Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00374 ATGGCGGCTTCTTCTAAGGAGGCGCTGATGCTGAAAGATTATCTGATGGATGATCTGGGTTCTTGCTCTTCCAATGGCTTCGGATCGTTTCCCAGGCGGCAATGCTGCTCCACTGTCCGGCTTCTCCTCGAGATCGATCTGAAGGAGAGAGACTCGGCCGCCTTCTCAGCCGCCAACCCACTTCTCCGGAGAAGCCGTTCTAAGAGATATGCTTTAACTAGTTTATCTGCTTTTCTGAGAACCTCCGAGGCAGTTTTTATCGCCGTTAAGAACCTCTCATTTCCTTCCGGCAAGTCCTCTTCTTCTTCCTCAAAGAGTCAAGCTCGCAGAGAACATTGCCGCCATAGAAGCCGTTCGTTTAAGCTTTTAAGCAAGAGCTTCTGGAAGAAATTACCTGATCAGGTGCAGCCTGAGATCAGAATGGGGAAATCCTTCCGTGTTCTCCACGAGAAAGACGAGAAATCGTTGGATATAAATCCTTTGACCTCCATCAACGCCAACTCCACAGCTCTGATCTGCAACAGGGTGTCAACCAATACAGTCTGTTCCAGCACCAGTCGGTCGGAAAGCGAATTCAAATTGGCAAACACGGTCTCCCCGGACAGCATTTCAGCGAGTTGGACTGAAACCGACGCCGTCGATAGTGAACAACAAAGTCCATCGGAGGCGGTCAGGAGAAGGGTAGGGGTAAGCCCCCCTCCCTACCCTGAACAAAGCACCAAGGAATGGTCAAGGAAAGAAGAGAAAGAGCAGTTCAGTCCAGTGTCTGTGCTGGATTGTCCCTTTCAAGACGAAGAAGAAGCCTCCTCTCCTTCACAATGCACCTTCCAAGGAGCAAAACAACAGATCATGCAGAAGATCAGGCGGTTTGAGGACCTTGCTCAGCTGGAACCACTGGATTTACAGCAGCGTTTTGTAATATCGGAGCTTGAAGAAGAAGCTCAACTCTTCACTCAACCCTTGATCATAAACAAAGAAGCCCAGACAGACCATAAAGCGATCCAACTTCTCAACCTAATTGAGGCTAAAAACGGGTCGAACAGCCTTGCTTCTCTATCGGAAAATCTATTACTTGACTTCTTTCTGGAAAAAATAGAGGAAACTACGAGCAATCTATCCGAGTTTCCGGAGATTCTGAAGGTGGCTGAAGATTGGTTAAATGGATTGAGCGAAGAGGGATGGCGGGGTTGGGAGGTGGAAGAAGGAAGAGCAGCGTATGGGAGAGAAATGGAGAAGGGAGGAAGGTGGAGAAATATGGAGGAAGAAAAGGAAGAAGAAGGTCTGGAAATGGAGGATGAAGTCTGTTTAATTTGGGAAATGAAGAACCAGGATCAAGCCAGATCGCTGTTTGGGATTTCTATCTCTGATCGACCTAAATGGCAACAGTTCCTAATTTGTTCTTCTGGGTTCTTCTTTGGGTACCTCGTCAATGGCGTTTGCGAGGAATACGTGTATAATCGGCTCCAATTCAGCTATGGATGGTATTTCACCTTTGTGCAAGGAATGGTTTATCTAATACTGATTTACTGCCAAGGTTTCACCACAAAGCAAATGGTGAATCCGTGGAAAGCATATGTAAAACTCTCAGCTGTTCTAATGGGTTCCCACGGATTAACCAAAGGGTCTCTAGCTTTTCTCAATTATCCGGCTCAGATCATGTTTAAATCCACCAAGGTATTGCCTGTTATGGTGATGGGGGCATTCATTCCTGGATTGAGGAGGAAATATCCTCTTCATGAATACATCTCTGCAATATTTCTAGTCATTGGCTTGATCCTCTTCACCTTAGCAGATGCAAAAACCTCTCCTAATTTCAATATTTTCGGTGTTATAATGATTAGTGGTGCACTAATCATGGATTCCTTTCTTGGTAATCTACAAGAAGCGATTTTCACGATGAATCCCGAGACAACTCAGACAGAGATGCTGTTTTGCTCAACAATGGTGGGGTTGCCTCTCTTAGTTGTCCCAATGGTTTTAACAGGAGAGCTGTTCAGAGCTTGGAACTCTTGCTCAGAACATCCTTATGTCTATGGAGTGTTAGTGTTTGAAGCCATGGCAACTTATGTTGGTCAAGTCTCTGTTCTATCCCTCATCGCCATTTTCGGAGCTGCTACTACTGCCATGATAACGACGGCGAGGAAGGCGGTAACTTTGTTGCTTTCATACATGATATTTACGAAGCCATTGACGGAGCAACACGGGACAGGGTTGCTACTGATAGCCATGGGAATCGTGATGAAGATGCTGCCGCAGGAAAACAAACAGCTCCGGCCCCTTGCCATGGTCAAGCGTGGAAAGCACGGAAAGGAAGTAGATACGGACAAAGTGGGGAGTGAAGATGCAGAAGAAGAGGAAAAGAGGCCTCTGGTTTAA 2376 46.42 MAASSKEALMLKDYLMDDLGSCSSNGFGSFPRRQCCSTVRLLLEIDLKERDSAAFSAANPLLRRSRSKRYALTSLSAFLRTSEAVFIAVKNLSFPSGKSSSSSSKSQARREHCRHRSRSFKLLSKSFWKKLPDQVQPEIRMGKSFRVLHEKDEKSLDINPLTSINANSTALICNRVSTNTVCSSTSRSESEFKLANTVSPDSISASWTETDAVDSEQQSPSEAVRRRVGVSPPPYPEQSTKEWSRKEEKEQFSPVSVLDCPFQDEEEASSPSQCTFQGAKQQIMQKIRRFEDLAQLEPLDLQQRFVISELEEEAQLFTQPLIINKEAQTDHKAIQLLNLIEAKNGSNSLASLSENLLLDFFLEKIEETTSNLSEFPEILKVAEDWLNGLSEEGWRGWEVEEGRAAYGREMEKGGRWRNMEEEKEEEGLEMEDEVCLIWEMKNQDQARSLFGISISDRPKWQQFLICSSGFFFGYLVNGVCEEYVYNRLQFSYGWYFTFVQGMVYLILIYCQGFTTKQMVNPWKAYVKLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMVMGAFIPGLRRKYPLHEYISAIFLVIGLILFTLADAKTSPNFNIFGVIMISGALIMDSFLGNLQEAIFTMNPETTQTEMLFCSTMVGLPLLVVPMVLTGELFRAWNSCSEHPYVYGVLVFEAMATYVGQVSVLSLIAIFGAATTAMITTARKAVTLLLSYMIFTKPLTEQHGTGLLLIAMGIVMKMLPQENKQLRPLAMVKRGKHGKEVDTDKVGSEDAEEEEKRPLV 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8597094 8605678 + BLOR11555 Blo03g00374 57838

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00374 791 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 440 762 IPR013657 GO:0055085
Blo03g00374 791 MobiDBLite consensus disorder prediction 765 791 - -
Blo03g00374 791 MobiDBLite consensus disorder prediction 95 117 - -
Blo03g00374 791 Pfam UAA transporter family 462 750 IPR013657 GO:0055085
Blo03g00374 791 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 2-LIKE 440 762 - -
Blo03g00374 791 MobiDBLite consensus disorder prediction 205 250 - -
Blo03g00374 791 MobiDBLite consensus disorder prediction 205 224 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00374 K15277 SLC35B3, PAPST2; solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 - pvy:116142876 591.652
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00380 Blo-Chr2:4311791 Blo03g00374 Blo-Chr3:8597094 0 dispersed
Blo02g00381 Blo-Chr2:4358166 Blo03g00374 Blo-Chr3:8597094 0 dispersed
Blo03g00374 Blo-Chr3:8597094 Blo14g00134 Blo-Chr14:959742 1.69E-12 dispersed
Blo07g01352 Blo-Chr7:33655161 Blo03g00374 Blo-Chr3:8597094 1.68E-07 dispersed
Blo03g00374 Blo-Chr3:8597094 Blo16g01127 Blo-Chr16:39798129 4.07E-14 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g404 . . . . . . . Bma14g00581 . . Cma02g01487 Cma15g01196 Car02g01245 Car15g01084 . . Cpe05g00304 . . . . . . . . . . . . . . Cone8ag0331 Cone12ag0328 . . . Csa05g00326 Chy09g01183 . Blo03g00374 . Bda07g00498 . . Bpe11g00687 . . . Cmo02g01525 Cmo15g01260 . . . . . Cpe13g00178 Bhi12g00201 . . . . . Lcy12g1705 Cla01g00303 Cam01g0315 . Cco01g0322 Clacu01g0315 Cmu01g0300 Cre09g2208 Lsi09g00311 . . Cme09g01716
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008294 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00374 Blo_Chr03 FPKM 12.278409 17.926094 13.446446 12.21631 11.291448 15.190957 12.071739 18.823915 24.48686 27.532278