Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00589 ATGGACTCCCATCAGCTCTTTGGGTGCTCATCATCTTCTTCAAACGTCCCAAGTAGAGTGCTCAGCTCTTTGAATTACAACGTTGGAAACTTTCCCAATTCGGCTTTTTTATCTCACATTGATTCAGATTCTATTACAAATTTGAGTGATAGTCAAGAGCAAAGCTCGACTGAGAATCTTTCTGGAGTCAGCCCTTCTTGTAACTCTTCGATCGACACGAACAGCTGTTTCCTACCCATCAGCGATTCACCAGATTACTGCCAAGGGAGTCCACAGCTTTATCTGGGTGCGGCTGAGTTTTCACGGGATGTGAGCTCGATCCGAAACATAAGGCACACTTTACAAGAATTAGAGACTGCTCTTATGGGACCTGACGAAGAGGAAGACGAAATCAGCAAACCAAATTCTTCTTTTGGGGAAAGTAGTAGATCTCAAAAACCAGGGCAGGGATCAATGTTATGGAGCCAAGATTGCCATGATTCACCCGCTATCCTTTCTCAGCCTTCATTCGTCTCTCGAAGCTGGCAGACAGGAGAAGCCATCCGTTTTGAGAAACGGCAGAAGGCAATGGAGGAAGAATTTTTGCAGGGATTTCCATCTGGCAATTTGAAGCAACTACTGATTGCTTGTGCCAAAGCTCTTGCAGAAAATAACTTGGCTAATTTTGATAAGTTGGTTGAAAAGGCAAGAAGTGCTGTCTCGATAAGTGGAGAACCAATACAACGACTCGGAGCTTATTTGGTAGAAGGACTTGTCGCTAGGAAGGAGGAATCGGGTGCTAATATCTACCATGCCCTTAAGTGCAGGGAGCCGGAAAGTAGTGATTTATTATCGTACATGCACATTCTTTACGAAATCTGCCCTTATTTGAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAAGAATGAAGATTGCATCCATATAATAGACTTTCAGATTGCTCAAGGGACCCAGTGGATGACTCTCCTTCAAGCACTCGCGGCTAGACCTGGCGGGCCGCCCTGCGTGAGGATTACTGGTATCGATGACCCTGTTTCTAAATATGCTCGAGGGGGCGAATTAGAGGCGGTGGGGAGGAGATTGGCTAACATATCAGAAAATTTCCACATCCAAGTAGAGTTTCATGGAGTGCCTGTTTTCGCCCCAGATGTCACCCTTGACATGCTCGATGTCAGGCCGGGGGAGGCTCTTGCCGTGAATTTCCCTCTGCAGCTCCATCACACCCCAGACGAGAGCGTCGATGTGCGTAATCCTCGAGACGAGCTTTTGAGAACCATCAAATCGCTCTCTCCCAAAGTTGTCACATTGGTCGAGCAAGAATCGAACACAAACACGACTCCTTTCTTCTACAGGTTTGTCGAAGCACTCGAGTATTATTTGGCCATGTTTGAGTCGATCGATGTTACTCTTCCGAGAAATAGCAAGCAGCGTATAAACGTGGAGCAGCATTGTTTAGCACGAGATATAGTTAATGTCATCGCTTGTGAGGGGACTGAAAGGGTAGAGCGGCATGAGCTCTTCGGGAAATGGAAGTCAAGGTTGACAATGGCTGGATTTAAGCAGTTTCGGTTGAGCTCTTATGTGAATTATGTCATAAGGAGCTTGCTAAAGTGCTATTCGGAGCATTACACACTGGTCGAAAAAGACGGCGCCATGCTGTTGGGTTGGAAGGAAAGGGACCTTATATCTGCATCGGCTTGGTACTGA 1722 46.34 MDSHQLFGCSSSSSNVPSRVLSSLNYNVGNFPNSAFLSHIDSDSITNLSDSQEQSSTENLSGVSPSCNSSIDTNSCFLPISDSPDYCQGSPQLYLGAAEFSRDVSSIRNIRHTLQELETALMGPDEEEDEISKPNSSFGESSRSQKPGQGSMLWSQDCHDSPAILSQPSFVSRSWQTGEAIRFEKRQKAMEEEFLQGFPSGNLKQLLIACAKALAENNLANFDKLVEKARSAVSISGEPIQRLGAYLVEGLVARKEESGANIYHALKCREPESSDLLSYMHILYEICPYLKFGYMAANGAIAEACKNEDCIHIIDFQIAQGTQWMTLLQALAARPGGPPCVRITGIDDPVSKYARGGELEAVGRRLANISENFHIQVEFHGVPVFAPDVTLDMLDVRPGEALAVNFPLQLHHTPDESVDVRNPRDELLRTIKSLSPKVVTLVEQESNTNTTPFFYRFVEALEYYLAMFESIDVTLPRNSKQRINVEQHCLARDIVNVIACEGTERVERHELFGKWKSRLTMAGFKQFRLSSYVNYVIRSLLKCYSEHYTLVEKDGAMLLGWKERDLISASAWY 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23047572 23049293 + BLOR11770 Blo03g00589 58053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00589 573 Pfam GRAS domain family 203 572 IPR005202 -
Blo03g00589 573 Coils Coil 212 232 - -
Blo03g00589 573 ProSiteProfiles GRAS family profile. 194 573 IPR005202 -
Blo03g00589 573 MobiDBLite consensus disorder prediction 120 157 - -
Blo03g00589 573 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 11 572 - -
Blo03g00589 573 MobiDBLite consensus disorder prediction 135 157 - -
Blo03g00589 573 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 572 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00589 Blo-Chr3:23047572 Blo10g00862 Blo-Chr10:27163983 7.60E-175 dispersed
Blo03g00589 Blo-Chr3:23047572 Blo02g00135 Blo-Chr2:1150119 1.10E-169 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12118 PF03514 GRAS 2.80E-130 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00589 - - pmum:103342480 816.609