Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00567 ATGAACATTTACATTGCAGCCTTCATCTTCATAATCCCCATTTTCCTACTTCTTAACAGAAGAAGTAAATCATCCCAAAGGCTCCCTCCTGGCTCACTTGGAATTCCCTTCATAGGCCAAAGCATTAGCTTGCTCCGAGCCATGAGAAAAAACACAGCAGAACAATGGCTGCAGCAAAGGATCAGAAAGTATGGACCAGTTTCCAAGCTCAGTCTCTTCGGTAAACCGACAGTTTTCATCAGCGGACAGGCCGCCAACAAGTTTGCTTTCAACAGTGACGAGACCACCCTCAGTAACCAACAAGTCAAGTCCGTCACGATGATCTTAGGCGACCGCAACATATTCGAGCTCAGCAGCGAAGATCATAAACGTGTTAGAGGCGCCCTGCTTTCGTTCCTGAAGCCGGATTCATTGAAAAAGTACATCGGAAGAATGGAAGAAGAAGTAAGGGAGCATCTCAAGACCCATTGGCAAGGACAGCAAGAAGTTTCTGTCTTGCCGTTGATGAAGACGCTCACGTTCAACGTGATATGTTCTGTTATGTTCGGAATCGAGAAAGGAATCGCTAGAGATAAGTATATGAACTGCTTTCAAACGATGATAGAAGGAGCATGGTCGGTGCCGATCGACTTGCCGTTCACTCGATACAACCGGAGCCTGCGGGGGAGTAGACGGGTGCAAGGGATGTTGAAGGAACTTATCGAAGAGAAGAGAGTAAAACTCGAAAAAAAGGTCGATTCTCAGCAGCAAGACCTGATCTCTCACTTGCTTTGCGTTCAAAACGAAAGCGGCAAAGACGGAATCAGCGAGAAGGAAATAGTGCACAATGCTGCGACTATCATGGTTGCGGGATACGACACGACTGCTGTGCTGCTCACTTTCATTATGAGGCTGCTGGCTAATAATCCTGCAGTTTATGGAGCTGTTCTTCAAGAGCATGAAGAGATAGAAAAAAGCAAGCTCCCTGGAGAGTCACTGACGTGGGAAGATCTAAACAAGATGAAGTACACATGGAGGGTGGCCATGGAAACGTTGAGAGTCATCTCTCCCGTGTTCGGCACATTCAGACAGGTTCTAAAAGATGTCGAATTTGATGGGTATCTTATTCCAAAGGGATGGCAAATTTTCTGGGCGGCATCGATGACTCACATGGACGACAGCATATTCCCTGAGCCATCGAAGTTTGATCCGAGTAGATTTGAAAGCCAAGCATCTATTCCTCGTTTTTGCTTCGTGGCTTTTGGGGGCGGGCCGAGAGTCTGTCCAGGCAATGAGTTTGCAAGGATTGAGACTCTTGTTACCATTCATTATCTCATAACTCACTTCACATGGAAGCTCACTACTGATGATCTTTTCATAAGAGATCCCTTGCCAATTCCAACTAAAGGATTACCGATTCAAATTACTCCACGAAAACCATTATAA 1425 45.89 MNIYIAAFIFIIPIFLLLNRRSKSSQRLPPGSLGIPFIGQSISLLRAMRKNTAEQWLQQRIRKYGPVSKLSLFGKPTVFISGQAANKFAFNSDETTLSNQQVKSVTMILGDRNIFELSSEDHKRVRGALLSFLKPDSLKKYIGRMEEEVREHLKTHWQGQQEVSVLPLMKTLTFNVICSVMFGIEKGIARDKYMNCFQTMIEGAWSVPIDLPFTRYNRSLRGSRRVQGMLKELIEEKRVKLEKKVDSQQQDLISHLLCVQNESGKDGISEKEIVHNAATIMVAGYDTTAVLLTFIMRLLANNPAVYGAVLQEHEEIEKSKLPGESLTWEDLNKMKYTWRVAMETLRVISPVFGTFRQVLKDVEFDGYLIPKGWQIFWAASMTHMDDSIFPEPSKFDPSRFESQASIPRFCFVAFGGGPRVCPGNEFARIETLVTIHYLITHFTWKLTTDDLFIRDPLPIPTKGLPIQITPRKPL 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 22270962 22272967 + BLOR11748 Blo03g00567 58031

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00567 474 Pfam Cytochrome P450 29 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Blo03g00567 474 Coils Coil 231 251 - -
Blo03g00567 474 SUPERFAMILY Cytochrome P450 21 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PANTHER OS07G0520300 PROTEIN 10 470 - -
Blo03g00567 474 PANTHER CYTOCHROME P450 26 10 470 - -
Blo03g00567 474 Gene3D Cytochrome P450 18 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g00567 474 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00567 - - - fve:101313803 678.707
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00567 Blo-Chr3:22270962 Blo03g01146 Blo-Chr3:37874100 1.52E-72 dispersed
Blo04g01232 Blo-Chr4:23897202 Blo03g00567 Blo-Chr3:22270962 7.88E-44 dispersed
Blo10g00930 Blo-Chr10:28394628 Blo03g00567 Blo-Chr3:22270962 6.41E-53 transposed
Blo14g00705 Blo-Chr14:16609189 Blo03g00567 Blo-Chr3:22270962 8.16E-28 transposed
Blo14g00824 Blo-Chr14:28918458 Blo03g00567 Blo-Chr3:22270962 2.42E-22 transposed
Blo03g00567 Blo-Chr3:22270962 Blo03g01447 Blo-Chr3:41065637 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g493 Blo03g00567 . Bda07g00356 . . Bpe08g01128 . . . . . . . . . . . Bhi09g01888 . . . . . . . . . . . . . . . . . Lsi04g01209 . . . . . . . . . Bma07g01302 . . . . . . . . . . . . . . . . . Cla05g01495 Cam05g1612 . Cco05g1641 Clacu05g1593 Cmu05g1495 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00567 Blo_Chr03 FPKM 2.208054 1.731869 4.89723 3.960258 3.777123 2.504836 3.321288 4.239591 5.420186 3.471603