Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00518 TTAAAGCTTTTTCTCGCAATGGGTTTACGGGGTTTCAATGGTGCCTTTATGTTTTTCTTTGTAGTTTTTGGTGGAATTCTAGTGGGTTTCGCAGAACACAATGTCTATAGTGAGAAGTACATAAGTTGGGATGATTTGAAGGTGGATAGAATGGAGAGAATGAGTTCAGTCTACCAAACTAATCAAAGTCGAGTGATCGTTGTCGATAAGCATGGCAGAGGAGATTCTGTTACAGTTCAAGGAGCAGTTGATATGGTTCCTGAACAAAATACAAAAAGAGTAAAAATTTACATTCGTCCAGGAATTTACAGAGAGAAGGTCTCTGTTCCAAGAAACAAACCATATATTTCCTTCATTGGCGATAAGAATCGAGCTTCCAACACTGTAATTTCATGGAACAACAAAGCATCTGACAAAGACGAACATGGGAACAACATAGGAACGTTTAGATCAGCATCTGTGTCCATCGAATCAGATTACTTTTGCGCCACAGGGATTACATTCAAGAACACAATAAAGGTGGTGCCTAAAGGAGTTGGAATGCAAGCAGTTGCACTGAGAATAGCAGGAGACAAAGCAATGTTCTATAAAGTCAGAATCGTGGGAGATCAGGACACTCTTCTAGATGAATCTGGAACACACTATTTCTACCAATGTCACGTTCAAGGAAGCCGTTGCATGCTTAGATCGACGGCCAAGAACTACGGATCCATCGCAGCTCATCACAGGGATTCACCTGATGAAGACACAGGATTCTCCTTCGTCCGCTGCAGCATCAATGGAACCGGCAATGTTCTTTTGGGAAGAGCTTGGGGGAACTATTCACGAGCAATCTATTCTTATTGTTCTATGACAGACATTATAAATCCTCGAGGCTGGAGCGACTGGAACTACCCATCAAGACAAAGGACTGCGGTATTTGGAGAGTACAGATGCAGAGGCAAAGGAGCTGATACAAGAAGAAGAGTGTCGTGGTCCAAGTCTTTCAACCGAAGGGAAGCCGGGCCTTTTATGAACTTGAAGTTCATCGATGGAGAGCAGTGGCTTAGACTACACAGAGAGAAGAAACCCTATTTACCTTAG 1083 42.66 LKLFLAMGLRGFNGAFMFFFVVFGGILVGFAEHNVYSEKYISWDDLKVDRMERMSSVYQTNQSRVIVVDKHGRGDSVTVQGAVDMVPEQNTKRVKIYIRPGIYREKVSVPRNKPYISFIGDKNRASNTVISWNNKASDKDEHGNNIGTFRSASVSIESDYFCATGITFKNTIKVVPKGVGMQAVALRIAGDKAMFYKVRIVGDQDTLLDESGTHYFYQCHVQGSRCMLRSTAKNYGSIAAHHRDSPDEDTGFSFVRCSINGTGNVLLGRAWGNYSRAIYSYCSMTDIINPRGWSDWNYPSRQRTAVFGEYRCRGKGADTRRRVSWSKSFNRREAGPFMNLKFIDGEQWLRLHREKKPYLP 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19417878 19419459 + BLOR11699 Blo03g00518 57982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00518 360 Pfam Pectinesterase 66 345 IPR000070 GO:0030599|GO:0042545
Blo03g00518 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 351 - -
Blo03g00518 360 PANTHER PECTINESTERASE QRT1 28 351 - -
Blo03g00518 360 Gene3D - 59 355 IPR012334 -
Blo03g00518 360 SUPERFAMILY Pectin lyase-like 63 350 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00518 Blo-Chr3:19417878 Blo03g01478 Blo-Chr3:41564299 2.41E-148 dispersed
Blo03g00518 Blo-Chr3:19417878 Blo05g00245 Blo-Chr5:2743288 6.95E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00518 K01051 - jre:108983471 489.96