Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00494 ATGCCGCATGAGAGCTATTCCGGCTCCATTTTCACGTCACCTGGGAAGAACTTGAGAGGGCTCAAAGCTTTAGTTTGTAACAACAACGAGGCTTTCTTTACCGACGAGATTATCAACGACGATGAGTTGGCTCAGAGGAAAGCTGAAGAAGCAGCTTCAAGAAGGAGCCAAGCAGCTGAATGGCTGCGTCGGATGGACCATGGAGCATCAGAATCGCTCTCCAAAGAGCCGTCGGAAGAAGGATTCTGCCTCGCGCTTCGGAACGGTCTAATTCTTTGCAATGTTCTCAATAAAGTCAATCCCGGAGCAGTCTACAAGGTGGTGGAAAATCCAGTGATAGCCGTTCAGTCAACAGAAGGAGCGGCTCAATCTGCCATTCAGTATTTTGAGAACATGAAGAACTTCTTGGATGCTGTTAAGGACATGAAGCTCTTGACATTTGAAGCATCTGATTTGGAAAAGGGAGGTTCTTCGAATAAAGTGGTGGACTGCATTCTCTGCCTAAAAGGGTATTATGAGTGGAAGCAAGCAGGCGGCATTGGGGTTTGGAGGTATGGAGGGACGGTCAGGATCGTGTCCTTCCCGAAGGACGCTCCTTCGTCCTTGATTGGAAGTGAAAGTGCCGATGAATCCGAATCATCACGATATGAGCAGCTTTTAGAGTTTCTCAATTATTCCAATGAGGTTTCGGAAGAAGAATCGAGAATTGCGAACACTATGGCCTTTCTTTTCGATCATTTTGGACTTAGACTTCTGCAGGCTTACCTCCAAGAGAGTAATGGATATGAAGACTTGCCTCTGAGTACAATGACGATCGATATGTTGTTGAGTAAGGTTGTCAAGGATTTATCTGCCCTGCTGGTTTCTCAAGGGACTCAGCTTGGACTTTTTCTGAAGAGAATATTGAAAAATGATGCTGGATTTCTGTCGAAATCTGAATTTATGGAAATCATTGGCCAATATATTGCGAACAGAAGGAGCCTCGTATCGAACGATTTCTCTAAATTCTGTGTGTGCGGAGGTAAACTTGAGGTTGTTCAGAAAAAAGATAGTGTTTCAGATGGGTATGGAGAATTGATGGACATTCAGCAGAGACAGCTCCAGATGTTGAAATCGTCATTTCAAGGCACAAAACTAGAAATCAAGCAGATTCACGCGAGTTGGGAGGAAGAACTAAGAAGGCTGGTTCACCATCTCAAATCGCTCGAACAAACTTCCTCCTCCTATCAGAGAGTCCTTGAAGAAAATCGGCAGCTTTACAATCAAGTCCAAGATCTTAAAGGTACCATCAGGGTCTATTGCAGAGTGAGGCCATTTTTACCAGAGCAATCAAATGTGCAGTCTACTGTGGACTATATTGGAGAAAATGGAAATATTATGATCGTAAATCCACTGAAGCAGGCCAAAGACGCAAGAAGAGTGTTTTGCTTCAATAAAGTATTTGGAACAAATGTCACACAAGAGCAAATATACGATGACACTCAATCGTTGATTAGATCTATATTGGATGGATTTAATGTATGCATATTTGCATATGGACAAACTGGCTCAGGGAAGACTTATACAATGAGTGGCCCTGATCTTATGACCGAACAAACATGGGGCGTGAACTATCGAGCTCTACGTGACTTATTTGAGATATCCAAAACAAGGGTCAACATGATAAAATATGAAGTTGGCGTTCAAATGATTGAAATTTATAACGAACAAGTGAGGGATCTTCTAGTCAGCGATGGCTCCAACAAAAGATATCCTCGAACAAACAACTCTCAGTTAAGTGGACTTAATGTCCCAAATGCAAGCTGGGTTCCAGTCACTTGTACTCAAGATGTTCTTGATTTGATGAAGATCGGCCATGGCAATCGTGCGGTAGGTGCTACGGCCCTAAACGAGCGAAGCAGCCGGTCTCATAGTGTTTTGACAGTTCATGTTCTTGGGAAAGAGTTGGTTTCTGGATCCATTCTGAGAGGCTGTCTCCATCTGGTGGACTTGGCTGGAAGTGAGAGAGTGGATAAATCTGAGGCTGTGGGAGAGAGGCTGAAGGAAGCTCAACATATAAATAGATCTCTCTCTGCACTAGGAGATGTCATCTCAGCTCTTGCGCAAAAAAGCGCTCATATTCCTTACCGAAACAGCAAGCTTACTCAGCTGCTGCAAGATTCCTTAGGAGGGCAAGCCAAAACATTGATGTTTGTCCATATAAATCCTGATGTGAATGCGCTCGGGGAGACTGTTAGCACACTCAAGTTTGCTGAGAGAGTTGCATCCGTAGAACTAGGTGCTGCTCGATCTAATAAAGAAAATGGTGAAATCAGAGAATTAAAGGAGGAGCTGTCAAGCCTTAAATCAGTATTGGAGAAAAAGGAAGCAGAAATCGAGAGATTGAAGAGCGCAAATGCTCGAACAATTGTAGAAACTCAAAAGACAAGGCCTGTTTCTCCCTTCAGGATGCCAAGAAGTGGTATTTCTGCCAGTTTGAGGCCTGAAAATGGTCAAGTCGCTGAACCTAGAAACTCAGAGGCCAGAAGTTGTTCTTCAGGTAAGCAAAGAAGGTCGAGATTTCCCTCTGTGCTTACAGAGAAGGAGATCATTCCAAAGATTCATCTGCAATCCGAACAGAAATCAGACAGCTCAGGAAAAACGAGCTCACCATCTCCGCCTGTTAGAAGATCACTATCAACAGACAGAGGGAGCATCATTAGAAGCAAGATTAAGAATAATGTAGCCATCGAGAATCAACCAATCTTGAAGTTTCCTTTTCCGTCGAGAATTCCTATCAACAAATCTGTTTCAACAACGGCAATACCTTGGAACGAGAAGAAAGGAACAAACGACAAAGTTGCAGATGCGTTTTTGAACGTGCATAAAGTGGCTAGTTCGGAAAAAATTTTCCCAGAGCAAGAAGAGGAGAATTTTGTGCAAGCTCTTAATGGTGGAATTAGGAAGAGCAGAATTGAGGGCACGTCTAAAGCCAAACAGCATCAACTTCCAGTAGCTAGGATTCAGAATATTGACGAAGTGACGACGTTGCTTGGTGATATAAACGTCCATGAGAAGACTCGAAAGAATGAGTTCTCCGAGAGGGAAAATGATCATCTTATAGGATCTCAATCTTCCAGTAGAGACAACTCCAGCAAGCGAAGCCGACAGAACTTCTCAAGAAACTCTCAAAATGTGGAACCAAGGGGAACAGCTGCAGTAGAATCCATGATGGCTGGGAAGCTTGAAAACAAGCTATCAAATGGTGGAATTCGCCACACGAAGGAAGGAAACAACACGACTGTTTCAAATTCAAGATGGAGCGGAACTTCGCCTCGCGGAAAATATTTTGTTTTGGCCTGA 3342 43.54 MPHESYSGSIFTSPGKNLRGLKALVCNNNEAFFTDEIINDDELAQRKAEEAASRRSQAAEWLRRMDHGASESLSKEPSEEGFCLALRNGLILCNVLNKVNPGAVYKVVENPVIAVQSTEGAAQSAIQYFENMKNFLDAVKDMKLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKQAGGIGVWRYGGTVRIVSFPKDAPSSLIGSESADESESSRYEQLLEFLNYSNEVSEEESRIANTMAFLFDHFGLRLLQAYLQESNGYEDLPLSTMTIDMLLSKVVKDLSALLVSQGTQLGLFLKRILKNDAGFLSKSEFMEIIGQYIANRRSLVSNDFSKFCVCGGKLEVVQKKDSVSDGYGELMDIQQRQLQMLKSSFQGTKLEIKQIHASWEEELRRLVHHLKSLEQTSSSYQRVLEENRQLYNQVQDLKGTIRVYCRVRPFLPEQSNVQSTVDYIGENGNIMIVNPLKQAKDARRVFCFNKVFGTNVTQEQIYDDTQSLIRSILDGFNVCIFAYGQTGSGKTYTMSGPDLMTEQTWGVNYRALRDLFEISKTRVNMIKYEVGVQMIEIYNEQVRDLLVSDGSNKRYPRTNNSQLSGLNVPNASWVPVTCTQDVLDLMKIGHGNRAVGATALNERSSRSHSVLTVHVLGKELVSGSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSAHIPYRNSKLTQLLQDSLGGQAKTLMFVHINPDVNALGETVSTLKFAERVASVELGAARSNKENGEIRELKEELSSLKSVLEKKEAEIERLKSANARTIVETQKTRPVSPFRMPRSGISASLRPENGQVAEPRNSEARSCSSGKQRRSRFPSVLTEKEIIPKIHLQSEQKSDSSGKTSSPSPPVRRSLSTDRGSIIRSKIKNNVAIENQPILKFPFPSRIPINKSVSTTAIPWNEKKGTNDKVADAFLNVHKVASSEKIFPEQEEENFVQALNGGIRKSRIEGTSKAKQHQLPVARIQNIDEVTTLLGDINVHEKTRKNEFSERENDHLIGSQSSSRDNSSKRSRQNFSRNSQNVEPRGTAAVESMMAGKLENKLSNGGIRHTKEGNNTTVSNSRWSGTSPRGKYFVLA 1113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17799350 17805650 + BLOR11675 Blo03g00494 57958

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00494 1113 MobiDBLite consensus disorder prediction 1084 1104 - -
Blo03g00494 1113 Gene3D - 44 173 IPR036872 -
Blo03g00494 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 430 793 IPR027417 -
Blo03g00494 1113 MobiDBLite consensus disorder prediction 1036 1063 - -
Blo03g00494 1113 PANTHER KINESIN-LIKE PROTEIN KIN-14F 25 1105 - -
Blo03g00494 1113 SUPERFAMILY Calponin-homology domain, CH-domain 49 194 IPR036872 -
Blo03g00494 1113 Gene3D Kinesin motor domain 372 759 IPR036961 -
Blo03g00494 1113 Pfam Calponin homology (CH) domain 54 173 IPR001715 GO:0005515
Blo03g00494 1113 MobiDBLite consensus disorder prediction 1079 1113 - -
Blo03g00494 1113 ProSiteProfiles Calponin homology (CH) domain profile. 52 173 IPR001715 GO:0005515
Blo03g00494 1113 ProSiteProfiles Kinesin motor domain profile. 429 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo03g00494 1113 Coils Coil 385 405 - -
Blo03g00494 1113 MobiDBLite consensus disorder prediction 836 853 - -
Blo03g00494 1113 SMART kinesin_4 427 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo03g00494 1113 Coils Coil 409 429 - -
Blo03g00494 1113 MobiDBLite consensus disorder prediction 1021 1063 - -
Blo03g00494 1113 MobiDBLite consensus disorder prediction 805 899 - -
Blo03g00494 1113 SMART ch_5 54 171 IPR001715 GO:0005515
Blo03g00494 1113 Coils Coil 764 805 - -
Blo03g00494 1113 PANTHER KINESIN-LIKE PROTEIN KLP-3 25 1105 - -
Blo03g00494 1113 MobiDBLite consensus disorder prediction 1021 1035 - -
Blo03g00494 1113 PRINTS Kinesin heavy chain signature 707 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo03g00494 1113 PRINTS Kinesin heavy chain signature 627 644 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo03g00494 1113 PRINTS Kinesin heavy chain signature 658 676 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo03g00494 1113 PRINTS Kinesin heavy chain signature 504 525 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo03g00494 1113 Pfam Kinesin motor domain 435 756 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo03g00494 1113 MobiDBLite consensus disorder prediction 870 899 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00494 K10406 KIFC2_3; kinesin family member C2/C3 - qsu:111992149 1516.13
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00494 Blo-Chr3:17799350 Blo10g00379 Blo-Chr10:6291444 0 dispersed
Blo11g00495 Blo-Chr11:4548212 Blo03g00494 Blo-Chr3:17799350 2.88E-89 dispersed
Blo03g00494 Blo-Chr3:17799350 Blo10g00071 Blo-Chr10:679557 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g727 Blo03g00494 . . . . . . . . . Cma01g01058 Cma09g01033 Car01g00932 Car09g00939 . Cpe06g00841 Cpe02g00838 Bhi09g01820 . . . . Mch11g1312 . . . . . . . . Cone6ag0001 Cone9ag0003 . . Lsi02g01801 Csa07g01062 . . . . . . Bpe11g00603 . . Bma14g00667 . Cmo01g01099 Cmo09g01035 . . . . . . . . . . . . . Cla09g02100 Cam09g2186 Cec09g2255 . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007328 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 2 1 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00494 Blo_Chr03 FPKM 45.455311 48.83651 38.462341 39.402016 23.151911 19.100344 25.966354 55.297382 56.689514 53.654572