Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00473 ATGGGTTCTTCTGGTCGTGGGCACTCCAAATTCACACCAAAGAGTCTCAGGCGTTTAGGTTTGGATTTTCCTTGGTGGACTACTGGTTCAGAGTCAGCTACGTTTACAATAGTAAACAGATGTTCATACACAGTTTGGCCAGCAACCATAACTGGATCAGGAACCGCGGTAGCTACAACTGGCTTTAATCTCTCATCTGGCGACCAACATTCCATCGACATTTCCCCTCCCTGGTCCGGCAGAATATGGGGTCGAACGCAGTGCTCCACCAACTCTGGCACCTTCTCCTGCGCCACCGCTGACTGCGGCACCGGCCAAATCACCTGCAACGGTCAAGGAGCATCTCCACCTGCCTCTCTCATCGAGTTCACCTTAGCAACCGGCGGTGGCCTAGATTTCTATGATGTCAGCCTCGTTGACGGCTTCAACTTGCCACTCTCGGTGGCTCCTCAAGGAGGCTCCGGCGAATGCGCTCAGACGAGTTGTCCAGCGGACGTGAACGCAGTTTGTCCTGCGGATCTAGCCTTAAAGGGAACGGATGGAAATGTGATAGCTTGCAAAAGTGCTTGTATGGTTTTCAACACTCCGCAATACTGCTGCTCCGGGGACTTAGCGTCGCCGGATAAATGCGGTCCGACAGACTATTCGAAGATTTTCAAGGCCCAATGTCCTCAAGCTTATAGCTATGCTTTTGATGATAAGACAAGCACCTTCACTTGCAGTGGAGCAAACTACGTCGTCACTTTCTGTCCATGA 756 51.59 MGSSGRGHSKFTPKSLRRLGLDFPWWTTGSESATFTIVNRCSYTVWPATITGSGTAVATTGFNLSSGDQHSIDISPPWSGRIWGRTQCSTNSGTFSCATADCGTGQITCNGQGASPPASLIEFTLATGGGLDFYDVSLVDGFNLPLSVAPQGGSGECAQTSCPADVNAVCPADLALKGTDGNVIACKSACMVFNTPQYCCSGDLASPDKCGPTDYSKIFKAQCPQAYSYAFDDKTSTFTCSGANYVVTFCP 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15956271 15958698 + BLOR11654 Blo03g00473 57937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00473 251 Pfam Thaumatin family 39 251 IPR001938 -
Blo03g00473 251 PANTHER OS03G0233200 PROTEIN 28 251 IPR001938 -
Blo03g00473 251 CDD TLP-PA 34 250 - -
Blo03g00473 251 PRINTS Pathogenesis-related protein signature 60 69 IPR001938 -
Blo03g00473 251 PRINTS Pathogenesis-related protein signature 81 92 IPR001938 -
Blo03g00473 251 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Blo03g00473 251 PRINTS Pathogenesis-related protein signature 34 46 IPR001938 -
Blo03g00473 251 PRINTS Pathogenesis-related protein signature 132 148 IPR001938 -
Blo03g00473 251 SUPERFAMILY Osmotin, thaumatin-like protein 33 251 IPR037176 -
Blo03g00473 251 SMART tha2 35 251 IPR001938 -
Blo03g00473 251 ProSiteProfiles Thaumatin family profile. 32 251 IPR001938 -
Blo03g00473 251 Gene3D Thaumatin 33 251 IPR037176 -
Blo03g00473 251 PANTHER THAUMATIN-LIKE PROTEIN 1B 28 251 - -
Blo03g00473 251 PIRSF PR5 15 251 IPR001938 -
Blo03g00473 251 ProSitePatterns Thaumatin family signature. 93 109 IPR017949 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00473 Blo-Chr3:15956271 Blo05g00709 Blo-Chr5:24415784 8.43E-85 dispersed
Blo03g00473 Blo-Chr3:15956271 Blo12g00882 Blo-Chr12:27019113 1.02E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00473 - - vvi:100265945 340.117