Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00677 ATGAAGGTAAGCACTGGATCTGTCATCCGTATGTGCGATTGCAATAGTATAACGATAATATTTGGTATGCATCTTTCCTTCTCGACTTCTTTTTCTCGCTCCTTTAATGGATGGGAGGAAAAAGTCGGGCTGGGTACATCCGATACTGACTCCGGAAAAGGAAAGAGCAAGAAGTCAAAGAACATAACGCATGGATTTCACTTGGTCAAGGGAAAGTCACATCATGCCATGGAAGATTATGTCGTTGCAGAGTTCAAGCAAGTTGGTGATAAGGAACTCGGTTTATTCGCAATTTTTGACGGCCATTTGAGTCACAACATTCCTAACTATTTACAGACACATTTATTCGAGAATATCCTAAATGAGCCTGATTTTTGGACCAAACCAGCCAATGCAGTCAAGAAAGCATATAGCGAAACAGATGCAGTCATTCTGGACGAGGCAGTGGACTTAGGCAAAGGAGGATCTACTGCCGTTACGGCAATTCTGATCAATTGTCGTAAGCTGGTCGTAGCCAATATCGGAGATTCTCGTGCAGTTATCTGTACAAATGGGGTGGCCACTCAATTATCCATCGATCACGAGCCAAGCGTGGAAAAAGATAAGATCGAGAGTAGAGGGGGTTTCGTGTCGAACTTTCCAGGAGACGTAGCTCGAGTTGATGGGCAGCTTGCAGTGGCCAGAGCGTTTGGTGATAAAAGCTTGAAGAAACATCTGAGTTCTGACCCTGATGTGGTAGAGATAATGGTCGAGGACTGGACCGAGTTCATTATATTGGCAAGTGATGGATTATGGAAGGTGATGTCGAACCAGGAGGCAGCAGACTCGATCAAGCACATCAAGGATGCTCGAGCGGCAGCCAAGCAACTGACGGACGAGGCTCTGAAAAGGAAGAGCACGGATGACATTTCATTTGAATGGTTGTATTATCAAGAAGGGAAGGCTTCTCTCTTCCTCTTTGGAAAATTTCTAGCTCTCCTGTTTCAATTTCTTCAAAGTCTTATGGAGTTCAAGAGGTCTTTCTCTCTACTCTTCCTGCTTTTCATTTCCACTTTCTTTTCGTCTTCTAGAGCTTACAGATTCGACGTCGGTGGAAAGAGTGGGTGGACTGTCAACCCTCCTGAGAATTATGATCACTGGGCTGAAAGAAACAGATTCCAAATCAACGATGTTCTTTTTTTTAAGTATGAACGAGGGACAGATTCTGTTCTGGTAGTGAGTGAGGAGGATTATGAGAGTTGTAGTACGAAGAATCCGATTCTGAAACTTGATGATGGAAATTCTGAGTTTAAGTTTGAGAGGTCTGGCCCGTTTTACTTCATTAGTGGAAAAGAGGGGAACTGTGAAAAAGGTCAGAAATTGATCGTCGTTGTTTTAGCTTGGAGCAGTCCTTCTCCTCCATCCACGCCACCGTCCTCTTCATCTCCAAAAGTTCCAAAGCCTTCAATGTCAGCTCCGCCAAGTGCTCCTCCGAGTTCGCCCTTTCCAACGCCTCATGCTCCTCCTTCTGGTTCCCGAGGTTCACCGTCCTCGCCATCTCCTGTAGCTGGGGGATCCCCACCACCGTCCCCGAAGTTTCAAACTCCAACTTCGAAGCCACCATCTCCTGCTGCTAAAGGCCCAAGTTCATCTCCGAAGTCTCCTTCTACGGCTTCTGGAGGCCCGAGATCATCTCCAACGTCTCCATCTCCGACTTCTGGAGGCCCAAATTCATCTCCAATGTCTCCATCTCCGGCTTCTGGAGGCCCAAGTTCATCTTCGACGTCTCCATCACCAACAGTTGGAAGCCCAAGCACATCCCCAGTGACTTCATCTCCAACTATCGGAGGTCCAAAATCATCTCCAATAATTCCATCTCCAACTACTGGAGGCCCAAGTTCATCTCCGACAACTCCATCTCCAACTTCAGGTGGCCCAAGATCATCTCCGACGTCTCCATCTCCTGCTTATGGAGGCCCAAATGCATCTCCAAAGTCTTCATCTCCGACATCTGGAGGCCCAACTAGAAGCCCAAGCACATCTCCAACGACTTCATCTCCCACTACCGGAGGCCCAAAATCATCTCCAACGACTCCATCTCCAGCTACTAGAGGCCCAAGTTCTTCTCCTACGACTCCATCTCCAACTTCAGGAGGCCTAAAATCATCTCCTACGACTCCATCTCCAACTTCAGGAGGCCCAAGATCATCTCCAACGTCTCCATCTCCTGCTTATGGAGGCGCAAATGCATCTCCAAAGTCTTCATCTCCGACATTTGGAGGCCCAAGTTCATCTTCAATGTCTCCATCACCAATTGCTGGAAGCCCAAGGACATCTCCAACGACTTCATCTCCCACTACCGGAGGCCCAAAATCATCTCCAACGATTCCATCTCCATCTACTAGAGGCCCGAGTTCTTCTCCTACGACTCCATCTCCAACTTCAGGAGGCCCAAAATCATCTCCGACGACTCCATCTCCAACTACAGGAGGCCCAAGATCATCTACGACGTCTCCATCTCCGGCTTATGGAGGCCCAAATTCATCTCCAAAGTCTTCATCTCCGACATCTGGAGGCCCAAGTTCATCTTCGACGTCTCCATCACCAATTGCTGGAAGCCCAAGGACATCTCCAACGACTTCATCTCCCACTACCGGAGGCCCAAAATCATCTCCAACAATTCCATCTCCAGCTACTAGAGGCCCGAGTTCTTCTCCTACGACTCCATCTCCAACTTCAGGAGGCCCAAAATCATCTCCGACGACTCCATCTCCGACGACTCTATCTCCAACTATAGGAGGCCCAAGATCATCTTCGACGTCTCCATCTCCGGCTTATGGAGGCCCAAATGCATCTCCAAAGTCTTCATCTCCAACTTCTGGAGGCCCAAGTTCACCTTCGACATCTCCATCACCAATTGTTGGAAGCCCAAGCACATCTCCAACAAAGTCATCTCCCACTACCAGAGGCCCAAAATCATCTCCATTGACTCCATCTCCAACTCCTATAAGCCCAAGTTCATCTTCGACGACTCCATCTCCAACTTCAGGAGGCCCAAGATCTTCTCCAACGTCTCCATCTCCCACTTATGGAGGCTCAAATTCATCTCCAACATTTGCATCTCCAGCTTCTGGAAGCCCAAGTTCATCTTCGACATCTCCATCTCCATCTCTAGCTATCGGAGGCCCAAAATCATCTCCAATGACTCCATCTCCAGCTACTAGAGGCCCGAGTTCTTCTCCGACGACTCCATCTCCAACTTCAGGAGGCCCAAAATCATCTCTGACGTCTCCATCTCCTACTTATGGAGGCCCAAATTCATCTCCAACGTCTCCATCTCCGGCTTTTGGAGGCCCAAGTTCATCTTCGACGACTCCATCTCCAACTATCGGAGGCCCAAGCTCATCTCCAATGACCCCATCTCCAGCTACAGGAGGCCCAAAATCATCTCCAACAACTCCATCTCCAGCTACTAGAGGCCCAAGATCATCTCTGACGTCTCCATCTCCCTCTTCAGAAGGCCCAAATTCATCTCCAATGTCTCCATCTCCAACTTCTGGTGCCCCAAGTTCTTCTCCGATATCTTCATCACAAGATACTGAAGGCCCAAGTTCATCTCAAACGTCTCCCTCTCCAACTGTTGGAGGCCCAAGCTCATCTTCATATGCTGGAGGCCCAAGTTTGTCCGTTACGTCTCCATCTCCATCTTTTGGAGGCCCAAGCTCATTTTTGGCACATTCACCGTCGCCATCGTTTTCAGCTACATCACCATCATCAACGAATGAGACAAGTTCATCTCCATTGGAATCAAGACAATCTCCTCCTAGATCTAGCGACTTGCCCAGTGGTCACCGTCGGGTGCTTTACTGTACGGTTTGCTTTGCGACCTCGCCCATGGGGAAGAAGGAGAAGAGGGGTAAAGTGATTGTCATATCTGGTCCCACTGGTGCTGGAAAGAGCAGGCTTGCTCTGGAGCTTGCCAAGCTTCTCGGCGGCGAAATTATTAGTGCCGACTCCGTTCAGGTATATAAGGGGCTTGATGTTGGATCTGCAAAGCCTCCTTTAAGCCACCAACGGGAGGTTCCACATCATCTAATTGACATATTGCATCCTTCTGAAGACTATTCTGTTGGACAATATTTTGAGGATGCGAGACAGGCAACTGATTCTATTCTGCAGAATGGTCATGTGCCAATAGTTACTGGTGGGACTGGATTATACTTGAGATGGTTCATGTATGGCAAGCCAAATGTTCCAAAGGCATCTCCTGAGATCGCATCACAAGTTTGTTCAGAATTAGCTGACTTACAGAGAGACGAAGACTGGGATGGAGCTGTGCAGTTGGTTGTCAAAGCGGGGGATCCAAACGCTCAATTTATTGCTATGAATGATTGGTATAGACTACAACGCAGCCTTGAAATTATCAAGTCTAGTGGATCACCTCCATCTGCGTTTCAAGTGCCATATGAGTCTTTCAAGGGGCAATGTGATTTGAGCACGACAGGTAGCAGCAATGATGCCGTCTCTTCGATTGATGAACTGGATAAATTGAAATCAAAGGAGTTGGACTATGACTTCATTTGCTTTTTCCTCTCTAGCCGAAGACTTGACTTGTATAAACTAATTGACGATCGCTGTGAAGATATGCTTTCAGGAAGTGATGGGATTTTATCCGAGGCCAAATGGCTTTTAGATTCAGGTCTTCTTCCAAATTCAAATTCTGCAACCCGAGCTATTGGTTATAGACATGCTATGGAATACTTGCTAAGATGTAGGCAGAACGGTGGAAGTTCTCCAGGAGAGTTTTTTGCTTTTTTATCAGAATTTCAGAAAGCATCTAGAAACTTTGCTAAGAGGCAGTTGACATGGTTCCGCAATGAGCAAATATATCATTGGCTTGATGCATCTAAACCCATGGAAACAGTCCTTCAGTTCATCTGCGAGGCATACAATGATCAAAGTGGGAATTTGACCATCCCCGAATACCTTAGAATGAAGAAAAATGTTTCAAACCGCCGCGAAGTTTCAGACCTGAAGGCTTATCGTACAAGAAATAGGCATTTTGTGCAACGCCAAGATTGCTTCGACATTTTAGATTGGATCAATCAAGTTCAAAGTGATCAATCTCTCGAACTAAGCTCGATGTCAACATTTCAGAAATGA 5142 47.16 MKVSTGSVIRMCDCNSITIIFGMHLSFSTSFSRSFNGWEEKVGLGTSDTDSGKGKSKKSKNITHGFHLVKGKSHHAMEDYVVAEFKQVGDKELGLFAIFDGHLSHNIPNYLQTHLFENILNEPDFWTKPANAVKKAYSETDAVILDEAVDLGKGGSTAVTAILINCRKLVVANIGDSRAVICTNGVATQLSIDHEPSVEKDKIESRGGFVSNFPGDVARVDGQLAVARAFGDKSLKKHLSSDPDVVEIMVEDWTEFIILASDGLWKVMSNQEAADSIKHIKDARAAAKQLTDEALKRKSTDDISFEWLYYQEGKASLFLFGKFLALLFQFLQSLMEFKRSFSLLFLLFISTFFSSSRAYRFDVGGKSGWTVNPPENYDHWAERNRFQINDVLFFKYERGTDSVLVVSEEDYESCSTKNPILKLDDGNSEFKFERSGPFYFISGKEGNCEKGQKLIVVVLAWSSPSPPSTPPSSSSPKVPKPSMSAPPSAPPSSPFPTPHAPPSGSRGSPSSPSPVAGGSPPPSPKFQTPTSKPPSPAAKGPSSSPKSPSTASGGPRSSPTSPSPTSGGPNSSPMSPSPASGGPSSSSTSPSPTVGSPSTSPVTSSPTIGGPKSSPIIPSPTTGGPSSSPTTPSPTSGGPRSSPTSPSPAYGGPNASPKSSSPTSGGPTRSPSTSPTTSSPTTGGPKSSPTTPSPATRGPSSSPTTPSPTSGGLKSSPTTPSPTSGGPRSSPTSPSPAYGGANASPKSSSPTFGGPSSSSMSPSPIAGSPRTSPTTSSPTTGGPKSSPTIPSPSTRGPSSSPTTPSPTSGGPKSSPTTPSPTTGGPRSSTTSPSPAYGGPNSSPKSSSPTSGGPSSSSTSPSPIAGSPRTSPTTSSPTTGGPKSSPTIPSPATRGPSSSPTTPSPTSGGPKSSPTTPSPTTLSPTIGGPRSSSTSPSPAYGGPNASPKSSSPTSGGPSSPSTSPSPIVGSPSTSPTKSSPTTRGPKSSPLTPSPTPISPSSSSTTPSPTSGGPRSSPTSPSPTYGGSNSSPTFASPASGSPSSSSTSPSPSLAIGGPKSSPMTPSPATRGPSSSPTTPSPTSGGPKSSLTSPSPTYGGPNSSPTSPSPAFGGPSSSSTTPSPTIGGPSSSPMTPSPATGGPKSSPTTPSPATRGPRSSLTSPSPSSEGPNSSPMSPSPTSGAPSSSPISSSQDTEGPSSSQTSPSPTVGGPSSSSYAGGPSLSVTSPSPSFGGPSSFLAHSPSPSFSATSPSSTNETSSSPLESRQSPPRSSDLPSGHRRVLYCTVCFATSPMGKKEKRGKVIVISGPTGAGKSRLALELAKLLGGEIISADSVQVYKGLDVGSAKPPLSHQREVPHHLIDILHPSEDYSVGQYFEDARQATDSILQNGHVPIVTGGTGLYLRWFMYGKPNVPKASPEIASQVCSELADLQRDEDWDGAVQLVVKAGDPNAQFIAMNDWYRLQRSLEIIKSSGSPPSAFQVPYESFKGQCDLSTTGSSNDAVSSIDELDKLKSKELDYDFICFFLSSRRLDLYKLIDDRCEDMLSGSDGILSEAKWLLDSGLLPNSNSATRAIGYRHAMEYLLRCRQNGGSSPGEFFAFLSEFQKASRNFAKRQLTWFRNEQIYHWLDASKPMETVLQFICEAYNDQSGNLTIPEYLRMKKNVSNRREVSDLKAYRTRNRHFVQRQDCFDILDWINQVQSDQSLELSSMSTFQK 1713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28471536 28485510 + BLOR11858 Blo03g00677 58141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00677 1713 Gene3D - 1410 1480 - -
Blo03g00677 1713 SUPERFAMILY Cupredoxins 358 459 IPR008972 -
Blo03g00677 1713 MobiDBLite consensus disorder prediction 463 1275 - -
Blo03g00677 1713 MobiDBLite consensus disorder prediction 542 985 - -
Blo03g00677 1713 Pfam Plastocyanin-like domain 369 452 IPR003245 GO:0009055
Blo03g00677 1713 MobiDBLite consensus disorder prediction 464 541 - -
Blo03g00677 1713 SMART PP2C_4 53 1303 IPR001932 -
Blo03g00677 1713 Hamap tRNA dimethylallyltransferase [miaA]. 1301 1637 IPR018022 GO:0008033
Blo03g00677 1713 MobiDBLite consensus disorder prediction 1001 1272 - -
Blo03g00677 1713 TIGRFAM miaA: tRNA dimethylallyltransferase 1301 1479 IPR018022 GO:0008033
Blo03g00677 1713 PRINTS Proline rich extensin signature 479 491 - -
Blo03g00677 1713 PRINTS Proline rich extensin signature 518 534 - -
Blo03g00677 1713 PRINTS Proline rich extensin signature 548 573 - -
Blo03g00677 1713 PRINTS Proline rich extensin signature 459 475 - -
Blo03g00677 1713 PRINTS Proline rich extensin signature 491 512 - -
Blo03g00677 1713 MobiDBLite consensus disorder prediction 986 1000 - -
Blo03g00677 1713 Gene3D - 1299 1680 IPR027417 -
Blo03g00677 1713 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 1291 1697 - -
Blo03g00677 1713 CDD OsENODL1_like 359 459 IPR041846 -
Blo03g00677 1713 Pfam Protein phosphatase 2C 74 303 IPR001932 -
Blo03g00677 1713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1301 1431 IPR027417 -
Blo03g00677 1713 ProSiteProfiles Phytocyanin domain profile. 359 460 IPR003245 GO:0009055
Blo03g00677 1713 SUPERFAMILY PP2C-like 60 304 IPR036457 -
Blo03g00677 1713 ProSiteProfiles PPM-type phosphatase domain profile. 63 310 IPR001932 -
Blo03g00677 1713 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1291 1697 IPR039657 -
Blo03g00677 1713 CDD PP2Cc 70 304 IPR001932 -
Blo03g00677 1713 Gene3D - 45 312 IPR036457 -
Blo03g00677 1713 Gene3D - 357 463 IPR008972 -
Blo03g00677 1713 Pfam IPP transferase 1334 1620 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00069 Blo-Chr2:468399 Blo03g00677 Blo-Chr3:28471536 4.58E-42 dispersed
Blo03g00677 Blo-Chr3:28471536 Blo14g00764 Blo-Chr14:22841536 3.08E-94 dispersed
Blo05g00377 Blo-Chr5:4527118 Blo03g00677 Blo-Chr3:28471536 6.19E-16 dispersed
Blo07g00204 Blo-Chr7:2583703 Blo03g00677 Blo-Chr3:28471536 2.70E-21 dispersed
Blo16g01068 Blo-Chr16:39238493 Blo03g00677 Blo-Chr3:28471536 9.16E-15 dispersed
Blo17g00316 Blo-Chr17:3319782 Blo03g00677 Blo-Chr3:28471536 5.24E-27 dispersed
Blo19g00144 Blo-Chr19:5015876 Blo03g00677 Blo-Chr3:28471536 4.89E-20 dispersed
Blo03g00677 Blo-Chr3:28471536 Blo11g00033 Blo-Chr11:266677 1.04E-88 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00677 K00791 - jre:109012517 647.891