Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00211 ATGGATGGGAGAGAAGCTATGGCAATTTCTGGTGGGTCAGCTCAGTATTACATTCACAGAGGACGCTTTAGCGGATCTGGTCCAGGAAATCAGACCGCAGGTCTGCACTCTCCGCCGGAGTTCAGGCAGTTTTCGAACTCTGGCATTCCGTCCCAGCCGCATCCTCACTCGGTAGGAACGGCATTTTCAGTGGAGTCTTCACTAGGAAATTACTCTCTAGGCATTAACGCCGGAGTGTCTGCCGGAGCTCCAGCTAGTGAACCAGTGAAGAAGAAAAGAGGAAGGCCTCGGAAATATGCACCAGATGCCCCGGTTTCATTGGGACTATCTCCAATGTCAGCTAATTCCAATAAAAACTCTGGTTCGAACTCCGAGAACCCTAAACGAGCTAGAGGGAGACCGCCTGGTTCTGGAAGGAAACAACAATTAGCGTCACTTGGTGAATGGATGAACAGTTCAGCTGGACAAGCTTTTGCGCCACATGTCATGCACATTGGAGCAGGAGAGGACATTGTTGCAAAAGTTTTGTCATTTTCACAACAGAAGGGAAGAGCTGTTTGCATAATGTCTGGAAATGGTACAGTTTCTTCAGTGACACTTCGCCTACCTGCATCTGCCGATATGGGCCCAAAATTTGAGGGGAGGTTCCAAATATTGTGTTTGTCAGGTTCATACTTGGTTTCGGAAGATGGAGGCCCCCGAAATCGAAATGGAGGAGTAAGCGTATCTCTTGCTACTCCCGACGGTCAGGTGATCGGTGGTGCAGCTGATGTGCTCATCTCAGCTGCCCCTGTTCAGGTTATTGTATGCAGTTTTGTCTATGGTGGTTCAAAGACGAAGAACAAGCAAGTAGCTGCACCCAAAAGTGATGACAGTTCTGAGCCTCAACCGAGCGATGAATTAGCTCCGCAATCTGCCTTTCCTGATCAAACCTACACTCCATCCACAGCTGGGTTTTGGCCTGGATCCCGGCCCATGCTCTCTCATTCCGGCATTGATTTAACTCGTGGGTGA 1014 49.41 MDGREAMAISGGSAQYYIHRGRFSGSGPGNQTAGLHSPPEFRQFSNSGIPSQPHPHSVGTAFSVESSLGNYSLGINAGVSAGAPASEPVKKKRGRPRKYAPDAPVSLGLSPMSANSNKNSGSNSENPKRARGRPPGSGRKQQLASLGEWMNSSAGQAFAPHVMHIGAGEDIVAKVLSFSQQKGRAVCIMSGNGTVSSVTLRLPASADMGPKFEGRFQILCLSGSYLVSEDGGPRNRNGGVSVSLATPDGQVIGGAADVLISAAPVQVIVCSFVYGGSKTKNKQVAAPKSDDSSEPQPSDELAPQSAFPDQTYTPSTAGFWPGSRPMLSHSGIDLTRG 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4867311 4869787 - BLOR11392 Blo03g00211 57675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00211 337 SUPERFAMILY AF0104/ALDC/Ptd012-like 156 274 - -
Blo03g00211 337 MobiDBLite consensus disorder prediction 25 61 - -
Blo03g00211 337 PRINTS AT-hook-like domain signature 126 137 IPR017956 GO:0003677
Blo03g00211 337 PRINTS AT-hook-like domain signature 90 100 IPR017956 GO:0003677
Blo03g00211 337 ProSiteProfiles PPC domain profile profile. 155 298 IPR005175 -
Blo03g00211 337 Gene3D - 160 285 - -
Blo03g00211 337 SMART AT_hook_2 128 140 IPR017956 GO:0003677
Blo03g00211 337 SMART AT_hook_2 90 102 IPR017956 GO:0003677
Blo03g00211 337 CDD DUF296 160 272 IPR005175 -
Blo03g00211 337 MobiDBLite consensus disorder prediction 109 127 - -
Blo03g00211 337 MobiDBLite consensus disorder prediction 281 318 - -
Blo03g00211 337 Pfam Plants and Prokaryotes Conserved (PCC) domain 160 273 IPR005175 -
Blo03g00211 337 MobiDBLite consensus disorder prediction 79 143 - -
Blo03g00211 337 MobiDBLite consensus disorder prediction 19 61 - -
Blo03g00211 337 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 333 IPR039605 GO:0003680
Blo03g00211 337 MobiDBLite consensus disorder prediction 281 337 - -
Blo03g00211 337 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 333 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01107 Blo03g00211 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00353 Blo-Chr2:3792539 Blo03g00211 Blo-Chr3:4867311 4.04E-87 dispersed
Blo03g00211 Blo-Chr3:4867311 Blo16g00434 Blo-Chr16:17141839 5.70E-90 dispersed
Blo02g01107 Blo-Chr2:42065849 Blo03g00211 Blo-Chr3:4867311 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00211 - - jre:109014458 416.387