Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g00284 | ATGGCGCAGGCGATTCAGAATGATGTTGAAATCGAGGGTTTTGAGAGGGGTGGCTCTGAAGTGTCAGAGGATAGAGACTCTGTCGTTGTGACGATGAATGAACCTCTGTTGCTTCGTAAAAGTAGCAGGATCAACAAAACCTCTCAGCTCGCCATTGTTGGCGCCAATGTCTGCCCCATTGAAAGCCTCGACTACGAGATCGCAGAGAATGATCTTTTCAAGCAGGACTGGAGATCCAGAACAAAGACAGAGATATTTCAATATGTTGTCCTCAAATGGACGCTTGCCCTTCTTATTGGTGTCAGCACAGGACTTGTTGGCTTCTTCAATAATCTTGCTGTCGAAAATATAGCTGGGTTCAAACTACTGCTTACTAACAACTTCATGGTTCAGAACAAGTTTTATCATGCATTTGCAGCACTTGCTAGTTGCAACATGGTTTTGGCTGTTGCTGCATCTGCACTATGTGCCTACATTGCTCCTGCAGCTGCAGGCTCTGGCATACCAGAAGTGAAAGCGTACCTCAATGGGATAGATGCTCATTCCATGTTGGCCCCGACTACCCTCTTTGTAAAGATCTTTAGTTCCATTTTAGGTGTTGCTGCTGGATTCGTTGTTGGTAAGGAAGGACCTATGGTACATACTGGTGCATGCATAGCCTCTTTACTTGGACAAGGAGGCTCTAGAAAATACCACTTAACTTGGAAGTGGCTCAGATACTTCAAAAATGATAGGGATAGGCGGGATTTGATCACCTGTGGTGCTGCTGCTGGAGTAGCAGCTGCCTTCCGTGCCCCAGTGGAGGAGTGCTCTTCTTTGGAGAACCTTCTTTACAACTGCCGTAAAGAAGTGGTGTACAGCACCCCAGATTTACTGGCTGTGTTATTACTAGGAGTTCTCGGTGGTGTCTTTGGAAGCCTTTACAATTATTTTGTTGACAAGGTTCTCCGCACTTACAGCATCATCAATGAGAGAGGTCCTTCTGTTAAAATCCTACTTGTTGTTGCCATTTCTCTTTTGACTTCTTGCTGCTCTTACTGTCTTCCATGGCTCTCTATCTGCATACCTTGCCCTGCTCACTTGGAGGATCAGTGTCCCACCATAGGTCGCACTGGTAATTACAAGAGCTTTCAATGCCCTCCTAACCATTACAATGATCTTGCTTCGCTTTTCCTCAATACCAACGATGACGCAATTCGCAACCTGCTGAGCTCTGCTTCTGATAAGGAATTTCACCTCTCAACCCTAGCAATTTTCTTTGCTGGCATCTACTTTCTTGGCATTATCACTTATGGAATTGCTATTCCCTCTGGCCTCTTCATTCCCGTCATACTTGCTGGGTCATCTTATGGGCGCCTTGTTGGGACACTCGTTGGCTCTCTATCCAATCTTGATGTGGGTCTATTTGCTCTCCTCGGAGCTGCATCTTTTCTTGGTGGCACCATGAGAATGACTGTTTCTCTATGTGTCATCCTTCTTGAACTTACTAATGATCTTTTGATGCTACCATTGGTGATGCTTGTTCTTCTAATTTCAAAAACTGTAGGCGATTGTTTTAACAAAGGTGTCTATGACCAAATTGTCAAAATGAAGGGGTTGCCATACATGGAAGCCCATGCAGAGCCCTATATGAGACACTTGGTTGCCAGTGATGTCGTGTCTGGTCCGCTAATTACACTTTCTGGAGTAGAAAAAGTTGGAACCATAATGCATGCTTTGAAGATAACAAAACATAATGGATTCCCTGTTATCGATGAGCCCCCAATATCGGATGCTTCGGAATTGTGTGGGCTTGTTCTCAGGTCTCATCTTCTTGTTTTGCTCAAAGGGAAGAATTTCACGAAGTATAAAGGGACTACTGGATCAGCAATAACGAGGAGATTTACAGCACATGATTTTGCAAAAGCAGGATCGGGTAAAGGGGTGAAGATGGGGGACTTGGATATCAAAGAGGATGAGATGGAGATGTATGTAGATCTCCATCCTATTACAAATACATCCCCTTATACCGTATTGGAAACAGTGTCTCTTGCTAAAGCAGCTATTCTCTTTCGCGACCTCGGCTTACGTCACTTATTGGTGGTGCCAAAGAAACAAGGGAAAGTACTGAAGGTCTGGAAACAGATAGCTAGCTTGAAGGTTGGTACCAATGGAAGTGGTGTTGGAGCTACTGCAAATCGTCTCAATTTCCTGACCCAATTCCCGCCTTATTCTAAAACAAGGGTCAACTCCCTCCGTAACATCCTTATTGAATTGAAGAAAGACTTCATATGTGCTGCCATACACTCGTATCCTGTCGGAAACCCAAATAAAACCTCATTTGCCGCTGACAACTCCATAGCCGCTATCACCGAAATCGTCGGTTCCTTAAGCGGAGCTTGCATCTTCTTAAAAACTTCCTCTGGCAACAACTTTTCTTATGGCGCTGCTAGTTTACCTGGTAAGCTTGGAACTTCCTCCTGTTTGATTCTCATCCCTTTGCTCACTTTGGGTTCAAATTCTTGTTCCTCGGCCTTGTGCTCACCCATACTGATAGCAATATAG | 2544 | 44.61 | MAQAIQNDVEIEGFERGGSEVSEDRDSVVVTMNEPLLLRKSSRINKTSQLAIVGANVCPIESLDYEIAENDLFKQDWRSRTKTEIFQYVVLKWTLALLIGVSTGLVGFFNNLAVENIAGFKLLLTNNFMVQNKFYHAFAALASCNMVLAVAASALCAYIAPAAAGSGIPEVKAYLNGIDAHSMLAPTTLFVKIFSSILGVAAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVEECSSLENLLYNCRKEVVYSTPDLLAVLLLGVLGGVFGSLYNYFVDKVLRTYSIINERGPSVKILLVVAISLLTSCCSYCLPWLSICIPCPAHLEDQCPTIGRTGNYKSFQCPPNHYNDLASLFLNTNDDAIRNLLSSASDKEFHLSTLAIFFAGIYFLGIITYGIAIPSGLFIPVILAGSSYGRLVGTLVGSLSNLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLMLPLVMLVLLISKTVGDCFNKGVYDQIVKMKGLPYMEAHAEPYMRHLVASDVVSGPLITLSGVEKVGTIMHALKITKHNGFPVIDEPPISDASELCGLVLRSHLLVLLKGKNFTKYKGTTGSAITRRFTAHDFAKAGSGKGVKMGDLDIKEDEMEMYVDLHPITNTSPYTVLETVSLAKAAILFRDLGLRHLLVVPKKQGKVLKVWKQIASLKVGTNGSGVGATANRLNFLTQFPPYSKTRVNSLRNILIELKKDFICAAIHSYPVGNPNKTSFAADNSIAAITEIVGSLSGACIFLKTSSGNNFSYGAASLPGKLGTSSCLILIPLLTLGSNSCSSALCSPILIAI | 847 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5732060 | 5738336 | - | BLOR11465 | Blo03g00284 | 57748 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g00284 | 847 | Gene3D | Clc chloride channel | 270 | 537 | - | - | |
Blo03g00284 | 847 | SUPERFAMILY | Clc chloride channel | 70 | 538 | IPR014743 | - | |
Blo03g00284 | 847 | SMART | cbs_1 | 667 | 713 | IPR000644 | - | |
Blo03g00284 | 847 | SMART | cbs_1 | 556 | 609 | IPR000644 | - | |
Blo03g00284 | 847 | Gene3D | Clc chloride channel | 84 | 269 | - | - | |
Blo03g00284 | 847 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 5 | 269 | - | - | |
Blo03g00284 | 847 | SUPERFAMILY | CBS-domain pair | 540 | 702 | IPR046342 | - | |
Blo03g00284 | 847 | PRINTS | Chloride channel signature | 485 | 504 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | PRINTS | Chloride channel signature | 256 | 275 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | PRINTS | Chloride channel signature | 467 | 483 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | PRINTS | Chloride channel signature | 523 | 537 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | PRINTS | Chloride channel signature | 161 | 178 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | PRINTS | Chloride channel signature | 192 | 211 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | PRINTS | Chloride channel signature | 435 | 455 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | Pfam | Voltage gated chloride channel | 276 | 516 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | Pfam | Voltage gated chloride channel | 149 | 267 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Blo03g00284 | 847 | PANTHER | CHLORIDE CHANNEL PROTEIN | 285 | 702 | - | - | |
Blo03g00284 | 847 | PANTHER | CHLORIDE CHANNEL PROTEIN | 5 | 269 | - | - | |
Blo03g00284 | 847 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 549 | 703 | - | - | |
Blo03g00284 | 847 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 285 | 702 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00284 | Blo-Chr3:5732060 | Blo16g00894 | Blo-Chr16:36620751 | 0 | dispersed | |
Blo08g00572 | Blo-Chr8:19349554 | Blo03g00284 | Blo-Chr3:5732060 | 3.62E-32 | transposed | |
Blo02g01193 | Blo-Chr2:43656855 | Blo03g00284 | Blo-Chr3:5732060 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g00284 | K05016 | - | jre:108988922 | 1056.97 |