Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00296 ATGGGGAAGGGTCTCTGCTCTTTTCGCCTCACCAACCCCCGTCGTCGCTCTAAAACCAAGCATCACCCTCATCCCTCCCCTCCTTCATCGCTTCCTGGCACCAGTTCCCCGCCGAACAACGGCCTGATTGCTACCGCTGCTGCTGCTGCTGCTGGGGCGGCCGCAGCCAAGGGGAAGAAGAAGGCTGGTGGACCCAGGCTGTGGATGCGTTTTGACCGATGGGGCCGCTCCGAGATGGTAGAGTGCGATAAGAGCGCTATTATCCGGCTTGCTGGGATTCCTGCCCGGGATTTGAGGATTCTTGGTCCTGTTTTCTCTCAATCGTCCAATATTCTTGGCAGAGAGAAGGCCATGGTTGTTAACTTAGAGTTTATAAAGGCAATAGTTACTGCAGAAGAAGTGCTTTTACTTGAGCCCCTTCGTCAGGAGGTTCTTCCATTTGTGGATCAGCTACGACAGCAACTTCCTCAGAAGTGTCCATCTAGGACTCACGGAACTGAAACTTTGGAAGAACAAGAGAATGATGTGCATGTTTTGACCGGTAGGCAATGGTTGCCTGTGTCGGAAACAGCTGAAGCTTTGAACAGTGAGCTCCCATTTGAGTTTCAGGTTCTGGAAATTGCATTAGAGGTTGTTTGTTCATACTTAGACTTGAGGGTGGCAGAGCTTGAGACAGATGCATACCCCGTTCTTGATGAACTGGCAAGGAATGTCAGCACCAAAAATCTTGAACACGTGAGAAGTTTAAAAAGCAATCTTACTCGACTACTTGCACGCGTGCAAAAGATCTGCACAAATGAGGATGACAATGGTTGTGATGACACTGGCACTGTTACGGTGAGGGATGAAATCGAACATCTATTGGATGACAATGAAGACATGGCACATTTATATTTAACAAGGAAGTGGATGCAGAATCAACAATCCTTGGCTTCGTCGGGCGGTGTAGCCTGCAATAGTTTATCTGCTCCTTCCTCCCATCTTCGTCGACTTAATTCTACGCGGAGCGGGAGTTTGACGGCTAGCAATCATTTGGAAGATAATGATGTAGAAGATCTTGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATTTAACGCGCAATAAGATACTATCGGTTCGGGAGTACATAGACGACACGGAGGACTACGTGAACATTCAACTGGACAACCAGCGAAATGAACTTATTCAACTTCAGTTGATACTGACCATCGCATCATTTGCCATAACAATCGAAACTTTGATTTCTGGACTGTTTGGAATGAACATCCCCTGCACCCTCTACAATTCCAATGGGATATTTGGGTACTTTGTGTCAGCAATGACGGCATTCAGTGTATCGATATTCCTGCTTGTTTTAGGATATGCAAGATGGAAGAAGCTACTTGGTTCCTAA 1398 46.92 MGKGLCSFRLTNPRRRSKTKHHPHPSPPSSLPGTSSPPNNGLIATAAAAAAGAAAAKGKKKAGGPRLWMRFDRWGRSEMVECDKSAIIRLAGIPARDLRILGPVFSQSSNILGREKAMVVNLEFIKAIVTAEEVLLLEPLRQEVLPFVDQLRQQLPQKCPSRTHGTETLEEQENDVHVLTGRQWLPVSETAEALNSELPFEFQVLEIALEVVCSYLDLRVAELETDAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKICTNEDDNGCDDTGTVTVRDEIEHLLDDNEDMAHLYLTRKWMQNQQSLASSGGVACNSLSAPSSHLRRLNSTRSGSLTASNHLEDNDVEDLEMLLEAYFMQLDLTRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLILTIASFAITIETLISGLFGMNIPCTLYNSNGIFGYFVSAMTAFSVSIFLLVLGYARWKKLLGS 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5852341 5854761 - BLOR11477 Blo03g00296 57760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00296 465 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 401 451 IPR045863 -
Blo03g00296 465 MobiDBLite consensus disorder prediction 1 41 - -
Blo03g00296 465 Gene3D - 56 139 - -
Blo03g00296 465 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 7 465 IPR039204 -
Blo03g00296 465 CDD Mrs2_Mfm1p-like 68 462 IPR039204 -
Blo03g00296 465 Gene3D Magnesium transport protein CorA, transmembrane region 140 396 - -
Blo03g00296 465 Pfam CorA-like Mg2+ transporter protein 351 455 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Blo03g00296 465 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 7 465 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00296 Blo-Chr3:5852341 Blo10g00506 Blo-Chr10:11257200 2.15E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00296 K16075 - zju:107415174 597.816