Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00229 ATGCCGAATTCGTGCCCTAGAAATCTCCGTTTCCCCTTCTCTTGGCCGCAGGCCCGTAAAATGCTCTTCCTTGCTAAACTCTACCTTCTCAGCTTTCTTCTTTTTGCTTTTCCTCATCCAATCGGCGATTTACCTCTCAGATTCCTGTCTGAGTTTCGAAATGGATTGGCGGGGCCGAAGCTCATGGGATCGGAATCAGAGAGTTTTGTAGAGTCTGAGACTGCGGTAAAGGAAGTGGATTTGTGTCAGTCCAGCCAAGTTTCCCCCCCTCCTGCCTCTTCAATTGAGCTTGGTGGCTCGTATTTTAGTCAAGAAGATGCGATGACCTCAGTCAAACAATCTGAGATTATATTGGATGAAATTCTGTATGGTAAACTTTGTAAGGATTCTAGTGAGCTGTCCATCTCTCAGGATGCAAATGCATCCGAACGCCATGAAAGAAGGGGAAAAGATGTTCTCTTGAGTAGTTCCCATACTGAAGTACAGCTGCAACAGAAAGCCAGAAAAGTTTCAAGGAGTAGTAGTTTGTATCCTAAGAAGCAGCATATGATTCGATTAAAAGATCCGATGATTTTGGCGAGAACGGACAATGTTAAGGACATTTCGAAGAAGCTTGGATCACATCCAAGAGCTTCTATCACTCCAGAGAAAGTGCAATTGGTGAAGCAAAAGAATAACTTTAATAGCAAGCGCGCTGATAGGAAAATTTTTAAGGTTTCTGCGAAGTCCAAATTTGATTCTTTTTCTATGAAAGCAAGTTCTGGAAGCTTCTGTTCAGCTACATCATCTGCCAGTAACTTTTTTGGAGGATATGGTCTGAAGTCAGGTGTTCATGATATCACAAAGCTTGAAGAGGATTTACCTTTGAAGAATCTTCTTGGTGGCACTTGTGAATTTCCTATTTTAAGCAAAGACATGGTAAAAAAAGAAGCTGATGCAAATGACAGTTTTCTGCAATCAGTCAGAAAAGCTTGCTCTATAATTCAGCTCCCTAGGCTTGTCCAGTCCTTAAGTATCAAGACAGATAGTGTTTCTACCAATAAAATGTCCCCTAGTCTTTTATGTTCTGTGGCTGGTGGTGTGAATGGTGATAAAGGAGACGACTACATGACTGAGTTATCTTCATGTAACAAGGATTCTTATAGCAAGTCTGATACTCCTGCTAACCCGCTCGACTATTTACTGTACAAACCAAATGATATTTATGAACTATTGGCTCTTCCTCCTCCCAAAGATTTGGATTCTTTACTCCAGGATGCAACCAAGCCTTCCATATCTTTAAAGAATGCTCCTGATATGCGTTCAGGTAAGCAGCTAGCTCGCCGTGCTAGCTTACAACCTTTTCAGTGGTCACATACTTTTAGTGGGCATTGTAAACCCATTTCAGATTCATCTAAGTTATCCGCAATTCCTCTAAAACTTATACGGGCTCCTAGTTCAGTGGACAGAACTTCAATTGGTGTTTCTGATAATAATCCTCAATGCAGCAGGAAAGTATTGTCTTCAACAACAAGTTTGAAAGCTTCCCTTCTTTCAATTGGAGGACATTGCCCCATGTTAGAAGGTGCCGCTCAAACTCTGTTTGACATGGCAACACATAGCTCGAGGTTAAATACAGATGAGGTGGTGAGGTGGCCTAAAAAAACCTCACAAAAGGCCATGAAAGCGAGGAAGTGGAAATCAAATGATATACCCGAAGAAATATTGACAACGTCCAATTCAGGATCAGGCTCGGACTATCCAATGAGAAATACGGGTTTGCCCTTGTCCTCCAAAAAGCCGAGGCTCTATACAAACGAGACCAAGAAAGATCTTGGTCATTCCAATTACAGAAAAGGCCCTTTACATTGGTCAAATTCAAGATCAAGCCGATCATCGCCAAGCAAATTAACTAAAGACTCGATGTTCGAAACAAGATATTCAACTGTTGGTATTATGAAACAATCGTGTATGATGCCTCCTCCAGCAACACCTATGGATAAAGACTCGTGA 1992 41.67 MPNSCPRNLRFPFSWPQARKMLFLAKLYLLSFLLFAFPHPIGDLPLRFLSEFRNGLAGPKLMGSESESFVESETAVKEVDLCQSSQVSPPPASSIELGGSYFSQEDAMTSVKQSEIILDEILYGKLCKDSSELSISQDANASERHERRGKDVLLSSSHTEVQLQQKARKVSRSSSLYPKKQHMIRLKDPMILARTDNVKDISKKLGSHPRASITPEKVQLVKQKNNFNSKRADRKIFKVSAKSKFDSFSMKASSGSFCSATSSASNFFGGYGLKSGVHDITKLEEDLPLKNLLGGTCEFPILSKDMVKKEADANDSFLQSVRKACSIIQLPRLVQSLSIKTDSVSTNKMSPSLLCSVAGGVNGDKGDDYMTELSSCNKDSYSKSDTPANPLDYLLYKPNDIYELLALPPPKDLDSLLQDATKPSISLKNAPDMRSGKQLARRASLQPFQWSHTFSGHCKPISDSSKLSAIPLKLIRAPSSVDRTSIGVSDNNPQCSRKVLSSTTSLKASLLSIGGHCPMLEGAAQTLFDMATHSSRLNTDEVVRWPKKTSQKAMKARKWKSNDIPEEILTTSNSGSGSDYPMRNTGLPLSSKKPRLYTNETKKDLGHSNYRKGPLHWSNSRSSRSSPSKLTKDSMFETRYSTVGIMKQSCMMPPPATPMDKDS 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5099696 5103726 + BLOR11410 Blo03g00229 57693

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00229 663 MobiDBLite consensus disorder prediction 564 635 - -
Blo03g00229 663 MobiDBLite consensus disorder prediction 565 595 - -
Blo03g00229 663 MobiDBLite consensus disorder prediction 596 610 - -
Blo03g00229 663 MobiDBLite consensus disorder prediction 613 635 - -
Blo03g00229 663 PANTHER F22C12.19 512 662 - -
Blo03g00229 663 PANTHER F22C12.19 61 469 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00229 - - - qsu:112022751 417.542
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo03g00229 Blo19g00133 CCT
Blo03g00229 Blo03g00796 CCT
Blo02g01124 Blo03g00229 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00229 Blo-Chr3:5099696 Blo02g01124 Blo-Chr2:42519464 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g51 Blo02g01124 Blo03g00229 Bda06g00123 Bda08g00501 Bpe05g00663 Bpe07g00092 . . . Cmo16g00629 . . . . . Cpe14g00490 . . . . . . . . Cla07g00744 Cam07g0796 Cec07g0862 Cco07g0831 Clacu07g0777 Cmu07g0784 Cre07g1136 Cone8ag0273 Cone12ag0280 . . . . . Cme07g01611 . . . . . . Bma05g00837 Bma12g00062 . . . . Cma16g00579 . . . . . . . . . . . . . . . . . . . Csa04g00614 Chy07g01197 .
Vvi2g264 . Blo03g00229 . . . . Bma07g01036 Bma14g00095 . . Cma02g00950 Cma15g01328 Car02g00699 Car15g01194 . Cpe14g00512 Cpe05g00764 . . . . . . . Cla07g00787 Cam07g0850 Cec07g0903 Cco07g0885 Clacu07g0825 Cmu07g0828 Cre07g1186 . . . . . Csa05g00152 Chy09g01344 Cme07g01642 Blo03g00796 Blo19g00133 Bda07g00157 Bda09g00631 Bpe08g00909 Bpe11g00376 . . . Cmo02g00958 . . Cma16g00603 . . . . Bhi12g00073 . . Lac11g1892 Hepe06g1425 . Lcy12g1503 Cla01g00135 Cam01g0137 Cec01g0137 Cco01g0139 Clacu01g0133 Cmu01g0135 Cre09g2370 Lsi09g00125 Csa04g00585 Chy07g01226 Cme09g01892
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003101 2 1 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 11 3 1 52
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00229 Blo_Chr03 FPKM 0.039815 0.0 0.383162 0.383226 0.905633 0.470143 0.893435 1.287393 0.929444 1.616971