Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00206 ATGGACTCCCATTCTCTTCCACCTCCTTTTCACAACAGAGATTTCCATCTTCTCCAACAGCAACACGAATTTCTTCAACTTCAACAACAGCAAAATTCAGATCATGACCAGCAAAGGAGTAGCAGCGGACTGAACCAGACCCAAAAACGAGATCGTGACGAATATAGCGATACTGGAGGAGATGGCAGCAAAGACCTCTCCGGAGAGGGATCAGAAATGTCTAGACGACCCCGAGGAAGACCGGCCGGATCCAAAAACAAACCCAAACCTCCTATAATCATCACTAGAGACAGCGCTAACGCTCTACGCACCCATGTTATAGAAGTCACTGACGGATGTGACATCATCGAGAGTGTTTCCACCTTTGCTCGCAGGAGACAGAGGGGGGTCTGCATTATGAGCGGCGTCGGAACGGTGACGAACGTCACGATCCGGCAGCCGGCTTCTCCTGGTGCTGTCGTTACTTTACACGGCCGGTTTGAGATCTTATCATTATCCGGCTCGTTTCTACCACCTCCAGCTCCCCCGGCAGCTACTGGGCTGTCCATATATTTGGCCGGAGGGCAAGGGCAAGTGGTCGGAGGGAGTGTCGTCGGGAAACTGGTTGCTGCCGGTCCCGTGGTAATTATGGCTGCTTCGTTTGGCAACGCTGCCTACGAGAGGCTTCCACTTGAAGACGATGAAGAACCCCCGCCGTTGCCTATCCAAGGAAGCTCAATTGGATCGCCTGGTGCAGTTAATCAGACACTCCAAGCTCCGCCATTAATGGCGGATGGGAATCAGCCGCCTTTATTTCATGGGATGCCTCCGAATCTTCTAAACTCCATTCAATTACCATCTGAAGCTTACTGGTCTACTGGTCGTCCTCCGTACTAA 876 51.83 MDSHSLPPPFHNRDFHLLQQQHEFLQLQQQQNSDHDQQRSSSGLNQTQKRDRDEYSDTGGDGSKDLSGEGSEMSRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDIIESVSTFARRRQRGVCIMSGVGTVTNVTIRQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAATGLSIYLAGGQGQVVGGSVVGKLVAAGPVVIMAASFGNAAYERLPLEDDEEPPPLPIQGSSIGSPGAVNQTLQAPPLMADGNQPPLFHGMPPNLLNSIQLPSEAYWSTGRPPY 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4807881 4808756 - BLOR11387 Blo03g00206 57670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00206 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 215 IPR005175 -
Blo03g00206 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 228 - -
Blo03g00206 291 CDD DUF296 103 186 IPR005175 -
Blo03g00206 291 ProSiteProfiles PPC domain profile profile. 99 237 IPR005175 -
Blo03g00206 291 Gene3D - 102 229 - -
Blo03g00206 291 MobiDBLite consensus disorder prediction 19 45 - -
Blo03g00206 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 291 IPR014476 GO:0003680
Blo03g00206 291 PIRSF ESCAROLA 13 291 IPR014476 GO:0003680
Blo03g00206 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 3 291 - -
Blo03g00206 291 MobiDBLite consensus disorder prediction 1 93 - -
Blo03g00206 291 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00288 Blo-Chr2:2794691 Blo03g00206 Blo-Chr3:4807881 2.89E-114 dispersed
Blo03g00206 Blo-Chr3:4807881 Blo19g00297 Blo-Chr19:18628750 5.96E-117 dispersed
Blo03g00206 Blo-Chr3:4807881 Blo03g00383 Blo-Chr3:9086916 1.89E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00206 - - qsu:112016192 359.762