Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00304 ATGGATCTGAGCTATGTCCTGACAATTCCATGGAGTTTTACGGACTGTGAAGCTAAGAATTTCAACCACTCCAGTACAACCCCTCGAAATGACACCACCGACAACCCATGTTGCCAGACCATCTTGTCCCTCTTTGGAATTGCCCTTTCCCAACACCTCAAAGAAACCTCTCAGTTTGATCTGTCCGACCTTCCCACCTCCATTTCCTGCCTCCATGATTTCCAATCCAAGCTTTCCTTGCTCTCTCTCCCCAACAATCTTGTCTCCTATTGTTTTGATCCTATGCAGTTTGTGATCACCCCTAATGTTTGTGCTCAAATTCAGTCAACCCGCGATTGGGTGGCCAAGCTTGGGCAAAGTACTCCTCTCGATACTGGGTGCCTCTCAGACCTCTCTGATCTCACCAACTGTGATTCCTGCGTCGAGGCTGCGTTTCGGGTCCAAAATACTTTGACTGGAATTGATGGGAATAAATCTCACTCCATTCATTGCTTTTACTTTGCTGTACTGTACGCTGCAGGAATTGTGAACGAGTTTGGGCCCCAGAGTGACGGCACTGTGACTTGTATTTTCGGGTTGCAGTTGAATTCTGAGCTGAGTCCAAAAAGTAAGGATCATTCAGCTCTTGTCTATGGCCTAACTGGTGCTGGGATTGCACTACTTACTATGTCTTTTCTTTTGGGTCTGTGTTTCTGTCATGGAAGAAGGTGGAGGGAAAGGATGGGGGGATCAAGCGTAAAGTTTGGGTATGAACTCGAAGATCAGGGGTGTAGGCCAGGGGTGAAGCCTAACACTGGTTCCATTTGGTTCAAAATTCAGGAACTTGAGAGGGCCACTGATAATTTTTCCCAGAAAAATTTCATTGGTAGAGGTGGATTTGGTGTAGTTTACAAAGGAACTTTGGCAAATGGAAGTCTTGTTGCAGTGAAGAAAGTGATAGAATCGGACTTCCAAGGGGATGTGGAATTTCGCAACGAGGTTGAAATAATTAGTAATTTGAAGCACAGAAATCTTGTTCCACTGAGAGGGTGTTGTGTGATTGATGGTGGTGGGGATGAAAATCAGAGATATCTTGTGTATGATTATATGCCAAATGGAAATCTGGACGACCATCTGTTTCCTTCGCCACATAATGGAGGCGGGGCTTTGTCGAAGCCATTGACGTGGCCTCAAAGGAAGAACATAATATTGGATGTGGCTAAGGGATTGGCTTATTTACATTATGGAGTAAAACCTGCAATCTATCATAGAGATATCAAGGCCACGAACATCCTTCTTGATGCGGACATGAGGGCAAGAGTAGCTGACTTTGGGCTGGCAAAGCAGAGCAGAGAAGGACAGTCTCATCTGACAACTCGAGTAGCAGGAACCCATGGATATTTAGCCCCGGAATATGCCCTGTATGGACAACTCACAGAGAAAAGTGACGTTTACAGCTTTGGAGTGGTGCTATTGGAGATCATGTGTGGAAGAAGAGCTCTTGATTTGACATCATCGGAACCGCCTCATGCTTGCTTGATCACTGATTGGGTCTGGTCGTTGACGAAGGCTGGAAGAGTCGAAGAGGCCTTAGACGCTTCGGTGTTCCAAAAAGAAGAAGATTCTTCAAATTCTAATCCCAAGTCAATAATGGAGAGATTTGTGCTGGTTGGGGTATTGTGTGCTCATATAATGGTGGCCCTGAGACCCACCATTTTAGATGCTCTCAAAATGTTGGAAGGAGATGTTGAAATTCCTCAAATTCGGGATCGGCCTCTGCCTCTCAGTCACCCTTCTTTTTACGACATTTCTCCGGCATTAAGTGGACCTCAGTTGTGCAGTGCAGACATGCTAAGATAA 1839 45.57 MDLSYVLTIPWSFTDCEAKNFNHSSTTPRNDTTDNPCCQTILSLFGIALSQHLKETSQFDLSDLPTSISCLHDFQSKLSLLSLPNNLVSYCFDPMQFVITPNVCAQIQSTRDWVAKLGQSTPLDTGCLSDLSDLTNCDSCVEAAFRVQNTLTGIDGNKSHSIHCFYFAVLYAAGIVNEFGPQSDGTVTCIFGLQLNSELSPKSKDHSALVYGLTGAGIALLTMSFLLGLCFCHGRRWRERMGGSSVKFGYELEDQGCRPGVKPNTGSIWFKIQELERATDNFSQKNFIGRGGFGVVYKGTLANGSLVAVKKVIESDFQGDVEFRNEVEIISNLKHRNLVPLRGCCVIDGGGDENQRYLVYDYMPNGNLDDHLFPSPHNGGGALSKPLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVLLEIMCGRRALDLTSSEPPHACLITDWVWSLTKAGRVEEALDASVFQKEEDSSNSNPKSIMERFVLVGVLCAHIMVALRPTILDALKMLEGDVEIPQIRDRPLPLSHPSFYDISPALSGPQLCSADMLR 612
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 5943773 5945611 - BLOR11485 Blo03g00304 57768
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00304 612 Pfam Protein kinase domain 283 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00304 612 SMART serkin_6 282 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00304 612 CDD STKc_IRAK 288 574 - -
Blo03g00304 612 Gene3D Transferase(Phosphotransferase) domain 1 363 583 - -
Blo03g00304 612 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 1 589 - -
Blo03g00304 612 ProSitePatterns Protein kinases ATP-binding region signature. 288 311 IPR017441 GO:0005524
Blo03g00304 612 Gene3D Phosphorylase Kinase; domain 1 256 362 - -
Blo03g00304 612 ProSiteProfiles Protein kinase domain profile. 282 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00304 612 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 589 - -
Blo03g00304 612 SUPERFAMILY Protein kinase-like (PK-like) 264 573 IPR011009 -
Blo03g00304 612 Pfam SPARK 1 165 IPR043891 -
Blo03g00304 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00304 Blo-Chr3:5943773 Blo05g00342 Blo-Chr5:3994794 1.39E-116 dispersed
Blo03g00304 Blo-Chr3:5943773 Blo15g00253 Blo-Chr15:2616308 9.49E-73 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84176 PF00069 Pkinase 9.60E-44 CL0016 Blo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00304 - - zju:107415189 878.626