Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00464 ATGGCTGAATCAGAGGACGAGTCTGGAGGCGGACAGGCCACCGGGAGGAGTACGAACAGAGGGCTGTCGTTGCGGGAGCAGGACCGCTTGTTGCCGATAGCGAACGTGGGAAGGATCATGAAGAAGGCGTTACCGGCGAACGGGAAGATCTCGAAGGAGGCGAAGGAGACGGTCCAAGAGTGTGTGTCGGAGTTCATCAGCTTCATCACCGGAGAGGCATCAGAAAAGTGTCAGAGAGAGAAGCGAAAGACGATAAACGGAGACGACCTGCTCTGGGCGATGACGACGTTAGGGTTCGAGGACTACGTCGAACCTCTGAAGATTTACTTGCAGCAGTTTAGAGAGCTGGAAGGTGAAAAGTGCGTGGGGGCGCGTGGAAGAGAAGGCGGTGGGGAGGAAGGGAGTGGGTTCGCGGGTGGAACAGGGACGGGGATGATGATGATGATGATGGGTCAGCACCAGCCGGAGGATCGTCAAGGACACCTGTATGGTTCTTCAGGAGCACGCACTGGCTACTGCGGGCGTGGGCCAGCTTACTCTAGCCGCGTGTCTAACAGTGGAAGGCCATCATAG 573 57.24 MAESEDESGGGQATGRSTNRGLSLREQDRLLPIANVGRIMKKALPANGKISKEAKETVQECVSEFISFITGEASEKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQQFRELEGEKCVGARGREGGGEEGSGFAGGTGTGMMMMMMGQHQPEDRQGHLYGSSGARTGYCGRGPAYSSRVSNSGRPS 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15511121 15511693 - BLOR11645 Blo03g00464 57928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00464 190 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Blo03g00464 190 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Blo03g00464 190 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Blo03g00464 190 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Blo03g00464 190 Gene3D Histone, subunit A 21 156 IPR009072 GO:0046982
Blo03g00464 190 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 163 - -
Blo03g00464 190 SUPERFAMILY Histone-fold 27 120 IPR009072 GO:0046982
Blo03g00464 190 MobiDBLite consensus disorder prediction 1 26 - -
Blo03g00464 190 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Blo03g00464 190 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 163 IPR027113 GO:0001228|GO:0006355|GO:0016602
Blo03g00464 190 MobiDBLite consensus disorder prediction 124 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00464 Blo-Chr3:15511121 Blo10g00864 Blo-Chr10:27339437 4.12E-78 dispersed
Blo03g00464 Blo-Chr3:15511121 Blo02g00141 Blo-Chr2:1233511 2.18E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12113 PF00808 CBFD_NFYB_HMF 1.60E-27 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00464 K08065 - mnt:21401200 211.846