Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00396 ATGAGCCATAACCCGCTCAGTTCGATTCAGCTGGGTAATCTAAGCACTCAACTGACGAAGAGTTCGAAATTACCACCAGGCCCTCATGGAGTTCCCTTGCTCGGAAACCTCCCTTTTCTTGACCCGGAGCTTCACACCTACTTCGCCGATCTGGCTCGAGTCTACGGTCCGATCATCAAGCTCCAGCTTGGCAACAAGTTGGGCATAATTATAAGCACCCCAGCCATGGCTCGTGAGGTTCTTAAGGATCAGGACTTGACCTTTGCCAACCGCGACGTTCCGACAGTGGCTCTCACATCAGCCTACGGCGGCTTAGATATCGTGTGGACACCATACGGGCTGGAGTGGAGAATGTTGAGGAAGGTCTGCGTTTTTAAAATGCTCAGTAACACGACGTTAGACTCAGTCTATGAATTCCGGCGAAGGGAGATCCGAAACTTAGTGGGTTACTTTTACGGCCTGGCCGGATCCCAAGTGAACCTCGGCGAGCAGACGTTTTTAACCATTCTGAACTTCATTACCAATATGATCTGGGGTGGTACAGTGAGTGGGGAAGAGAGAGCCACCATCGGAGCCGAGTTTAGAAAGATTGTTTCGGAAATGACCGAATTAATGGGGAAACCTAACATTTCTGACTTCTATCCTGGACTGTCTCGGTTTGATCTGCAGGGTATGACGAAGAAAATGAAAGCACTAGTTAAAAGGTTTGACAAGATCTTTGAAACTATGGTAGATCAACGGCGGAGGATTGAGAGAGTTGGTGGGGAAGATGAGAAACAGAATAATGATTTCCTGCAATTTTTATTGAAGTTTATGGAGGAAGGTGATTCCAAGATACCTTTCACAATGACTCATGTCAAAGCCCTACTTGTATTCGAAAATAGTGAGAAAGAAGCAAAAATAGTTGTGAAAAGATTTGAGTTAACTGGTAGAAAAGGCATAACTTTTGCTACGGATGTCGGAATTCAGCGCAGAAGGTATCAAATCGAAGCTCTCTCAGAGCTCTATAATCATCATAAGGACATGGTGGTGGGAGGGACAGATACGTCGTCGAATACGATAGAGTTAGCAATGGCAGAAATCATGAACAGTCCAGAGGTGATGAAGAAGGTTCAACAAGAGCTAGATATAGTTATAGGAAAAGAAGCCATTGTTGAAGAATCGGACATTCATAAGCTTCCATACTTACAGGTCTGCATGAAAGAATCTCTTCGTCTACACCCATCCCTTCCTCTTTTAGTTCCTCACTGTCCGAGTGCAACCTGCACTGTTGGAGGCTACGAAATCCCCAAAGGCTCCAGGGTTTTCATTAACGTGTGGGCCTTCCAGAGGGACCCATTAAATTGGGATAAGCCATTGGAGTTCAACCCAGAAAGGTTTTTGAACAGTGAGTGGGATTATAGTGGAAATGACTTTCATTATTTTCCATTTGGATCTGGAAGAAGAATATGTGCAGGTATTGCAATGGCAGAAAGGAGTGTGATACATTTTCTCGCCACTTTTTTTCATTCTTTTGATTGGAAACTTCTTCCCGGGCAGAAAATGGATCTAACAGAAAAATTTGGAATCGTGTTGAAGAAGAAGACTCCTCTCCTTGCAATCCCAACACCTAGACTATCAGATCGTGCTTTATATCAGGAAACCAACGCTATGTTTATGATTGGTAAAACCCGTTATTTTTATGAATAA 1689 44.11 MSHNPLSSIQLGNLSTQLTKSSKLPPGPHGVPLLGNLPFLDPELHTYFADLARVYGPIIKLQLGNKLGIIISTPAMAREVLKDQDLTFANRDVPTVALTSAYGGLDIVWTPYGLEWRMLRKVCVFKMLSNTTLDSVYEFRRREIRNLVGYFYGLAGSQVNLGEQTFLTILNFITNMIWGGTVSGEERATIGAEFRKIVSEMTELMGKPNISDFYPGLSRFDLQGMTKKMKALVKRFDKIFETMVDQRRRIERVGGEDEKQNNDFLQFLLKFMEEGDSKIPFTMTHVKALLVFENSEKEAKIVVKRFELTGRKGITFATDVGIQRRRYQIEALSELYNHHKDMVVGGTDTSSNTIELAMAEIMNSPEVMKKVQQELDIVIGKEAIVEESDIHKLPYLQVCMKESLRLHPSLPLLVPHCPSATCTVGGYEIPKGSRVFINVWAFQRDPLNWDKPLEFNPERFLNSEWDYSGNDFHYFPFGSGRRICAGIAMAERSVIHFLATFFHSFDWKLLPGQKMDLTEKFGIVLKKKTPLLAIPTPRLSDRALYQETNAMFMIGKTRYFYE 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10301325 10309137 - BLOR11577 Blo03g00396 57860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00396 562 PANTHER OS08G0547900 PROTEIN 340 546 - -
Blo03g00396 562 PANTHER OS08G0547900 PROTEIN 16 291 - -
Blo03g00396 562 Pfam Cytochrome P450 25 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 Pfam Cytochrome P450 334 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS E-class P450 group I signature 52 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS E-class P450 group I signature 76 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 340 546 - -
Blo03g00396 562 SUPERFAMILY Cytochrome P450 25 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 16 291 - -
Blo03g00396 562 Gene3D Cytochrome P450 11 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00396 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00396 Blo-Chr3:10301325 Blo03g00406 Blo-Chr3:11207999 0 dispersed
Blo03g00396 Blo-Chr3:10301325 Blo03g00397 Blo-Chr3:10358670 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00396 - - qsu:111991580 690.263