Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00348 ATGGCAACTAAGGAATCGAGCTCTGGAACTTCAGGAGAAAGCAAAATCAAAGGGGTACTCACTCATGGTGGTAGATACGTGCAGTATAATGTCTATGGTAACTTGTTTGAGGTTTCTGCAAAGTATGTTCCTCCCATTAAGCCCATCGGAAGAGGTGCTTATGGCCTCGTCTGTGCTGCTGTGAATTCAGAAACTCATGAGGAGGTTGCTATAAAGAAAATTGGTAATGCTTTTGACAACAGAATAGATGCTAAAAGAACATTGAGAGAGATTAAGCTTCTTCGCCATATGGAGCACGAAAACATTATTGCCATTCGGGATATCATACGACCGCCAAAAAGAGAGACCTTTAATGATGTGTACATTGTATATGAATTGATGGATACTGATCTTCATCAGATAATTCGTTCCGATCAAATGCTGACTGATGATCATTGTCAGCTGATGATTGAGTTTAAAGATACTTTAATATTAAGAAATAATTATTTTTTATATCAGCTTTTACGGGGTCTGAGATATGTGCACTCGGCCAATGTCTTGCACCGTGATCTAAAGCCAAGCAACCTTCTTCTAAATGCAAATTGTGACCTAAAAATTGGAGATTTTGGATTGGCGAGGACAACGTCTGAAACTGATTTCATGACCGAATATGTGGTCACTCGATGGTACAGAGCTCCAGAATTGCTCCTTAATTGTTCAGAATACACTGCTGCCATTGATGTTTGGTCCGTCGGTTGCATACTTGGCGAAATAATGACTAGAGAACCATTGTTCCCCGGAAAAGATTATGTTCATCAACTCGGACTTATTACTGAGATTATCACTGGACTTGCTCTTTATGTTTTCACCGTCCAAATGCCAAATATCATAGTAGCTTCCATTTTTGACTGGTTGGTCAGAGGTTCACCTGATGACGCCAGCCTTGGATTCCTCCGAAGCAATAATGCTCGAAGATACGTTAAGCAGCTTCCACAATTCCGTAAGCAACAATTTTCGATGAAGTTTCCAAATATGTCTCCCGGGGCCATTGATCTTCTGGAGAAAATGCTTGTCTTTGATCCCAACAGACGCATTACAGTAGAAGAGGCTCTTTGTCATCCGTATTTGTCGTCTCTTCACGATATCAACGACGAACCTGTCTGTCAGAGGCCCTTCAGTTTTGATTTCGAACAGCCGTCGTGCACTGAAGAGCATATTAAAGAATTGATTTGGAGAGAATCTGTGAAGTTCAACCCGGAATTTACGCACTAG 1251 41.09 MATKESSSGTSGESKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPIKPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNRIDAKRTLREIKLLRHMEHENIIAIRDIIRPPKRETFNDVYIVYELMDTDLHQIIRSDQMLTDDHCQLMIEFKDTLILRNNYFLYQLLRGLRYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLGLITEIITGLALYVFTVQMPNIIVASIFDWLVRGSPDDASLGFLRSNNARRYVKQLPQFRKQQFSMKFPNMSPGAIDLLEKMLVFDPNRRITVEEALCHPYLSSLHDINDEPVCQRPFSFDFEQPSCTEEHIKELIWRESVKFNPEFTH 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7708281 7711055 - BLOR11529 Blo03g00348 57812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00348 416 SMART serkin_6 43 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00348 416 SUPERFAMILY Protein kinase-like (PK-like) 46 377 IPR011009 -
Blo03g00348 416 Gene3D Phosphorylase Kinase; domain 1 384 407 - -
Blo03g00348 416 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524
Blo03g00348 416 Gene3D Transferase(Phosphotransferase) domain 1 300 383 - -
Blo03g00348 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 18 414 - -
Blo03g00348 416 Gene3D Phosphorylase Kinase; domain 1 46 126 - -
Blo03g00348 416 Gene3D Transferase(Phosphotransferase) domain 1 127 274 - -
Blo03g00348 416 CDD STKc_TEY_MAPK 36 412 - -
Blo03g00348 416 ProSiteProfiles Protein kinase domain profile. 43 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00348 416 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 414 - -
Blo03g00348 416 Pfam Protein kinase domain 47 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00348 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00348 Blo-Chr3:7708281 Blo18g00803 Blo-Chr18:23452152 2.71E-141 dispersed
Blo03g01107 Blo-Chr3:37536936 Blo03g00348 Blo-Chr3:7708281 0 transposed
Blo06g00804 Blo-Chr6:31316561 Blo03g00348 Blo-Chr3:7708281 0 transposed
Blo11g01011 Blo-Chr11:26209290 Blo03g00348 Blo-Chr3:7708281 0 transposed
Blo16g00587 Blo-Chr16:24102424 Blo03g00348 Blo-Chr3:7708281 1.48E-71 transposed
Blo19g00325 Blo-Chr19:21330978 Blo03g00348 Blo-Chr3:7708281 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84179 PF00069 Pkinase 1.50E-66 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00348 - - csv:101214254 687.182