Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00234 ATGATTATCTCATCGGAAACGGCGTGTCCGTCGCCGATGAAGACAACCTCAAACGGTGTTTTCCAAGGAGATAATCCGCTCGATTTTGCGCTTCCTCTGGTGATTTTGCAGATTTGTTTAGTTCTTTTCGTCACTCGAAGTCTCGCCGTTGTTTTGAAGCCATTGAGACAGCCTCGGGTGATCGCCGAGGTCTTGGGAGGAATACTGCTTGGGCCATCGGCGCTGGGAAGAAACAAGACCTATCTTCAAGCAATGTTTCCATCTAAGAGTCTGCCTGTGTTAGAAACGATTGCAAACATTGGTTTATTGTTCTTTCTCTTCCTCGCTGGGCTCGAGTTAGATCCCCGATCGCTCCGTCAAACGGGAAAAAAGGCGCTTTGCATTGCCATCGCCGGAATCAGTCTCCCTTTTGTGTTAGGAATTGGTTCATCGCTTGTCCTCCGAGAAACCATAGCCAAAGCCGAAAATGGCAGCACATTTCTCGTATTCATGGGCGTGGCACTTTCGATTACAGCCTTTCCTGTATTGGCTCGGATTCTCGCCGAACTAAAGCTTTTAACGACGAATACCGGTAGGATGGCTATGTCGGCGGCGGCGGTCAACGACGTGGCGGCTTGGATTCTTCTGGCTGTTGCCATTGTTCTCTCTGGTTCTGGCCATTCTCCACTGGTTGCAGTCTGGGTTCTTTTGTCCGGATGCGGGTTTGTCATCGTTTCGATTCTTATTTTCTCCCCATTGTTCAAATGGATGAATAAGCAATGCCCTAATGGCGAGCCTGTAAGAGAGATATTCATATGCATCACTCTTGCTTGTGTTCTCGCCGCTGGATTCGTCACTGATTTTATCGGAATTCACGCTATGTTCGGAGCTTTCGTGGTCGGAATTCTCGTCCCGAAAGATGGATCATTCGCCGGAGCTTTGACGGAAAAAGTGGAAGATCTTGTCTCCGGTCTTTTCCTTCCTCTTTACTTTGTATCTAGCGGATTGAAGACTGATATAACGACAATTCAAGGACTTCAATCTTGGGGGCTTCTGGTTTTAGTCATATTTGCTGCTTGTTTCGGCAAAATTGTCGGCACCGTCGCAGTATCCTTGTCGTGCAAGATTCCTGCTCGAGAGGCGTTGACGCTCGGGTTTTTGATGAACAGCAAAGGGTTGGTGGAACTCATCGTCCTCAACGTCGGGAAAGATCGAAAGGTTTTGAATGATCAGACCTTTGCGATTATGGTTTTAATGGCGGTTTTTACAACTTTCATTACAACTCCTCTCGTCATTTCCGTCTACAAGCCGTCTACACAGGGGGAAACAGATGCTTACAAGCACAGAAAAATCGAGCGAGAAAATCCAGACACAGAGCTCAGGGTTTTGGCCTGCTTTCACAGCGCCAGAAACATCCCGTCGCTGATAAATCTGCTCGAGGCGTCGAGAGGGTCCGAGAAGCGCGACGGACTCTGCGTATATGCAATGCACCTGATGGAGCTCTCCGAAAGGTCTTCCGCCATTATAATGGTGCATAAAGCCAGAAAAGATGGCTTACCCTTCTGGAACAAAGGCCGGAGATCTGATTCCGAGCAGGTCGTCGTTGCGTTCGAGGCGTACCAGCAACTGAGCCAAGTTTCAATCCGGCCAATGACGGCAATTTCTTCCATTTCGAGCATGCACGAAGACATCTGCGCCACCGCCGGAAGCAAAAGAGCTTCGATCATAATCCTTCCATATCATAAACACCAGAGAATGGACGGTTCGCTGGAGATCACTCGCAGTAGCTTCCGGTTGGTCAACCAGAAAGTCCTCGATCACGCGCCGTGCTCCGTCGGAATTCTCGTCGATCGCGGACTTGGTGGATCCTTCCATATCCCTGCCAGTCACGTCTCTTATCTTATCACTGTTCTCTTCATCGGCGGTCCTGACGATCGGGAGGCGCTCGCTTATGGAACCCGTATGGCCGAGCATCCCGGCATTAGTTTGACTGTCGTCCGCTTCTCCGTCCATCCCTCCTCCACGGCGGAAACTGTCAGAGTCAACATAAATCAAAACTCTTCCTCTTTAGCAGGATCAGTGGACGGAGAAGAAGAATATCTTGAGCAGTACAAGCAAAAAGTAGCCGACGATAACTCGATTACGTACGACGAAAAAGCAGTAAAGAATTATGCCGAACTTATTGACGTGGTCAGAGGATTAAAGCCATGCAACCTGTTTCTCACCGGTAGATTTCCCAGCGGGGAAGTAGCTTTAGCGTTGAACAGCCGGAGTGAGTGCCCGGAGCTTGGCCCCGTCGGGAGCTTGTTGACTTGTACAGATTTTCCGACGACAGCTTCAGTTCTAGTGGTGCAGCAGAAATCATACTCCTAA 2352 49.32 MIISSETACPSPMKTTSNGVFQGDNPLDFALPLVILQICLVLFVTRSLAVVLKPLRQPRVIAEVLGGILLGPSALGRNKTYLQAMFPSKSLPVLETIANIGLLFFLFLAGLELDPRSLRQTGKKALCIAIAGISLPFVLGIGSSLVLRETIAKAENGSTFLVFMGVALSITAFPVLARILAELKLLTTNTGRMAMSAAAVNDVAAWILLAVAIVLSGSGHSPLVAVWVLLSGCGFVIVSILIFSPLFKWMNKQCPNGEPVREIFICITLACVLAAGFVTDFIGIHAMFGAFVVGILVPKDGSFAGALTEKVEDLVSGLFLPLYFVSSGLKTDITTIQGLQSWGLLVLVIFAACFGKIVGTVAVSLSCKIPAREALTLGFLMNSKGLVELIVLNVGKDRKVLNDQTFAIMVLMAVFTTFITTPLVISVYKPSTQGETDAYKHRKIERENPDTELRVLACFHSARNIPSLINLLEASRGSEKRDGLCVYAMHLMELSERSSAIIMVHKARKDGLPFWNKGRRSDSEQVVVAFEAYQQLSQVSIRPMTAISSISSMHEDICATAGSKRASIIILPYHKHQRMDGSLEITRSSFRLVNQKVLDHAPCSVGILVDRGLGGSFHIPASHVSYLITVLFIGGPDDREALAYGTRMAEHPGISLTVVRFSVHPSSTAETVRVNINQNSSSLAGSVDGEEEYLEQYKQKVADDNSITYDEKAVKNYAELIDVVRGLKPCNLFLTGRFPSGEVALALNSRSECPELGPVGSLLTCTDFPTTASVLVVQQKSYS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5154183 5156686 - BLOR11415 Blo03g00234 57698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00234 783 Pfam Sodium/hydrogen exchanger family 40 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo03g00234 783 Gene3D - 472 755 - -
Blo03g00234 783 PANTHER CATION/H + ANTIPORTER 6 780 - -
Blo03g00234 783 Gene3D - 33 435 IPR038770 -
Blo03g00234 783 PANTHER CATION/H(+) ANTIPORTER 18 6 780 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01131 Blo03g00234 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00234 Blo-Chr3:5154183 Blo05g00511 Blo-Chr5:8749897 0 dispersed
Blo03g00234 Blo-Chr3:5154183 Blo03g00235 Blo-Chr3:5160484 0 tandem
Blo01g01126 Blo-Chr1:40554358 Blo03g00234 Blo-Chr3:5154183 0 transposed
Blo10g00488 Blo-Chr10:10392731 Blo03g00234 Blo-Chr3:5154183 1.38E-152 transposed
Blo07g00657 Blo-Chr7:21540106 Blo03g00234 Blo-Chr3:5154183 1.19E-154 transposed
Blo02g01131 Blo-Chr2:42644316 Blo03g00234 Blo-Chr3:5154183 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00234 - - fve:101299474 1122.46