGGATTCTCCCGCCCACTTGGTCAGATATACGGGTATAGAATGTCGTTATGGGCAGAGCACATGGGGACTCGGGAGGAATGTTTCGAGCAGCCCGACAGCGTCGAATGTACACGCCGGGTTAGATCTTTGAGCGAGAAAAATTGGAGCCAATATGTGGGGGAGGAGTTGGTGGAGATGAGAGGCCATCTTCTCAAGTATCCGCTCGAAGTCGATCGAACCGGCAAGGTTAAGCATCTTCCTGCCTTCGAAATGTTTCCGGACGTCGGAGGTAACATAATGGGAACATTCACCGTCATACAAGAAAATCTCACAATCTAA 2559 42.44 MLKPKFFETLSFGGSQHGQGQQVLPFPTNKGSLRVLLLHGALDIWINEAKNLPNMDMFHKTLGDVFLKIPVKISSKIEGRASSVITSDPYVTVSVSGAVIGRTFVIPNSENPVWRQHFNVPVAHYGSEVQFVVKDDDVVGSQIIGAVGIPVEQLYSEVKVEGIFPILNSGGKPCKDGAVLSLSIQYIPINKITLYDGRLDPSYDSHGVSATYFPPRKGGKVTLYQDAHVHDDLLPNIKLYGGDKYNHGSCWRDVFNAISQARRLIYITGWSVYHDVELVRDANNPEEYILGNLLKAKSQEGVRVLLLIWDDPTSKSILGYRTDGLMGTNDEETRRFFKHSSVKVILCPRSAGSGHSWAKQQEVGTIYTHHQKTVIVDADAGNYRRKIIAFVGGLDLCKGRYDTPQHPLFRTLNTVHRDDFHNPNFAELIPGGPREPWHDLHCQIDGPAAYDVLTNFEERWRKASEAHGLKKLKSSTEDALLKIERISEIIGAEDASRLGIVDPEGWNVQIFRSIDSNSVIGFPDEPKHTAEKNLVCGKNVLIDMSIHTAYISAIRAAQHFIYIENQYFLGSSYNWNSHKDLGANNLIPMEIALKIVNKIKAKERFSAYIVVPMWPEGNPTSTPIQRILYWQRKTMQMMYEMIYNALKEVGLENTYEPQDYLNFFCLGNREASDGEHVVKAGKSAGTKTQALAQKARRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPLHTRSSGFSRPLGQIYGYRMSLWAEHMGTREECFEQPDSVECTRRVRSLSEKNWSQYVGEELVEMRGHLLKYPLEVDRTGKVKHLPAFEMFPDVGGNIMGTFTVIQENLTI 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4527683 4532744 + BLOR11369 Blo03g00188 57652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00188 852 Pfam C2 domain 40 166 IPR000008 -
Blo03g00188 852 CDD C2_plant_PLD 35 187 - -
Blo03g00188 852 PANTHER PHOSPHOLIPASE D 7 852 IPR015679 -
Blo03g00188 852 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 7 852 - -
Blo03g00188 852 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Blo03g00188 852 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Blo03g00188 852 PIRSF PLD_plant 27 852 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Blo03g00188 852 SUPERFAMILY Phospholipase D/nuclease 532 783 - -
Blo03g00188 852 Gene3D Endonuclease Chain A 238 486 - -
Blo03g00188 852 SUPERFAMILY Phospholipase D/nuclease 207 464 - -
Blo03g00188 852 SMART C2_3c 41 163 IPR000008 -
Blo03g00188 852 Pfam Phospholipase D C terminal 772 842 IPR024632 -
Blo03g00188 852 Pfam PLD-like domain 553 734 IPR025202 -
Blo03g00188 852 Gene3D Endonuclease Chain A 498 745 - -
Blo03g00188 852 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Blo03g00188 852 Gene3D C2 domain 35 174 IPR035892 -
Blo03g00188 852 ProSiteProfiles C2 domain profile. 18 164 IPR000008 -
Blo03g00188 852 SMART pld_4 365 400 IPR001736 GO:0003824
Blo03g00188 852 SMART pld_4 698 725 IPR001736 GO:0003824
Blo03g00188 852 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 698 725 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00142 Blo-Chr1:1940325 Blo03g00188 Blo-Chr3:4527683 0 dispersed
Blo03g00188 Blo-Chr3:4527683 Blo05g00697 Blo-Chr5:23737921 0 dispersed
Blo03g00188 Blo-Chr3:4527683 Blo06g00662 Blo-Chr6:29610978 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00188 K01115 - twl:119980407 1315.83