Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00192 ATGATTTGCTGGCACGTGTCCACGCTTGACCCAACCAGTTATAAGAAAAACCCGACCGCCACTCTCCCTCCCTCCATCGTCACTCCCCACGAAATGGATTTTCGCAGCGATGTTACCCGGCCTGACTCGCTGGGGAAGCTCGTTGAAAAGCCGGAGAGTTCTGGCTTGGGTGGGCGAGTTTCTCATTCTGATGAAGAATTAATATTGGCTAGGAACCGACCGAAGAAGCGAGCCGGTCGGAGAGTGTTTACGGAGACGAGACATCCAGTTTATCGAGGAGTGCGGAGAAGAAACTCTAACAAGTGGGTTAGCGAGATTAGAGAACCAAAGAAGAAGACGCGCATATGGCTCGGCACGTATCCGACCCCCGAAATGGCGGCGCGTGCTCACGACGTTGCCGTCCTAGCTCTGAGAGGGAAGACGGCGTGTCTCAATTTCGAAGACTCGGCGTGGAGGTTTGCGGTGCCAACGTCGAAGGACCCGAAGGAAATAAGAATAGCGGCAGCTCTGGCGGCGGAGACAGTTGGTAGGGAAGGAGGTGGAGAGGAGGAGGGGAGGACGACGAAGGAGAAAACAGATGAAGACGTTTTTTATATGGACGAAGAAGATGAGGGTACTTTCGGAATTCCCACTGACGTGGCAGATTTTCCATTGCTGTCTCCCTCTCCCCCACAATTTAGCCTCGGTGATGACGTAAAGTGGGATGACATGGACATGGATGCTGATGTGTCATTATGGAGTTTTTCTATTTGA 753 52.46 MICWHVSTLDPTSYKKNPTATLPPSIVTPHEMDFRSDVTRPDSLGKLVEKPESSGLGGRVSHSDEELILARNRPKKRAGRRVFTETRHPVYRGVRRRNSNKWVSEIREPKKKTRIWLGTYPTPEMAARAHDVAVLALRGKTACLNFEDSAWRFAVPTSKDPKEIRIAAALAAETVGREGGGEEEGRTTKEKTDEDVFYMDEEDEGTFGIPTDVADFPLLSPSPPQFSLGDDVKWDDMDMDADVSLWSFSI 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4603081 4603833 - BLOR11373 Blo03g00192 57656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00192 250 SMART rav1_2 90 153 IPR001471 GO:0003700|GO:0006355
Blo03g00192 250 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F 58 250 - -
Blo03g00192 250 SUPERFAMILY DNA-binding domain 90 149 IPR016177 GO:0003677
Blo03g00192 250 ProSiteProfiles AP2/ERF domain profile. 90 147 IPR001471 GO:0003700|GO:0006355
Blo03g00192 250 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 58 250 IPR045277 GO:0003700
Blo03g00192 250 Gene3D AP2/ERF domain 90 148 IPR036955 GO:0003700|GO:0006355
Blo03g00192 250 Pfam AP2 domain 89 139 IPR001471 GO:0003700|GO:0006355
Blo03g00192 250 CDD AP2 91 149 IPR001471 GO:0003700|GO:0006355
Blo03g00192 250 PRINTS Ethylene responsive element binding protein signature 113 129 IPR001471 GO:0003700|GO:0006355
Blo03g00192 250 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01095 Blo03g00192 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00192 Blo-Chr3:4603081 Blo06g01110 Blo-Chr6:34522694 2.59E-63 dispersed
Blo03g00216 Blo-Chr3:4920483 Blo03g00192 Blo-Chr3:4603081 1.13E-08 transposed
Blo15g00153 Blo-Chr15:1552776 Blo03g00192 Blo-Chr3:4603081 2.98E-63 wgd
Blo02g01095 Blo-Chr2:41857139 Blo03g00192 Blo-Chr3:4603081 2.08E-83 wgd
Blo03g00192 Blo-Chr3:4603081 Blo06g01109 Blo-Chr6:34509872 1.37E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12093 PF00847 AP2 8.00E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00192 - - zju:107404829 219.164