Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g00464 | ATGGCTGAATCAGAGGACGAGTCTGGAGGCGGACAGGCCACCGGGAGGAGTACGAACAGAGGGCTGTCGTTGCGGGAGCAGGACCGCTTGTTGCCGATAGCGAACGTGGGAAGGATCATGAAGAAGGCGTTACCGGCGAACGGGAAGATCTCGAAGGAGGCGAAGGAGACGGTCCAAGAGTGTGTGTCGGAGTTCATCAGCTTCATCACCGGAGAGGCATCAGAAAAGTGTCAGAGAGAGAAGCGAAAGACGATAAACGGAGACGACCTGCTCTGGGCGATGACGACGTTAGGGTTCGAGGACTACGTCGAACCTCTGAAGATTTACTTGCAGCAGTTTAGAGAGCTGGAAGGTGAAAAGTGCGTGGGGGCGCGTGGAAGAGAAGGCGGTGGGGAGGAAGGGAGTGGGTTCGCGGGTGGAACAGGGACGGGGATGATGATGATGATGATGGGTCAGCACCAGCCGGAGGATCGTCAAGGACACCTGTATGGTTCTTCAGGAGCACGCACTGGCTACTGCGGGCGTGGGCCAGCTTACTCTAGCCGCGTGTCTAACAGTGGAAGGCCATCATAG | 573 | 57.24 | MAESEDESGGGQATGRSTNRGLSLREQDRLLPIANVGRIMKKALPANGKISKEAKETVQECVSEFISFITGEASEKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQQFRELEGEKCVGARGREGGGEEGSGFAGGTGTGMMMMMMGQHQPEDRQGHLYGSSGARTGYCGRGPAYSSRVSNSGRPS | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 15511121 | 15511693 | - | BLOR11645 | Blo03g00464 | 57928 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g00464 | 190 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 61 | 77 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Blo03g00464 | 190 | PRINTS | CCAAT-binding transcription factor subunit A signature | 96 | 114 | - | - | |
Blo03g00464 | 190 | PRINTS | CCAAT-binding transcription factor subunit A signature | 58 | 76 | - | - | |
Blo03g00464 | 190 | PRINTS | CCAAT-binding transcription factor subunit A signature | 77 | 95 | - | - | |
Blo03g00464 | 190 | Gene3D | Histone, subunit A | 21 | 156 | IPR009072 | GO:0046982 | |
Blo03g00464 | 190 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 | 1 | 163 | - | - | |
Blo03g00464 | 190 | SUPERFAMILY | Histone-fold | 27 | 120 | IPR009072 | GO:0046982 | |
Blo03g00464 | 190 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Blo03g00464 | 190 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 30 | 94 | IPR003958 | - | |
Blo03g00464 | 190 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 163 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Blo03g00464 | 190 | MobiDBLite | consensus disorder prediction | 124 | 190 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00464 | Blo-Chr3:15511121 | Blo10g00864 | Blo-Chr10:27339437 | 4.12E-78 | dispersed | |
Blo03g00464 | Blo-Chr3:15511121 | Blo02g00141 | Blo-Chr2:1233511 | 2.18E-67 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12113 | PF00808 | CBFD_NFYB_HMF | 1.60E-27 | CL0012 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g00464 | K08065 | - | mnt:21401200 | 211.846 |