Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo03g00383 | ATGGACGGCAGTTCTCTTCCATTTCCTTTCCACACCAGAGACTTCCATCAGGAGCAGCATCAATTTCAAAACTCGGAGGATGAACAAACTGGAAGCAGCGGACTGAACAACCGAACCCAGATCAAGCAAGATCGAGACGGAAACATAGAAAACTCCGGCGCCGGAGAAAGCAACAAGGACCTCGTCGCAGGCGCTGGAGAAGGTGAGATGTCTAGAAGGCCACGAGGCCGACCAGCGGGATCAAAAAACAAACCGAAACCTCCTATTATCATCACACGCGACAGCGCCAACGCCCTCCGGACCCACGTCATCGAGGTCACCGACGGATGTGACGTGGTGGAGAGCGTGGCCACCTTCGCCCGCCGCCGCCAGCGGGGGATCTGCATCATGAGTGGCACCGGTTCCGTCATGAACGTGGCGATCAGACAACCATCATCCCCCGGTGCAATCGTCAACTTACACGGCCGATTTGAAATCTTATCTCTAGCAGGATCTTTTCTTCCTCCTCCTGCACCACCGGCGGCTACAAGCTTGGCGATTTACCTAGCCGGAGGTCAAGGACAAGTGATTGGGGGGAGCGTTGTTGGAACCCTTATCGCCTCTGGTCCGGTTGTAATAATGGCCGCTTCTTTTAGCAACGCCGCTTACGAGAGGCTTCCCCTGGACGAAGATGAGCCACCGCTGCCGATGCCAGGCGCCGGTTTGGGGTCACCTGGTGAAGTTAGCGATCAACAACAACAGCAGCAACAGCAACTTTTAGCAGATTCAAATGTTGCTAATTTATTTCATGGGTTGCCTCCAAATCTTCTCAACTCTATCCAGTTGCCGAATGAAGGGTATTGGGCTACCGGCCGACCACCTTACTGA | 867 | 54.21 | MDGSSLPFPFHTRDFHQEQHQFQNSEDEQTGSSGLNNRTQIKQDRDGNIENSGAGESNKDLVAGAGEGEMSRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDVVESVATFARRRQRGICIMSGTGSVMNVAIRQPSSPGAIVNLHGRFEILSLAGSFLPPPAPPAATSLAIYLAGGQGQVIGGSVVGTLIASGPVVIMAASFSNAAYERLPLDEDEPPLPMPGAGLGSPGEVSDQQQQQQQQLLADSNVANLFHGLPPNLLNSIQLPNEGYWATGRPPY | 288 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 9086916 | 9087782 | - | BLOR11564 | Blo03g00383 | 57847 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo03g00383 | 288 | MobiDBLite | consensus disorder prediction | 24 | 55 | - | - | |
| Blo03g00383 | 288 | CDD | DUF296 | 100 | 211 | IPR005175 | - | |
| Blo03g00383 | 288 | ProSiteProfiles | PPC domain profile profile. | 96 | 232 | IPR005175 | - | |
| Blo03g00383 | 288 | MobiDBLite | consensus disorder prediction | 1 | 90 | - | - | |
| Blo03g00383 | 288 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED | 4 | 288 | - | - | |
| Blo03g00383 | 288 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 96 | 230 | - | - | |
| Blo03g00383 | 288 | Gene3D | - | 99 | 226 | - | - | |
| Blo03g00383 | 288 | MobiDBLite | consensus disorder prediction | 221 | 250 | - | - | |
| Blo03g00383 | 288 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 100 | 213 | IPR005175 | - | |
| Blo03g00383 | 288 | PIRSF | ESCAROLA | 10 | 288 | IPR014476 | GO:0003680 | |
| Blo03g00383 | 288 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 4 | 288 | IPR014476 | GO:0003680 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g01651 | Blo-Chr1:56304124 | Blo03g00383 | Blo-Chr3:9086916 | 3.04E-58 | dispersed | |
| Blo03g00383 | Blo-Chr3:9086916 | Blo15g00064 | Blo-Chr15:531149 | 9.01E-71 | dispersed | |
| Blo13g00459 | Blo-Chr13:25073801 | Blo03g00383 | Blo-Chr3:9086916 | 4.36E-67 | dispersed | |
| Blo18g00103 | Blo-Chr18:928542 | Blo03g00383 | Blo-Chr3:9086916 | 1.23E-52 | dispersed | |
| Blo19g00177 | Blo-Chr19:7583163 | Blo03g00383 | Blo-Chr3:9086916 | 1.79E-80 | dispersed | |
| Blo02g00288 | Blo-Chr2:2794691 | Blo03g00383 | Blo-Chr3:9086916 | 1.71E-117 | transposed | |
| Blo03g00206 | Blo-Chr3:4807881 | Blo03g00383 | Blo-Chr3:9086916 | 1.89E-135 | transposed | |
| Blo12g00314 | Blo-Chr12:18512274 | Blo03g00383 | Blo-Chr3:9086916 | 4.01E-82 | transposed | |
| Blo19g00297 | Blo-Chr19:18628750 | Blo03g00383 | Blo-Chr3:9086916 | 3.17E-176 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo03g00383 | - | - | vvi:100265031 | 402.134 |