Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00302 ATGAGTGGAGTTAGTTCCTGGAGTACGGAGATGAGACTCGGGAGAAATGATCTTGACTTGGAATCAAGCACCACAAAGAAAAATGGATCGGAGCCATGGATTGGTCACGACCAGAAACAAGAAGAAGAAGAAGAAGATGAAGAAGAAATGCCATCTTCTCTAAGCTTGAGAGATCTGTCTAAACTCATTCTTCCTCCTCTGGGTGTTTCCAGCTACAGCCAAACTCACCGATACTCCAAAGGATGGATCATCCTACCAATGGATTCAAGATACAGATGCTGGGGAAGCTTGATGGTGCTTCTGGTTGGTTATAGTGCTTGGAGCTTCCCCTTCGAGGTTGCCTTTTTACGCGCATCTTCAACAAAAGGACTCTTTATAGCCGATAACATCGTCGACTTCTTCTTTACAATCGACATCGTCTTGACATTCTTCGTGGCGTACATCGATCCGAGGACATCACTTCTGGTTCGTGACTCCAAGAAAATAGTGAAAAGGTACCTGGCAACATGGTTTCTGATGGACGTAGCATCGACGATCCCATTTGAAGCAATAGCCTATTTGTTCACAGGCAAGCGTAATATATGCCTCTCCTATTCTCTCCTCGGAGTGCTTAGATTTTGGAGGCTTCGACGCGTCAAGCAATTCTTCACCAGGCTGGAGAAGGATATAAGATTTAGCTATTTCTGGATCCGATGCGCTAGGCTTCTATTTGTGACGCTGTTTTCGATTCACTGTGCTGGGTGCCTGTACTACCTGTTAGCAGACAGGTATCCACATGGAGGAAGGACTTGGATCGGAGCTATAAATCCTAACTTCAGAGAGATGAGTTTGTGGATGAGATACGTTTTGGCTTTATACTGGTCTGTTACCACCATGACCACGGTCGGCTATGGAGATGTCCATGCGGTCAACACTAGCGAAATGGTTTTCAACGTATTCTACATGCTCTTCAATCTCGGTCTCACTGCGTATTTGATCGGCAACATGACCAACTTAGTCGTCGAGGGAACCCGAAGAACCATGGAATTTAGAAATAGCATCGAAGAAGCGTCGAGCTTTGTGAAGCGAAACCGATTGCCGCCGAGTTTGAAGGAGCATATACTGGCTTATATGTACTTGAGGTTCAAGGCCGACAGCTTGAATCAGCACCAACTTATGGAGCAGCTCCCAAAATCCATATGCAATGGCATTTATCAGCACCTGTTTTTTCCGATGGTGAAGAAGGTCTATCTGTTCTCCGGTGTGTCGAGTGAGACGCTCAAGCTCCTGGTGGCGAACATGACGGCGGAGTACATTCCGCCGAAAGAGGACGTGATGATGCACACGGAGCTGCCCATTGATATCTACATCATCGTGTCTGGGGAAGTGGAGATTATCAAGTGTGAGATTAACAAGTGTGAGAGCATTGTTGGGACATTACACTGTGGAGACATGTTTGGAGAGTGGGGAGCTCTGTGTTCCAAGCCTCACGCTTTCACGTACAGAACAAAGACACTTTCTCAACTCTTGAGACTCAAGGCAACTCATCTGATAGAAGCCATGGAAACTCGACAAGTAGATCGCCTGCTCATTCTCGCAAACTTCATTCAGAGATGCAACGGGAGCGTCAACGAAAAGAGAATATACGAGAGTTGGTCGGAAAGCAGACCGGAGACGTTTGGAGAAAGCGAGGGGGAGAACAGTTGGAGGGCCAAGAGCTACAGCGGAGCAGATGTTGTACTAAGAGTGAGCATATACAGAGGTCACCCCGTTGTTAGGAAACAAAGGGGCGTCGACGAAGCCGGAAGGCTCGTAAGGCTGCCTAACACCATGGAGGAGCTCAAGAACATGGCTGGTAAAGTATTTGGAATGGAGGGACGCGGGGGGAGGAAGGTGACAAACGAAGAAGGCACAGAGATCGAGTGCATTGAAGTCATCAGAGACAATGACAAACTCTTCATATTTGAAGATCATCCCATCTTGTAG 1965 47.12 MSGVSSWSTEMRLGRNDLDLESSTTKKNGSEPWIGHDQKQEEEEEDEEEMPSSLSLRDLSKLILPPLGVSSYSQTHRYSKGWIILPMDSRYRCWGSLMVLLVGYSAWSFPFEVAFLRASSTKGLFIADNIVDFFFTIDIVLTFFVAYIDPRTSLLVRDSKKIVKRYLATWFLMDVASTIPFEAIAYLFTGKRNICLSYSLLGVLRFWRLRRVKQFFTRLEKDIRFSYFWIRCARLLFVTLFSIHCAGCLYYLLADRYPHGGRTWIGAINPNFREMSLWMRYVLALYWSVTTMTTVGYGDVHAVNTSEMVFNVFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEEASSFVKRNRLPPSLKEHILAYMYLRFKADSLNQHQLMEQLPKSICNGIYQHLFFPMVKKVYLFSGVSSETLKLLVANMTAEYIPPKEDVMMHTELPIDIYIIVSGEVEIIKCEINKCESIVGTLHCGDMFGEWGALCSKPHAFTYRTKTLSQLLRLKATHLIEAMETRQVDRLLILANFIQRCNGSVNEKRIYESWSESRPETFGESEGENSWRAKSYSGADVVLRVSIYRGHPVVRKQRGVDEAGRLVRLPNTMEELKNMAGKVFGMEGRGGRKVTNEEGTEIECIEVIRDNDKLFIFEDHPIL 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5890035 5892790 - BLOR11483 Blo03g00302 57766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00302 654 PANTHER POTASSIUM CHANNEL AKT1 572 650 IPR045319 GO:0005249|GO:0006813
Blo03g00302 654 Pfam Ion transport protein 92 340 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Blo03g00302 654 PANTHER POTASSIUM CHANNEL AKT2/3 58 533 - -
Blo03g00302 654 PANTHER POTASSIUM CHANNEL AKT2/3 572 650 - -
Blo03g00302 654 Gene3D Jelly Rolls 404 540 IPR014710 -
Blo03g00302 654 CDD CAP_ED 411 525 IPR000595 -
Blo03g00302 654 PRINTS EAG/ELK/ERG potassium channel family signature 128 138 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo03g00302 654 PRINTS EAG/ELK/ERG potassium channel family signature 325 334 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo03g00302 654 PRINTS EAG/ELK/ERG potassium channel family signature 307 318 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo03g00302 654 PRINTS EAG/ELK/ERG potassium channel family signature 139 148 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo03g00302 654 PRINTS EAG/ELK/ERG potassium channel family signature 281 298 IPR003938 GO:0005249|GO:0006813|GO:0016020
Blo03g00302 654 SMART cnmp_10 411 529 IPR000595 -
Blo03g00302 654 MobiDBLite consensus disorder prediction 1 51 - -
Blo03g00302 654 Pfam KHA, dimerisation domain of potassium ion channel 575 647 IPR021789 -
Blo03g00302 654 Pfam Cyclic nucleotide-binding domain 441 516 IPR000595 -
Blo03g00302 654 SUPERFAMILY Voltage-gated potassium channels 86 334 - -
Blo03g00302 654 SUPERFAMILY cAMP-binding domain-like 338 531 IPR018490 -
Blo03g00302 654 PANTHER POTASSIUM CHANNEL AKT1 58 533 IPR045319 GO:0005249|GO:0006813
Blo03g00302 654 Gene3D Helix hairpin bin 337 400 - -
Blo03g00302 654 ProSiteProfiles cAMP/cGMP binding motif profile. 411 531 IPR000595 -
Blo03g00302 654 ProSiteProfiles KHA domain profile. 575 654 IPR021789 -
Blo03g00302 654 Gene3D - 95 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00302 Blo-Chr3:5890035 Blo14g00462 Blo-Chr14:5703453 8.90E-06 dispersed
Blo03g00302 Blo-Chr3:5890035 Blo01g01357 Blo-Chr1:51536529 5.84E-168 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00302 K21867 - csv:101205212 778.474