Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00609 ATGAGATTTCGCCTCTTAATCTCAGCGGTGATCCTCCTCTGCCATCGGTTCAGTTCTTCCGATACCAGCGATACTATCAAACAAGGTCAATCAATCTCCTTTCCGGAGATCATACTCTCCCCCGGGAAAAGGTACGTGCTCGGATTCTTTCATCCGAAACAGGAGATGAAATTCTACTTGGGAATATGGTATGCGGCGGATCAAGACCGCTCCGCCATTTGGGTAGCGAATCGAGACTCCCCCCTTTTAATCTCCGCTGCTTTGAACTTAACAGAAGAAGGAAACCTGGTTATCTCCAATGGCAATATGACATATGAGGTAGCCAACACCTCCGCTGGTCCCGGAGCTCAGGCGAGGTTGCTAGATTCCGGCAATCTCATTGTTCAAAAGGGAGTATCTGAGCTGTTTTGGCAGAGCTTTGATAATCCTACAGACAACCTTCTGCCAGGAATGAATATTGGATATGATTTGAGAACAAATGGTTCTTGGTATTTACAGTCGTGGAAAAGCACCACTGACCCTTCGCCGGGAAATTTCACTCTTCAGTTAGATCCCTCGACGTTTAATCTTGCCGTTTACAATTATAGCGATCAGTACTGGGTAGGCAACCCTTATCAATATTTAGGAAGCAATTTTTACGTGAGTAGGAGTCCAAGCAGTGCTTATATCACATGGATTCTAAGCAATAGTTTGAAGATTTCTACGTTATTTCTTGATCCAACAGGACAGCTCGTCCGGAAATCATGGTCGGAAGGTTCTCTCAGTTGGGAATTTTCAAATTCATCGAAATGTGGTCTGGGTTCATGTGGATCTAACAACATCTGCAATGTGAGTTCTCCCGCGCAGTCTCAGTGCTGCTGTTTGCCAGGTTTTTTTCGCGACGGTCAAAATAATAACAGTGGTGGAAATTTTACCGGAAACTGTGTTAGGCGAACTAACTTCACTTGTGACAAGAAAAAGGAAAACGATGTTGGGTTTTCCAACTGGCCCAACATAGTTCCGCCGGCTAATATAATTCTAGCGAACGCCACGATTGCGACCATGGAAGACTGTCAGTCCTCTTGCCGGAAAAATTGTTCTTGCAGCGGGTTTTCCTTCATCGTTAGTCAACAGCAGTGTCTGCTTTGGACCGGCCAGCTTTTAAATATGCAGACAACGTCTGATGTTGATAGCAGTAGTCTAGATTTCAATCTGAAAATTTTTGTTTCAGAGAAGAATCCTGGAAACTCTCCGGGACCCGATAAAGGCGACCGGACCAAAAAAATTGAAGCAACGAACAAGGTTCAAGTTTGGGTCATCGCTGTGCTCACTTGTTCTCTAACACTCTTCGCTCTCGCACTTCTTCTGTATTCTGCAAGAAAAAGGCTTCTACGTAAAGTGGGGGAAGATCTGCTACTTTTCGATCTAAAAATGAATCCAAGAGACGATGAATCGGAGTTTTCTGAAACGTATGGAAAAGAAAGGTCGAACGAAGTGAAAATGCCATTGTTCAGCTTCTCGAGCGTGAGTGCTGCTACAGATAATTTCTCGGACGAGAATAAGCTCGGGGAGGGAGGGTTTGGACCAGTTTACAAGGGGAAGACACTGAAAGGGAACGAAATAGCAGTGAAAAGGCTGTCTCAAAAATCAAGGCAAGGATGGGAGGAGCTGAAAAATGAAGCTCTGCTCATAGCCAAACTTCAACACAAGAACCTTGTTAGACTTCTGGGGTGTTGCATAGAGGGAGACGAAAAGATACTGATTTACGAGTACATGCCCAACAAAAGCTTGGATTTTTTCCTCTTTGACCCAGAGCGGAGGAAGATTTTGGATTGGGGAATGAGAGTTCGGATCATCGAAGGAATCGCCCAAGGGCTTCTATATCTCCATGAATACTCCAGGTTTAGAATTGTTCATCGAGATTTGAAAGTAAGCAACATTCTCTTGGACGCCGAAATGAACCCTAAAATAGCAGATTTCGGAATGGCCAGAATGTTCGGCGGCGACGAGTCGGAGGCAAACACGAATCGGATCGTCGGAACTTTTGGTTACATGGCGCCGGAGTATGCTCTGGAGGGCACTTTCTCGACAAAATCCGACGTGTTCAGCTTCGGAGTTTTGTTGTTGGAGATTGTCAGCGGCCGGAAAAATACTGGTTTCTATAGCAACAAAGGCAGCAATCTTCTCGGACATGCCTGGGATTTGTGGACTAGTGGAAAGGGTCTAAATTTGATAGATCCAGATTTAAAAGAAGTGACGTCTTCTCCGGTGGGACTGAGATATGTGAATATTGCTCTTCTCTGCGTTCAAGACAGCCCAGATGAGAGACCCTCCATGTCTAACGTTGTCTCCATGCTTGGCAACGAAGGTATTGCCCTGTCTAAACCCAACCAACCTGGTTTCTTGAACATGAGAAGCGGAGCAACCTCTGTTTCCAGCAAGAGCCGGGTGGAGATATCTTCCGTGGATGAAACTCCGATCGGAAAGCCAGACCCTCGATGA 2481 45.55 MRFRLLISAVILLCHRFSSSDTSDTIKQGQSISFPEIILSPGKRYVLGFFHPKQEMKFYLGIWYAADQDRSAIWVANRDSPLLISAALNLTEEGNLVISNGNMTYEVANTSAGPGAQARLLDSGNLIVQKGVSELFWQSFDNPTDNLLPGMNIGYDLRTNGSWYLQSWKSTTDPSPGNFTLQLDPSTFNLAVYNYSDQYWVGNPYQYLGSNFYVSRSPSSAYITWILSNSLKISTLFLDPTGQLVRKSWSEGSLSWEFSNSSKCGLGSCGSNNICNVSSPAQSQCCCLPGFFRDGQNNNSGGNFTGNCVRRTNFTCDKKKENDVGFSNWPNIVPPANIILANATIATMEDCQSSCRKNCSCSGFSFIVSQQQCLLWTGQLLNMQTTSDVDSSSLDFNLKIFVSEKNPGNSPGPDKGDRTKKIEATNKVQVWVIAVLTCSLTLFALALLLYSARKRLLRKVGEDLLLFDLKMNPRDDESEFSETYGKERSNEVKMPLFSFSSVSAATDNFSDENKLGEGGFGPVYKGKTLKGNEIAVKRLSQKSRQGWEELKNEALLIAKLQHKNLVRLLGCCIEGDEKILIYEYMPNKSLDFFLFDPERRKILDWGMRVRIIEGIAQGLLYLHEYSRFRIVHRDLKVSNILLDAEMNPKIADFGMARMFGGDESEANTNRIVGTFGYMAPEYALEGTFSTKSDVFSFGVLLLEIVSGRKNTGFYSNKGSNLLGHAWDLWTSGKGLNLIDPDLKEVTSSPVGLRYVNIALLCVQDSPDERPSMSNVVSMLGNEGIALSKPNQPGFLNMRSGATSVSSKSRVEISSVDETPIGKPDPR 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24793628 24796707 - BLOR11790 Blo03g00609 58073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00609 826 CDD STKc_IRAK 515 779 - -
Blo03g00609 826 ProSiteProfiles PAN/Apple domain profile. 316 401 IPR003609 -
Blo03g00609 826 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 18 808 - -
Blo03g00609 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Blo03g00609 826 CDD PAN_AP_plant 312 400 - -
Blo03g00609 826 MobiDBLite consensus disorder prediction 797 826 - -
Blo03g00609 826 Gene3D Transferase(Phosphotransferase) domain 1 585 788 - -
Blo03g00609 826 ProSiteProfiles Bulb-type lectin domain profile. 23 141 IPR001480 -
Blo03g00609 826 PIRSF SRK 1 825 IPR024171 GO:0004674
Blo03g00609 826 Pfam Protein tyrosine and serine/threonine kinase 512 779 IPR001245 GO:0004672|GO:0006468
Blo03g00609 826 Gene3D Hepatocyte Growth Factor 319 394 - -
Blo03g00609 826 Pfam PAN-like domain 323 383 IPR003609 -
Blo03g00609 826 ProSiteProfiles Protein kinase domain profile. 509 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00609 826 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 808 - -
Blo03g00609 826 SUPERFAMILY Hairpin loop containing domain-like 344 385 - -
Blo03g00609 826 SMART serkin_6 509 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00609 826 MobiDBLite consensus disorder prediction 797 813 - -
Blo03g00609 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 174 IPR036426 -
Blo03g00609 826 SUPERFAMILY Protein kinase-like (PK-like) 491 779 IPR011009 -
Blo03g00609 826 Gene3D - 18 140 IPR036426 -
Blo03g00609 826 CDD B_lectin 38 143 IPR001480 -
Blo03g00609 826 Pfam D-mannose binding lectin 73 169 IPR001480 -
Blo03g00609 826 SMART blect_4 23 143 IPR001480 -
Blo03g00609 826 SMART ntp_6 321 400 IPR003609 -
Blo03g00609 826 Pfam S-locus glycoprotein domain 207 292 IPR000858 GO:0048544
Blo03g00609 826 Gene3D Phosphorylase Kinase; domain 1 483 584 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00609 Blo-Chr3:24793628 Blo03g00614 Blo-Chr3:24889035 0 dispersed
Blo03g00609 Blo-Chr3:24793628 Blo03g00613 Blo-Chr3:24873821 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84185 PF07714 PK_Tyr_Ser-Thr 1.20E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00609 - - qsu:112040619 766.533