Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g00206 | ATGGACTCCCATTCTCTTCCACCTCCTTTTCACAACAGAGATTTCCATCTTCTCCAACAGCAACACGAATTTCTTCAACTTCAACAACAGCAAAATTCAGATCATGACCAGCAAAGGAGTAGCAGCGGACTGAACCAGACCCAAAAACGAGATCGTGACGAATATAGCGATACTGGAGGAGATGGCAGCAAAGACCTCTCCGGAGAGGGATCAGAAATGTCTAGACGACCCCGAGGAAGACCGGCCGGATCCAAAAACAAACCCAAACCTCCTATAATCATCACTAGAGACAGCGCTAACGCTCTACGCACCCATGTTATAGAAGTCACTGACGGATGTGACATCATCGAGAGTGTTTCCACCTTTGCTCGCAGGAGACAGAGGGGGGTCTGCATTATGAGCGGCGTCGGAACGGTGACGAACGTCACGATCCGGCAGCCGGCTTCTCCTGGTGCTGTCGTTACTTTACACGGCCGGTTTGAGATCTTATCATTATCCGGCTCGTTTCTACCACCTCCAGCTCCCCCGGCAGCTACTGGGCTGTCCATATATTTGGCCGGAGGGCAAGGGCAAGTGGTCGGAGGGAGTGTCGTCGGGAAACTGGTTGCTGCCGGTCCCGTGGTAATTATGGCTGCTTCGTTTGGCAACGCTGCCTACGAGAGGCTTCCACTTGAAGACGATGAAGAACCCCCGCCGTTGCCTATCCAAGGAAGCTCAATTGGATCGCCTGGTGCAGTTAATCAGACACTCCAAGCTCCGCCATTAATGGCGGATGGGAATCAGCCGCCTTTATTTCATGGGATGCCTCCGAATCTTCTAAACTCCATTCAATTACCATCTGAAGCTTACTGGTCTACTGGTCGTCCTCCGTACTAA | 876 | 51.83 | MDSHSLPPPFHNRDFHLLQQQHEFLQLQQQQNSDHDQQRSSSGLNQTQKRDRDEYSDTGGDGSKDLSGEGSEMSRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDIIESVSTFARRRQRGVCIMSGVGTVTNVTIRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAATGLSIYLAGGQGQVVGGSVVGKLVAAGPVVIMAASFGNAAYERLPLEDDEEPPPLPIQGSSIGSPGAVNQTLQAPPLMADGNQPPLFHGMPPNLLNSIQLPSEAYWSTGRPPY | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4807881 | 4808756 | - | BLOR11387 | Blo03g00206 | 57670 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g00206 | 291 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 103 | 215 | IPR005175 | - | |
Blo03g00206 | 291 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 99 | 228 | - | - | |
Blo03g00206 | 291 | CDD | DUF296 | 103 | 186 | IPR005175 | - | |
Blo03g00206 | 291 | ProSiteProfiles | PPC domain profile profile. | 99 | 237 | IPR005175 | - | |
Blo03g00206 | 291 | Gene3D | - | 102 | 229 | - | - | |
Blo03g00206 | 291 | MobiDBLite | consensus disorder prediction | 19 | 45 | - | - | |
Blo03g00206 | 291 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 3 | 291 | IPR014476 | GO:0003680 | |
Blo03g00206 | 291 | PIRSF | ESCAROLA | 13 | 291 | IPR014476 | GO:0003680 | |
Blo03g00206 | 291 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED | 3 | 291 | - | - | |
Blo03g00206 | 291 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
Blo03g00206 | 291 | MobiDBLite | consensus disorder prediction | 46 | 60 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo02g00288 | Blo-Chr2:2794691 | Blo03g00206 | Blo-Chr3:4807881 | 2.89E-114 | dispersed | |
Blo03g00206 | Blo-Chr3:4807881 | Blo19g00297 | Blo-Chr19:18628750 | 5.96E-117 | dispersed | |
Blo03g00206 | Blo-Chr3:4807881 | Blo03g00383 | Blo-Chr3:9086916 | 1.89E-135 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g00206 | - | - | qsu:112016192 | 359.762 |