Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00613 ATGACATACACGGTAGCCAACACCTCCGCCGGTCCCGGAGCTCAGGCGAGGTTGCTAGATTCCGGCAATCTCATTGTTCAAAAGGGAGAATCTCGGCCGCTTTGGCAGAGCTTTGATAATCCTACACAAACCCTTCTGCCAGGAATGAATATTGGATATGATTCGAGAACAAATTATTCTAGGTATTTACAGTCGTGGAAAAGAACCCTTGACCCTTCGCCGGGAAATTTCACTCTTCGGTTAGATTTCCTGACGCTTAATCTTGTCGTTTACAATTTTAGCGATCAGTTCTGGGCACACAACTCTTCTCAATATTTAGGAAGCAATTTTTACGTAAATAGAAGTCTAAACAGTGCCTATATCACATGGTTGCCATTGCCAAGCAATAGTTCGAAGCTTTCTAGGTTAGTTCTTGATTCAAAAGGACTGCTCCTCCAGAAATCATGGTCGGAAAGTTCTCTCAGTTGGAAATCTTCAAATTCATCGAAATGTGGTCTGGGTTCATGTGGATCTAACAACATGTGCTACTCGAATTCTTCTCTTGAGCAGGTTCTGTGCCGCTGTTTGCCAGGTTTTTTGCCCACAGGTAATGATCAGAACAGTGGTAGAAATTTTACCGGAGACTGTGTTAGGCGAACTAACTTCCCTTGTGACGAGAAAAAGGAAAACGATGTTGCGTTTTCCAAGTTATCCGACATTGTTCCGCCGGCTAATAGAACTGAACAGGAAAAGATTGTGACCATGGAAAACTGTCAGTCCTTTTGCCGGAAAAATTGTTCGTGCAGCGGGTTTTCCTTCATCGTTTATAGCCAGCAGTGTCTGCTTTGGACCGGCGAGCTTTTAAATATGCAGACAGCGTCTGATGTAGATAGCAGTCTTTTTCTAGATTTCAATCTGAAAATTTCTGTTTCAGAGACGAATCCTGGAAACTCTCCGGAACCCGATCAAGATGACCGGACCAAAAAAATTGAAGCAACGAACAAGATTGAAGTTTGGGTCATCGCTGTGCTCACTTCTTCTCTAACACTCTTCGCTCTCGCACTTCTTCTGTATTATGCAAGAAAAAGGCTTCTACGTAAAGTAGGGGAAGATCTGCTACTTTTCGATCTAAACATGAATCCAAGAGACGATGAATCGGAGTTTTCTGAAACGTATGGAAAAGAAAGGTCGAACGAAGTGAAAATGCCGTTGTTCATCTTGTCGAGCGTGAGTGCTGCTACAGATAATTTCTCGGACGAGAATAAGCTCGGGGAGGGAGGGTTTGGACCAGTTTACAAGGGGAAGACACTGAGAGGGAACGAAATAGCAGTGAAAAGGCTGTCTCAAAAATCAAGCCAAGGATGGGAGGAGCTGAAAAATGAAGCTCTGCTCATAGCCAAACTTCAACACAAGAACCTTGTTAGACTTCTGGGGTGTTGCATAGAGGGAGACGAAAAGATACTGATTTACGAGTACATGCCCAACAAAAGCTTGGATTTTTTCCTCTTTGAAAGTTCAATCACTTATCTGAGCAGCTTTAGCTTTATCATCTGGGGAAATTTTGATGAAAACCCAGAGCGAAGGAAGATTTTGGATTGGCGAATGAGAGTTCGGATCATCGAAGGAATCGCCCAAGGGCTTCTATATCTCCATGAATACTCCAGGTTTAGAATTGTTCATCGAGATTTGAAAGTAAGCAACATTCTCTTAGACGCCGAAATGAACCCTAAAATAGCAGATTTCGGAATGGCCAGAATGTTCGGCGGCGACGAATCGGAGGCAAACACGAATCGGATCGTCGGAACTTTTGGTTACATGCCGCCGGAGTATGCTATGGAGGGCACTTTTTCGACAAAATCCGACGTGTTCAGCTTCGGAGTTTTGTTGTTGGAGATTGTTAGCGGCCGGAAAAATACTGGTTTCTATAGCAACAAGGGCAGCAATCTTCTCGGACATGCCTGGGATTTGTGGACAAGTGTAAAGGGTCTAAATTTGATAGATCCAGATTTAAAAGAAGTGACGTCTTCTCCGGTGGGACTGAGATATGTGAATATTGCTCTTCTCTGCGTTCAAGACAGCCCAGATGACAGACCCTCCATGTCTAACGTTGTCTCCATGCTTGGCAACGAAAGTATTGCCCTGTCTAAACCCAACCAACCTGGTTTCTTGAACATGAGAAGCGGAGCAACCTCTGTTTCCAGCAAGAGTCGGGTGGAGATATCTTCCGTGGTTGAAACTCCGATCGGAATGCCAGACCCTCGATGA 2244 44.3 MTYTVANTSAGPGAQARLLDSGNLIVQKGESRPLWQSFDNPTQTLLPGMNIGYDSRTNYSRYLQSWKRTLDPSPGNFTLRLDFLTLNLVVYNFSDQFWAHNSSQYLGSNFYVNRSLNSAYITWLPLPSNSSKLSRLVLDSKGLLLQKSWSESSLSWKSSNSSKCGLGSCGSNNMCYSNSSLEQVLCRCLPGFLPTGNDQNSGRNFTGDCVRRTNFPCDEKKENDVAFSKLSDIVPPANRTEQEKIVTMENCQSFCRKNCSCSGFSFIVYSQQCLLWTGELLNMQTASDVDSSLFLDFNLKISVSETNPGNSPEPDQDDRTKKIEATNKIEVWVIAVLTSSLTLFALALLLYYARKRLLRKVGEDLLLFDLNMNPRDDESEFSETYGKERSNEVKMPLFILSSVSAATDNFSDENKLGEGGFGPVYKGKTLRGNEIAVKRLSQKSSQGWEELKNEALLIAKLQHKNLVRLLGCCIEGDEKILIYEYMPNKSLDFFLFESSITYLSSFSFIIWGNFDENPERRKILDWRMRVRIIEGIAQGLLYLHEYSRFRIVHRDLKVSNILLDAEMNPKIADFGMARMFGGDESEANTNRIVGTFGYMPPEYAMEGTFSTKSDVFSFGVLLLEIVSGRKNTGFYSNKGSNLLGHAWDLWTSVKGLNLIDPDLKEVTSSPVGLRYVNIALLCVQDSPDDRPSMSNVVSMLGNESIALSKPNQPGFLNMRSGATSVSSKSRVEISSVVETPIGMPDPR 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24873821 24876629 - BLOR11794 Blo03g00613 58077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00613 747 ProSiteProfiles Protein kinase domain profile. 410 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00613 747 Pfam Protein tyrosine and serine/threonine kinase 413 700 IPR001245 GO:0004672|GO:0006468
Blo03g00613 747 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 727 - -
Blo03g00613 747 PIRSF SRK 2 745 IPR024171 GO:0004674
Blo03g00613 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Blo03g00613 747 CDD PAN_AP_plant 213 295 - -
Blo03g00613 747 SMART ntp_6 222 297 IPR003609 -
Blo03g00613 747 CDD STKc_IRAK 416 700 - -
Blo03g00613 747 ProSiteProfiles PAN/Apple domain profile. 217 299 IPR003609 -
Blo03g00613 747 SUPERFAMILY alpha-D-mannose-specific plant lectins 8 71 IPR036426 -
Blo03g00613 747 Pfam D-mannose binding lectin 7 67 IPR001480 -
Blo03g00613 747 SMART serkin_6 410 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo03g00613 747 Pfam PAN-like domain 222 283 IPR003609 -
Blo03g00613 747 Gene3D Phosphorylase Kinase; domain 1 384 485 - -
Blo03g00613 747 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 3 727 - -
Blo03g00613 747 SUPERFAMILY Protein kinase-like (PK-like) 386 700 IPR011009 -
Blo03g00613 747 Gene3D Transferase(Phosphotransferase) domain 1 510 711 - -
Blo03g00613 747 Pfam S-locus glycoprotein domain 104 194 IPR000858 GO:0048544
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00613 Blo-Chr3:24873821 Blo11g00306 Blo-Chr11:2472267 2.12E-167 dispersed
Blo03g00609 Blo-Chr3:24793628 Blo03g00613 Blo-Chr3:24873821 0 proximal
Blo03g00613 Blo-Chr3:24873821 Blo03g00614 Blo-Chr3:24889035 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84186 PF07714 PK_Tyr_Ser-Thr 3.60E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00613 - - qsu:112040619 651.358