Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00295 ATGTGGAATGAAGGTCTAAGAGTTCAAATGTTTGCCGAGGATATCGTTGTTCGCGATGAAAATGCCGATGCCCATGATCAAGTCTTATGTAATCTATCCCCTTCCTTCCTTCTTCCTTCCGGCTTCACTACCGGCTTGATTCCTTCTCACCCTCCCTCTCATGGTACTTCTATGATCATTTCCCCTCCATTCCAAGCTAGGGCTTCCCCTGACATGGCCTCCTCCTCTCAGTCTCCCAGCTGGCGGGAGGGCATGTCTTCTGATAACATTAAAGGCTTGGTCCTCGCGCTTTCCTCCAGCTTCTTCATCGGGGCCAGCTTCATCGTCAAAAAGAAGGGTTTGAAGAAGGCCGGCGCCTCCGGCGTCAGGGCAGGCGTTGGTGGTTATTCATACTTATATGAGCCTCTTTGGTGGGTGGGCATGATAACAATGATTGTTGGGGAAATCGCTAATTTTGCAGCTTATGCATTTGCACCTGCTATACTGGTCACCCCTCTTGGTGCTCTCAGCATAATAATCAGTGCTGCACTGGCTCATATTATTTTGAGGGAGAGGCTTCATATATTTGGAATTCTTGGCTGTATTCTTTGTGTTGTGGGTTCTACAACAATTGTTCTCCATGCACCTCAAGAGCGTGAAATTGAATCTGTTACTGAAGTATGGCAATTGGCTATGGATCCAGCGTTTCTCCTATATGCAGTCTTGGTTGTAGCAGCAGCAGTTATACTTATTATTCACTTTATACCTCAATATGGCCAGACACACATTATGGTTTACATCGGAGTTTGTTCTCTTGTGGGTTCGCTGTCGGTCATGAGTGTTAAAGCGCTTGGAATTGCTTTGAAGTTAACATTGTCCGGCATGAATCAGCTTATTTATCCCCAAACTTGGATATTCACCGTAGTTGTTATTACTTGTGTGCTTACTCAAATGAATTATTTAAACAAGGCACTAGATACATTCAACACAGCTGTTGTATCACCAATTTACTATGTCATGTTCACGTCACTTACCATTTTGGCTAGTGTGATCATGTTCAAGGATTGGGATAGACAGAGCCCGACTCAAGTTGTGACAGAAATGTGTGGGTTTGTGACAATCCTTTCGGGAACTTTTCTTCTTCACAAAACGAAGGATATGGCTGATGTGCTGACTCGGGATAAGATTTCTGCCCCCTTACGCATCATCGTTGATGCTGATGCTGCCCGATTTAGATTTGTCCTCAAAAACACTCCTACCACAAAAGTTGGTGATGTTGAAAGCAAGCAGGTAGGCGCAGAAGTGGAAGCGGGTTTCCTTGCTCTCTAG 1308 44.95 MWNEGLRVQMFAEDIVVRDENADAHDQVLCNLSPSFLLPSGFTTGLIPSHPPSHGTSMIISPPFQARASPDMASSSQSPSWREGMSSDNIKGLVLALSSSFFIGASFIVKKKGLKKAGASGVRAGVGGYSYLYEPLWWVGMITMIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHIILRERLHIFGILGCILCVVGSTTIVLHAPQEREIESVTEVWQLAMDPAFLLYAVLVVAAAVILIIHFIPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTLSGMNQLIYPQTWIFTVVVITCVLTQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQSPTQVVTEMCGFVTILSGTFLLHKTKDMADVLTRDKISAPLRIIVDADAARFRFVLKNTPTTKVGDVESKQVGAEVEAGFLAL 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5844833 5852084 + BLOR11476 Blo03g00295 57759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00295 435 SUPERFAMILY Multidrug resistance efflux transporter EmrE 135 208 - -
Blo03g00295 435 PANTHER MAGNESIUM TRANSPORTER-RELATED 82 407 - -
Blo03g00295 435 Pfam Magnesium transporter NIPA 88 380 IPR008521 GO:0015095|GO:0015693|GO:0016021
Blo03g00295 435 PANTHER UNCHARACTERIZED 82 407 IPR008521 GO:0015095|GO:0015693|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g01204 Blo03g00295 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00295 Blo-Chr3:5844833 Blo16g00671 Blo-Chr16:26240429 2.20E-161 dispersed
Blo03g01383 Blo-Chr3:40287661 Blo03g00295 Blo-Chr3:5844833 3.81E-132 transposed
Blo02g01204 Blo-Chr2:43821536 Blo03g00295 Blo-Chr3:5844833 3.32E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00295 K22733 - csv:101210534 536.569