Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00319 ATGTTATCTCTATCGCTCGGTCTGAGTTTGGATGATGAACCTCGTGGCTCACCCGACGGCTCGCCCTTTGCAACCCAAGCTCACGAACGGGTACGGTTAAGGTGGCCGAGAAAGACTCTCATACTTTTTGGCACTGGGTTCGAAGATTTTGACTTTCACGGATCCACCAGCGCTTCCACTTCAGGCCGTGCCTGGGGAATCTTCAAATGTAGTGTAGAAGAGATAAATTTCAGTGGTGATAATGCTGTGGATGCAGAATGGATGGCCTACTTGGGAGCTTTTTCTGCATTACGTTCTCTGAATCTTGCTGACTGCCATAGAATTACTAATTCTGCTCTTTGGTCTATATCAGGGATGGCTAGTTTGAAAGAGCTAGACCTTTCGAGATGTGTCAAGTTGACTGATGCTGGAATTATGCATCTTCTATCCATACCAACTCTAGAAAAGCTATCCATTTCAGAAACACGTGTAAGCTCACATGGTATTAAGCTTCTTGCTTCTCTGAGAAACTTGAGTTTCTTGGACTTAGGGGGTTTGCCTGTTACAGATCAATCATTGAGTTACCTTCAGGTCCTTACAAACCTCAAGTACCTCGACATATGGGGAAGTAAAATAACTGATCAAGGATCTATTGTGCTTCAAATGTTTACAATGTTAAGCTTCCTGAATCTTGCTTGGACTAGCGTCACTCAGTTGCCAAAATTGCCTTCTCTTGAAATCTTGAATATGAGCAATTGTACAATTAACTCTTCACAAAAAGGGTTTTGTAACAAAGTTCATTTACAGAAGCTTATTGCCTCTGGAGCAACATTTGTAAATGAGGATGAAATTTTGGGAAGCATTGAAGCCATTTCTCTGTGCATTCTGGATGTCTCAAACTCTTCCCTTCGGAGTTTCTCATTCTTACCTCAGATGAAAGCCCTGCAACACTTGGATCTTAGCTCTACCACGATCGAAAATGATTCCATGGAGCTCCTTGCATTTCTAGGACCTAGTTTGAAAACCTTAAATCTCAGCAACACCAAGGTTAACTCCCTGGGAGTTGGGATTTTGGCTGGAGAAGTACCCAATCTCGAAACTTTATCATTAGCACACACACCAATTGATGATGCAGCAATCATATGCGTCAGTAGGATGCCCTCTCTGAAGGCTATCAACTTAAATAGTACAAACATCAAAGGTATAATTCCTCAGTATGGTACCGAGCCAGAATATCTATCCTTTACTGTTCTACAAGGGCTTAGATGTTTAGAAGTGTTAAATTTGGAGCAGACTCAAGTTAGGGATGCAGCCTTATGTGCTTTATCAAGTCTTCGAGAATTGCGTAATGTCAGTCTTAAAAGTGATTCTCTTACTGACAGCGCCCTTTACTACTTGTCATCTATCCCAAAGCTAGCTAGTCTCGGCATTCGAGATGCAGTAGTGACGAATTCTGGACTTGATTTGCTGAAGCCCCCATCCACCTTAATTAAAATGGATTTGAGGGGCTGTTGGCTCTTGACTGGGGATGTAATATTGGCATTTGGTAGGAGGTTTCCTCAAATCCAAGTGATGCATGAGCTCACTCATCTCTCGCCATCTACTCACACTGGGCACTCAAATAGCACTAGATTTACTTCCAGGATTTCAAAAGTGAAGGAGAAGATCAGAGAAATACAAATGCCACAAAGTTTTATAGATCAAAGATTAAAATATAACAGGGGAGAGTTGCTTGCACTGCAGTACTCCTCTCTATGTCCCATATCGACCGATGCTAGAGCTGCCTTACTGGATGAGATGGAATCGGGATCACATTCGGGCTCCAACGAATTTGTGGACTTCGAGTCAGTGCCTAAGGTAGATGTTCCTTTGTATACGAGGAAGGACCGCCAACCAGGCCCGGCAATATTCAGTTTAGGAATCAAAGCAGAAGACTTGGCTTTCTTGGAGAAAGACGACGGGTTGGCAGCATTGGTATCGATTGGCAAAGGTGGCTGTGGAGAAGTTTACAAAGCTGAATTACCTGGAAGCAATGGGAAAATAATTGTCATAAAGAAGATTGTTCAGCCAAAGGAAGCATCAGAAGTCGCTGATGGAGAGAGCAGGTTAATAATGAACAAGAAAATGCGTCAAATAATGTCTGAAATAAATACCGTGGGACAAATCCGGCATCGAAACCTTCTTTCTCTACTGGCTCATGTCTCACGTCCTGATTGCCATTTCCTTGTCTATGAATTCATGAAAAATGGTAGCTTACATGATATACTGAAAGAGGTATCAGATGGAAAAAGAGAGCTTGAATGGATTGCTAGGCACCGAATTGTGCTTGGAGTGGCGGCAGGGCTCGAATATCTTCACACCAACCTGAATCCGTGCATAATTCATAGAGATTTGAAGCCTGCAAATATCTTACTAGACAATGACATGGAAGCTCGAATTGCAGATTTTGGGCTAGCAAAAATAAAACCTGATGCGCTTACTCATATGACAACATCTAATGTAGCTGGAACCTTTGGTTACATAGCACCTGAATATCATCAGACTCTGCAGCTCACTGACAAATGTGACATCTACAGCTTCGGTGTGGTTCTCGCAGTCTTGGTGATGGGGAAGTTTCCATCGGATGAGTTTTTGAGCAACACGGATGAGGCAACTTTGGTCCAGGGTGTAGGGAAAAAACCAGGCCCGACAATATTCAGTATAGGAATCGAAGCAGACGACTTGGCTTTCTTGGAGAAAGACGACGGGTTGGCAGCAATGGTATCAATTGGCAAAGGTGGCTGTGGAGAAGTTTACAAAGCTGAATTACCAGGAAGCAATCGGAAAATAATTGCCATAAAAAAGATTGTTCAGCCAAAGGAAGCATCAGAAGTCGCTGATGGAGAGAGCAGCGAGGCATTCCTCCATGCTACCGCTGGTGGTGGCCAGGGGAGGGAGGAGCTGAAAGAGGGTGTTGAAGTCATTGCTGGGGAGGTCGGAGAAGAAGGCTGGAGAAGTCTGGTGGGTCGCGGCCAATGGACTCAAACCGTTTGA 3012 43.73 MLSLSLGLSLDDEPRGSPDGSPFATQAHERVRLRWPRKTLILFGTGFEDFDFHGSTSASTSGRAWGIFKCSVEEINFSGDNAVDAEWMAYLGAFSALRSLNLADCHRITNSALWSISGMASLKELDLSRCVKLTDAGIMHLLSIPTLEKLSISETRVSSHGIKLLASLRNLSFLDLGGLPVTDQSLSYLQVLTNLKYLDIWGSKITDQGSIVLQMFTMLSFLNLAWTSVTQLPKLPSLEILNMSNCTINSSQKGFCNKVHLQKLIASGATFVNEDEILGSIEAISLCILDVSNSSLRSFSFLPQMKALQHLDLSSTTIENDSMELLAFLGPSLKTLNLSNTKVNSLGVGILAGEVPNLETLSLAHTPIDDAAIICVSRMPSLKAINLNSTNIKGIIPQYGTEPEYLSFTVLQGLRCLEVLNLEQTQVRDAALCALSSLRELRNVSLKSDSLTDSALYYLSSIPKLASLGIRDAVVTNSGLDLLKPPSTLIKMDLRGCWLLTGDVILAFGRRFPQIQVMHELTHLSPSTHTGHSNSTRFTSRISKVKEKIREIQMPQSFIDQRLKYNRGELLALQYSSLCPISTDARAALLDEMESGSHSGSNEFVDFESVPKVDVPLYTRKDRQPGPAIFSLGIKAEDLAFLEKDDGLAALVSIGKGGCGEVYKAELPGSNGKIIVIKKIVQPKEASEVADGESRLIMNKKMRQIMSEINTVGQIRHRNLLSLLAHVSRPDCHFLVYEFMKNGSLHDILKEVSDGKRELEWIARHRIVLGVAAGLEYLHTNLNPCIIHRDLKPANILLDNDMEARIADFGLAKIKPDALTHMTTSNVAGTFGYIAPEYHQTLQLTDKCDIYSFGVVLAVLVMGKFPSDEFLSNTDEATLVQGVGKKPGPTIFSIGIEADDLAFLEKDDGLAAMVSIGKGGCGEVYKAELPGSNRKIIAIKKIVQPKEASEVADGESSEAFLHATAGGGQGREELKEGVEVIAGEVGEEGWRSLVGRGQWTQTV 1003
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6724606 6739809 - BLOR11500 Blo03g00319 57783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00319 1003 Gene3D Ribonuclease Inhibitor 51 157 IPR032675 -
Blo03g00319 1003 Pfam Leucine Rich repeat 121 141 IPR001611 GO:0005515
Blo03g00319 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Blo03g00319 1003 SUPERFAMILY RNI-like 74 394 - -
Blo03g00319 1003 SMART LRR_CC_2 305 329 IPR006553 -
Blo03g00319 1003 SMART LRR_CC_2 168 192 IPR006553 -
Blo03g00319 1003 SMART LRR_CC_2 94 118 IPR006553 -
Blo03g00319 1003 SMART LRR_CC_2 438 462 IPR006553 -
Blo03g00319 1003 SMART LRR_CC_2 235 254 IPR006553 -
Blo03g00319 1003 SMART LRR_CC_2 119 144 IPR006553 -
Blo03g00319 1003 SMART LRR_CC_2 355 379 IPR006553 -
Blo03g00319 1003 Gene3D Ribonuclease Inhibitor 405 567 IPR032675 -
Blo03g00319 1003 Gene3D Ribonuclease Inhibitor 158 269 IPR032675 -
Blo03g00319 1003 Pfam Protein kinase domain 652 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00319 1003 Gene3D Transferase(Phosphotransferase) domain 1 635 894 - -
Blo03g00319 1003 SUPERFAMILY Protein kinase-like (PK-like) 653 873 IPR011009 -
Blo03g00319 1003 PANTHER RECEPTOR-LIKE PROTEIN 14 67 588 - -
Blo03g00319 1003 ProSiteProfiles Protein kinase domain profile. 648 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00319 1003 PANTHER F-BOX/LRR-REPEAT PROTEIN 13 67 588 - -
Blo03g00319 1003 SUPERFAMILY L domain-like 356 501 - -
Blo03g00319 1003 Gene3D Ribonuclease Inhibitor 274 404 IPR032675 -
Blo03g00319 1003 SMART serkin_6 648 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00319 Blo-Chr3:6724606 Blo18g00338 Blo-Chr18:3513906 0 dispersed
Blo05g00145 Blo-Chr5:1329374 Blo03g00319 Blo-Chr3:6724606 4.94E-21 dispersed
Blo03g00319 Blo-Chr3:6724606 Blo12g00744 Blo-Chr12:25789459 3.19E-44 transposed
Blo03g00319 Blo-Chr3:6724606 Blo07g00483 Blo-Chr7:10921756 1.36E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84177 PF00069 Pkinase 9.20E-41 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00319 - - qsu:112023903 590.497