Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00441 ATGCTCTCCAAAAGACCAAGAAACGCAAGAGTTGCCTTAATAGAACACCAAAAGACTGCTCGTGTTTTCCTTCTACAAAATCTTCCATCTAATATGTTTATAAATGTTACAGGGAAAGGAGGTGCTTGGCTGATTAGAGTTTCAGGTTTTGAAATTGGCGCTATGTATATTGAGGAAATGAAGAGAGGGGTGGTGGAGAGTGGAGGAGAGGGAAATTCAAACGTTGGAGATTGTAAATTTGTGACCCAGAGCGTTGATGTTTCAGAGACGAAAAGAGTTTTGATTGGAGCTGGAGCTCGCGCTCTCTTCTACCCAACTCTACTTTACAATGTTCTTAGGAATAAACTTCAGAGTGAATTCCGGTGGTGGGATAGGGTTGATCAGTTTATACTGCTAGGTGCTGTTCCATTTCCCACTGACATACCCTGCTTGAAGGAGCAAGGTGTTGGGGGGGTCATCACACTAAATGAGCCGTATGAGACTTTGGTTCCAACAACCTTATATCAGGCTCATGGCATAGATCATCTGGTTATTCCTACCAGAGACTATTACTTTGCACCTTCATTAAGTAACATCATTCAGGCTGTGGATTTCATTCATGAAAACTCATTGCGTGGTCGAAGTACCTATGTTCACTGTAAAGCGGGAAGAGGACGCAGCACTACTATAGTGATCTGCTACCTGGTGCACTATATGCAGATGACACCAAATGATGCGTATAGTTATGTCAGATCAATTAGGCCAAGAGTGCTTTTAGCAACTTCCCAGTGGCAGGCTGTCCAGGAATTCTACTATCTTAATGTCAAGAGGACAGTCGTCTACAGTCATCTGACAAATCTCCTAACGAAAGTGCCAATGTCATTAGTGGCAAAAGATGTTGCATTTGATGATGGGTCTGTTGTTTTAGTAACAAAATCTGATCTCAATGGTTATGAGGAGAGTCTCGAGTCAAGGTCAGAGCAAAGTGAGATATGGGCAGATATAGGTGTTGTTTATCGGGTTCGAATTGTTGGTCAGGCTGCCATGGCCAGGATATCTTGTCTCTGGGTCCGATGCCGCACTCACCACCAGAAAAGCAAACTCATTGACGACAGTGGCTGCACAATCAGGGCTGCTCATCTCGAAGGCATAAGTATGGATATCCATGTTTACTGA 1155 43.55 MLSKRPRNARVALIEHQKTARVFLLQNLPSNMFINVTGKGGAWLIRVSGFEIGAMYIEEMKRGVVESGGEGNSNVGDCKFVTQSVDVSETKRVLIGAGARALFYPTLLYNVLRNKLQSEFRWWDRVDQFILLGAVPFPTDIPCLKEQGVGGVITLNEPYETLVPTTLYQAHGIDHLVIPTRDYYFAPSLSNIIQAVDFIHENSLRGRSTYVHCKAGRGRSTTIVICYLVHYMQMTPNDAYSYVRSIRPRVLLATSQWQAVQEFYYLNVKRTVVYSHLTNLLTKVPMSLVAKDVAFDDGSVVLVTKSDLNGYEESLESRSEQSEIWADIGVVYRVRIVGQAAMARISCLWVRCRTHHQKSKLIDDSGCTIRAAHLEGISMDIHVY 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13693147 13697477 - BLOR11622 Blo03g00441 57905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00441 384 ProSitePatterns Tyrosine specific protein phosphatases active site. 211 221 IPR016130 GO:0016311|GO:0016791
Blo03g00441 384 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 190 258 IPR000387 GO:0016311|GO:0016791
Blo03g00441 384 SMART ptp_7 164 275 IPR003595 -
Blo03g00441 384 PANTHER - 55 384 - -
Blo03g00441 384 CDD PTPMT1 122 264 IPR044596 GO:0004721
Blo03g00441 384 ProSiteProfiles Dual specificity protein phosphatase domain profile. 122 269 IPR020422 GO:0006470|GO:0008138
Blo03g00441 384 Gene3D Protein tyrosine phosphatase superfamily 122 270 IPR029021 -
Blo03g00441 384 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 55 384 - -
Blo03g00441 384 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 117 266 IPR029021 -
Blo03g00441 384 Pfam Dual specificity phosphatase, catalytic domain 143 263 IPR000340 GO:0008138|GO:0016311
Blo03g00441 384 SMART dsp_5 125 266 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00533 Blo-Chr1:5871123 Blo03g00441 Blo-Chr3:13693147 8.21E-98 dispersed
Blo03g00441 Blo-Chr3:13693147 Blo04g00191 Blo-Chr4:1531814 2.19E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00441 - - jre:109005236 460.685