Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g00538 | ATGGCATCCTCTTCGGATTCATGGGTAAAGGAATATAACGAAGCAGTTAAACTTGCTGATGATATCAATGGCATGATCTCTGAGCGAAGTTCGGTTTCTGTATCCGGACCAGAAGCACAGCGCTATGCCTCCGCTATTCGCAGAAAGATCACAATATTGGGGACTAGACTTGATAGCTTACTAGCACTCTTATCTAAACTTCCTGGAAAGCAGCCCATCTCTGATAAAGAGATGAATCGCCGACGGGACATGGTTACAAATTTAAGAACAAAGGTTACCCAAATGGCTTCACAACTGAACATGTCGAACTTTGCCAATCGTGACAGCTTGCTTGGTCCAGAAATTAAAGCAGCTGATCCCATGAACAGAACTGTGGGTCTGGACAACCAAGGTCTAGTTGGTCTTCAGCGACAAATTATGAGAGAGCAAGATGAGGGTCTTCAGAAGCTGGAGGAGACTGTAATAAGTACAAAACATATTGCTCTGGCTGTCAACGAAGAACTTGACCTTCACACGAGACTAATTGATGACTTGGACCAACATGTAGATGTTACTGACTCTCGATTAAGGCGAGTGCAGAAGAACTTGGCAATTTTAAACAAGCGTACAAAAGGAGGTTGCACTTGCTTGTGCATGATTTTGTCGGTTGTCGGAATCGTAATTCTGGTTGTTGTCATATATCTTCTCGTCAGGGGTGTCGTGAGGACACTGCAGGGGCGTCCCGGGACACTGCAGGGGCATCCCGGGACACCGCAGGGGCTTCCCGGGACACCGCAGGGGCGTCTCGGGACACTGCAGCAGGACACCGCAGGGGCGTCCCGGGACACCGCAGGGGCTTCCCTGGACACCACAGGGGCGTCCTGA | 864 | 49.31 | MASSSDSWVKEYNEAVKLADDINGMISERSSVSVSGPEAQRYASAIRRKITILGTRLDSLLALLSKLPGKQPISDKEMNRRRDMVTNLRTKVTQMASQLNMSNFANRDSLLGPEIKAADPMNRTVGLDNQGLVGLQRQIMREQDEGLQKLEETVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCTCLCMILSVVGIVILVVVIYLLVRGVVRTLQGRPGTLQGHPGTPQGLPGTPQGRLGTLQQDTAGASRDTAGASLDTTGAS | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 20802549 | 20813170 | - | BLOR11719 | Blo03g00538 | 58002 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g00538 | 287 | SMART | tSNARE_6 | 132 | 199 | IPR000727 | - | |
Blo03g00538 | 287 | Gene3D | - | 139 | 201 | - | - | |
Blo03g00538 | 287 | CDD | SNARE_Qc | 140 | 197 | - | - | |
Blo03g00538 | 287 | PANTHER | TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 227 | - | - | |
Blo03g00538 | 287 | SUPERFAMILY | SNARE fusion complex | 128 | 198 | - | - | |
Blo03g00538 | 287 | Pfam | SNARE domain | 174 | 225 | IPR000727 | - | |
Blo03g00538 | 287 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 137 | 199 | IPR000727 | - | |
Blo03g00538 | 287 | MobiDBLite | consensus disorder prediction | 240 | 287 | - | - | |
Blo03g00538 | 287 | PANTHER | SYNTAXIN | 1 | 227 | IPR045242 | - | |
Blo03g00538 | 287 | SUPERFAMILY | t-snare proteins | 20 | 100 | IPR010989 | GO:0016020|GO:0016192 | |
Blo03g00538 | 287 | MobiDBLite | consensus disorder prediction | 257 | 287 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00538 | Blo-Chr3:20802549 | Blo07g00879 | Blo-Chr7:27533929 | 1.36E-112 | dispersed | |
Blo03g00538 | Blo-Chr3:20802549 | Blo03g00554 | Blo-Chr3:21846350 | 2.36E-09 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g00538 | K08503 | - | cit:102608030 | 364.385 |