Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00287 ATGGCTCTAGTGAGTTTTTATTTTGATTTCCCTGTTTCTTATTTCACTGTTTTTATTTCCAGCGAAAAGCTTGCAAGCTTCTACATGAAGTTTGAAGCTCGGGGAGAATTTCTTCTTTTATTGGTCTTGCATTCAGGGAAGCCAAATAAAAATATTTTCAAGACTCTTATTGCTGCAGAGTATGTTGGCATTCAAGTCGAATTAGTCTCAAATTTTGAGATGGGTGTTTCAAATAAAACTCCAGAATTTATTAAGATGAACCCTATAGGGAAGGTCCCTGTGCTGGAGACACCTGATGGTCCCATATTTGAGAGCAATGCCATAGCAAGATACGTTTCTCGTATGAAGAACCATTGCAATCTATTTGGCTCCTCTCCTATTGATTATGGCCACGTTGAGCAGTGGATTGATTTTGCATCATTAGAAATTGATGTCCACTTTGTGACATGGTTTAGACCAAGATGGGGTTCTGCACCCTATCTTCCACCTGTCGAGGAAGCTGCTATCTCTGCTTTGAAAAGAGCACTTGGTGCTTTGAATACTCATCTTGCTTCAAACACATATCTTGTGGGGCACTCTGTGACGCTGGCTGACATCATAATGACAGTTAACTTGTATTTTGGTTTTACTCAATTAATGCCAAAGAGCTTCACCTCAGAGTTCCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAACCAAACTTCAAAAAGGTTCTTGGTGAAGTGAAGCAAACTGAGGCTGTTCCACCAATTCCATCTGCAAAAAAGCCGTCCCAGCCTAGAGAGCCTGCTAAGCCAAAGGTTAAGGATGAGCCTAAGAAAGAAGTTAAGAAAGAGGTTAAGAAACAAGAGGCAAAGGAAAAGCCAAAAGTGGAAGCTGGCGAGGAAGAAGAAGAAGAAGCACCAAAGCCTAAACCTAAAAATCCCCTTGATCTGTTACCTCCCAGTCCAATGGTACTGGATGAATGGAAACGGCTCTACTCTAACACAAAGACCAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGATCCGGAGGGTTATTCTCTTTGGTTCTGTGATTACAAATACCAAGATGAGAACACAGTGTCCTTTGTTACACTGAACAAGGTCAGTGGTTTTCTTCAGCGCATGGATCTTGCTAGGAAATATGCATTTGGGAAGATGCTAGTGATTGGGTCAGACGCACCATTTAAAGTGAAGGGTCTATGGCTTTTCCGTGGGAAAGAAATACCTCAATTTGTGGTTGATGAGTGCTATGACATGGAACTTTACGAATGGACGAAAGTTGATATCTCAGACGAAACCCAAAAGGAGCGAGTGAGCCAGATGATTGAAGATCACGAGCCTTTTGAAGGAGAATTGCTTTTGGATGCAAAATGTTTCAAGTAA 1407 41.51 MALVSFYFDFPVSYFTVFISSEKLASFYMKFEARGEFLLLLVLHSGKPNKNIFKTLIAAEYVGIQVELVSNFEMGVSNKTPEFIKMNPIGKVPVLETPDGPIFESNAIARYVSRMKNHCNLFGSSPIDYGHVEQWIDFASLEIDVHFVTWFRPRWGSAPYLPPVEEAAISALKRALGALNTHLASNTYLVGHSVTLADIIMTVNLYFGFTQLMPKSFTSEFPHVERYFWTLVNQPNFKKVLGEVKQTEAVPPIPSAKKPSQPREPAKPKVKDEPKKEVKKEVKKQEAKEKPKVEAGEEEEEEAPKPKPKNPLDLLPPSPMVLDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYQDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLVIGSDAPFKVKGLWLFRGKEIPQFVVDECYDMELYEWTKVDISDETQKERVSQMIEDHEPFEGELLLDAKCFK 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5762138 5765226 + BLOR11468 Blo03g00287 57751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00287 468 SUPERFAMILY eEF1-gamma domain 308 468 IPR036433 GO:0003746|GO:0006414
Blo03g00287 468 Pfam Glutathione S-transferase, C-terminal domain 165 235 IPR004046 -
Blo03g00287 468 SFLD Main (cytGST) 41 228 - -
Blo03g00287 468 MobiDBLite consensus disorder prediction 262 308 - -
Blo03g00287 468 Gene3D - 119 252 - -
Blo03g00287 468 SUPERFAMILY GST C-terminal domain-like 116 251 IPR036282 -
Blo03g00287 468 SFLD Glutathione Transferase (cytosolic) 41 228 IPR040079 -
Blo03g00287 468 Pfam Elongation factor 1 gamma, conserved domain 307 415 IPR001662 GO:0003746|GO:0006414
Blo03g00287 468 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 39 120 IPR004045 -
Blo03g00287 468 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 308 468 IPR001662 GO:0003746|GO:0006414
Blo03g00287 468 Pfam Glutathione S-transferase, N-terminal domain 48 114 IPR004045 -
Blo03g00287 468 SUPERFAMILY Thioredoxin-like 40 122 IPR036249 -
Blo03g00287 468 SMART EF1G_2 307 415 IPR001662 GO:0003746|GO:0006414
Blo03g00287 468 MobiDBLite consensus disorder prediction 248 316 - -
Blo03g00287 468 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 125 253 IPR010987 -
Blo03g00287 468 CDD GST_C_EF1Bgamma_like 128 248 - -
Blo03g00287 468 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 308 468 IPR036433 GO:0003746|GO:0006414
Blo03g00287 468 PANTHER - 41 468 - -
Blo03g00287 468 Gene3D Glutaredoxin 38 112 - -
Blo03g00287 468 CDD GST_N_EF1Bgamma 41 114 - -
Blo03g00287 468 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 41 468 IPR044628 GO:0004364
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01196 Blo03g00287 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00287 Blo-Chr3:5762138 Blo11g00375 Blo-Chr11:3211466 1.23E-10 dispersed
Blo02g01196 Blo-Chr2:43755700 Blo03g00287 Blo-Chr3:5762138 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00287 K03233 - zju:107412556 676.011