Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00235 ATGGCTGGGAATGCAACAGTTTGTCCAGCGCCAATGAAAGCCACCTCCAATGGCTTGTTTCAAGGAGATAATCCTCTTCATTTTTCTCTACCCCTTGTCATCGTGCAGATATGCCTCGTGGTTATTCTCACTCGTCTTCTTGCTTTTATTTTCCGTCCATTGAGACAGCCTCGGGTGATTGCTGAGATTGTTGGAGGAATATTACTTGGTCCATCAGTTTTGGGTCGAAACACGCACTATTTAAACACAATTTTCCCAGCAAAAAGCCTCACAGTCTTAGACACCTTAGCCAATATGGGCCTCCTCTTCTTCCTCTTCCTCGTAGGCCTGGAGTTAGACCCAAAATCTCTCCGCCGAACTGGTAAAAAAGCTTTAAGCATAGCAGCGGCAGGAATATCCCTTCCATTTCTTCTGGGAATTGGAACATCTTTTGTGCTCAAAGGAACTATTTCTAAAGGAGTCAATGGACCTCCTTTTCTTGTTTTCATGGGTGTTGCTCTGTCTATCACAGCCTTCCCTGTCTTAGCTCGTATTTTAGCCGAACTCAAGCTCTTAACCACTGATGTGGGCCGAATGGCCATGTCCGCAGCAGCAGTAAACGATGTCGCAGCTTGGATTCTCCTCGCTCTCGCCATTGCCCTTTCTGGAACTGATCGTTCGCCTCTTGTCTCTCTCTATGTTTTCTTATGTGGTAGTGCCTTTGTCGTTGTTTGTATATTCTCTTGTCCCCGCATTTTCAAATGGATGGCTCGGCGATGTCCAGATGGTGAGCCGGTCAATGAATTATACGTCTGTGCCACTTTAGTCATTGTTTTGGCGGCCGGCTTTATCACAGATATGGTCGGAATTCATGCCATTTTCGGCGCGTTTGTGATCGGAGTTCTTGTGCCGAAGGAAGGGCCATTTGCAGGGGCTCTAGTGGAAAAAGTTGAGGATCTGGTTTCGGGCTTGTTCCTTCCTTTATACTTTGTTTCAAGTGGTTTGAAGACTAATATAGCTACCATTCAAGGAGCTCAATCATGGGGCCTCCTCGTTTTAGTCATTGTTACAGCTTGCTTTGGGAAAATTGTGGGTACTTTGATTGCTTCCTTCCTCTGCAAGATGCCTTTTGCTGAAGCAGTGACCCTAGGATTCTTGATGAACACCAAAGGGTTGGTCGAGCTCATTGTCCTCAACATTGGAAAAGACAGAAAGGTACTAAATGATCAAACTTTTGCCATCATGGTTCTAATGGCGATCTTCACGACCTTCATCACCACTCCGATAGTTATGGCGGTTTATAAACCGGCCAAAAGGGCGAGTAGGGAGGATTACAAGATCAGAACAGTCGCCAGAAAAAAGCCGAACACTCAGCTGAGGATTTTAGCCTGTTTCCACACCAATAGAAACATACCCACCATGATTAACCTCATTGAAGCTTCTCGAGGAACAGATAAGAGGGAAGGACTCTGCGTATATGCACTGCACATGCTCGAACTCTCAGAGAGATCTTCCGCCATTTTAATGGTCCACAAAGCTAGAAAGAACGGATTGCCGTTCTGGAATAAAGGGCCCCGATCAGACTCTGACCAAGTCATCGTTGCTTTCGAAGCTTTCCGGCAGCTTAGCAGAGTCTCAATTCGTCCGATGACGGCGATATCTTCCTTGTCGGAAATGCACGATGATATCTGTGGAAGTGCAGAGAGAAAAAGAGCAGCGATCATAATCCTTCCGTATCATAAGCATCAGAGAATCGACGGGACTTTCGAGACTACTATGCCGGAGTACCGATTAGTTAACCGGAGAGTTCTGGATCACGCTCCCTGTTCCGTTGGAATCCTGATCGATCGGGGGCTCGGAGGAGGCAGCCATGTCTCGGCAAGCAATCTTTCCTCAAGCTTGACTGTTATCTTCTTCGGCGGCCGAGACGACCGCGAAGCTCTCGCTTATGGGTGTAGAATGGCGGAGCATCCCGGAATTACTCTCACTCTCGTTCGCTTCCTTGAAGGCTCCGAAGCCACCCGAGAAATCCCCGGTGTCGAGATCAATCCAACTTCAATCCCCCATTCAACGGAAATGGAGGACGATGAAGCAATTAACGAATTCAAGAACATAATGAAAACCGCCGGAGAAGAGTCGATCAAGTATATAGAGAGAGTGGTAAGAAACGGAATGGAGACCATTGACGCAATCAGAGAGTCCAGTAAATGCAATCTCATCTTAATCGGAAAAAATCCGGAAGGGAGAGTAGTTTCCGCCATTAACGTGAAGATGGACCACTGTGAGCTCGGCCCAGTCGGAAACGTACTGACCTCACCGGAATGCTCAACGGGGGCGTCGGTGTTGGTTGTTCAGCAGTACCATGGTCAGAGAGTAATATCAAGTTCCGGTGGAGTTTCAGGGACAGTAGTTTTGCCTGAGGAAGACCCAGAAATGCGCTGA 2421 47.38 MAGNATVCPAPMKATSNGLFQGDNPLHFSLPLVIVQICLVVILTRLLAFIFRPLRQPRVIAEIVGGILLGPSVLGRNTHYLNTIFPAKSLTVLDTLANMGLLFFLFLVGLELDPKSLRRTGKKALSIAAAGISLPFLLGIGTSFVLKGTISKGVNGPPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTDRSPLVSLYVFLCGSAFVVVCIFSCPRIFKWMARRCPDGEPVNELYVCATLVIVLAAGFITDMVGIHAIFGAFVIGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIQGAQSWGLLVLVIVTACFGKIVGTLIASFLCKMPFAEAVTLGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPIVMAVYKPAKRASREDYKIRTVARKKPNTQLRILACFHTNRNIPTMINLIEASRGTDKREGLCVYALHMLELSERSSAILMVHKARKNGLPFWNKGPRSDSDQVIVAFEAFRQLSRVSIRPMTAISSLSEMHDDICGSAERKRAAIIILPYHKHQRIDGTFETTMPEYRLVNRRVLDHAPCSVGILIDRGLGGGSHVSASNLSSSLTVIFFGGRDDREALAYGCRMAEHPGITLTLVRFLEGSEATREIPGVEINPTSIPHSTEMEDDEAINEFKNIMKTAGEESIKYIERVVRNGMETIDAIRESSKCNLILIGKNPEGRVVSAINVKMDHCELGPVGNVLTSPECSTGASVLVVQQYHGQRVISSSGGVSGTVVLPEEDPEMR 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5160484 5163141 - BLOR11416 Blo03g00235 57699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00235 806 PANTHER CATION/H + ANTIPORTER 5 787 - -
Blo03g00235 806 PANTHER CATION/H(+) ANTIPORTER 18 5 787 - -
Blo03g00235 806 Gene3D - 32 437 IPR038770 -
Blo03g00235 806 Pfam Sodium/hydrogen exchanger family 39 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo03g00235 806 Gene3D - 479 747 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01126 Blo-Chr1:40554358 Blo03g00235 Blo-Chr3:5160484 0 dispersed
Blo02g01131 Blo-Chr2:42644316 Blo03g00235 Blo-Chr3:5160484 0 dispersed
Blo03g00235 Blo-Chr3:5160484 Blo05g00511 Blo-Chr5:8749897 0 dispersed
Blo03g00234 Blo-Chr3:5154183 Blo03g00235 Blo-Chr3:5160484 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00235 - - jre:108997299 1159.44