Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00226 ATGGAGGGGAAGGAGGAGGATGTTAAGCTCGGAGCGAACAAGTTTTCCGAGAGGCAACCGATTGGTACGTCTGCTCAGACAGACAAGGACTACAAGGAACCACCGCCGGCGCCGTTGTTTGAGCCAGGAGAGCTGACCTCTTGGTCTTTTTACAGAGCCGGAATTGCAGAGTTCATCGCAACTTTCTTGTTCCTCTACATCTCAGTGTTGACTGTCATGGGTGTAGTCAAAGCTCCTAATAAATGTGCGTCTGTGGGTATTCAAGGGATCGCTTGGGCTTTTGGTGGTATGATCTTCGCCCTTGTCTACTGCACTGCTGGTATTTCCGGAGGACACATCAACCCGGCTGTGACCTTCGGTCTCTTTCTAGCCAGAAAGCTCTCTCTCACTAGAGCCATCTTCTACATGGTTATGCAATGCCTGGGTGCCATTTGCGGAGCTGGTGTGGTGAAAGGATTTGAAGGCGCTGCGACGTACGAACAGAAATTGGGTGGCGCTAACGTCGTCCAATCTGGCTACACCAAAGGAGATGGTCTCGGAGCTGAAATCGTCGGCACTTTTGTGCTCGTCTACACTGTCTTCTCCGCCACTGATGCTAAGAGAAATGCCAGAGACTCCCACGTTCCGATTTTGGCTCCACTTCCGATTGGATTCGCAGTGTTTTTGGTTCATTTAGCGACCATTCCCATCACCGGCACCGGTATCAACCCAGCAAGGAGTCTTGGAGCGGCGATCATCTACAACAGACAACATGCTTGGGACGATCAATGGATCTTCTGGGTAGGACCCTTCATCGGAGCTGCTCTTGCTGCATTGTACCATGTCATTGTGATCAGAGCCATTCCTTTCAAGACCAGAGCTTGA 864 51.04 MEGKEEDVKLGANKFSERQPIGTSAQTDKDYKEPPPAPLFEPGELTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKAPNKCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQCLGAICGAGVVKGFEGAATYEQKLGGANVVQSGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRQHAWDDQWIFWVGPFIGAALAALYHVIVIRAIPFKTRA 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5084808 5086572 + BLOR11407 Blo03g00226 57690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00226 287 SUPERFAMILY Aquaporin-like 44 279 IPR023271 -
Blo03g00226 287 MobiDBLite consensus disorder prediction 1 35 - -
Blo03g00226 287 Pfam Major intrinsic protein 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Blo03g00226 287 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 286 IPR034294 -
Blo03g00226 287 TIGRFAM MIP: MIP family channel proteins 56 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Blo03g00226 287 CDD MIP 52 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo03g00226 287 PANTHER AQUAPORIN PIP1-3 1 286 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01123 Blo03g00226 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00226 Blo-Chr3:5084808 Blo14g00177 Blo-Chr14:1386783 5.65E-136 dispersed
Blo15g00130 Blo-Chr15:1155224 Blo03g00226 Blo-Chr3:5084808 1.36E-26 dispersed
Blo04g00245 Blo-Chr4:1890557 Blo03g00226 Blo-Chr3:5084808 4.04E-178 transposed
Blo02g01123 Blo-Chr2:42493006 Blo03g00226 Blo-Chr3:5084808 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00226 K09872 - dcr:108208983 542.732