Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00701 ATGCCTGGGAACAAGTACAACGGTAATAATCACATTCAAGCAAGTCGAGTGGCAAGGCTAGTGAGGGAAAGAGAACTAAGAAAAAGCAGCAGAGCTTCACATTCTAACGAGTCAAATGATAACAATAGAGAAGCTGACTTAATTGAGCGTAACCAGCGACTGAGAGAAGAAGATAACTCTGGCATTTCATGCTTTGAAAAATTCTCGGAATCGTCAGCACCTAATCGGGCTTTTACTGAGGGATGTGAACGGCAAGATGTGAAGCCTCTTAGACAAAGACTGCTGGTTGTGGCTAACAGGCTGCCAGTTTCTGCAGTTAGGAGAGGAGAAGACTCCTGGTCTCTGGAGATAAGCGCTGGGGGTCTAGTCACTGCACTTCTAGGTGTGAAGGAGTTTGAAGCAAGATGGATTGGTTGGGCAGGAGTAAATGTGCCAGATGCGATTGGGCAAAAGGCACTCACTAAAGCTTTAGCTGAGAAGAGCTGTATCCCAGTTTTCCTGGATGAAGAAATTGTTCATCAATATTACAATGGCTACTGCAACAATATTTTATGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTCGCCACCACTCGTAGTTTTCAGTCTCAGTTTGCAGCATATAAGAAGGCAAATCAAATGTTTGCTGATGTGGTTAACATGCACTATGAAAAGGGTGACGTTGTTTGGTGCCATGATTATCATCTTATGTTTCTTCCAAAATGTCTTAAGGAACATAACAGCAAGATGAAAGTTGGATGGTTTCTTCACACTCCATTTCCTTCTTCTGAAATTCACAGGACGCTGCCATCTCGATCTGAGCTGCTGCTTTCTGTACTAGCAGCTGATTTAGTAGGTTTTCATACTTATGACTATGCCCGCCATTTTGTAAGTGCTTGTACACGTATTCTTGGTCTTGAGGGTACACCAGAAGGCGTTGAGGATCAAGGGAAGCTGACTCGAGTTGCTGCATTTCCCATTGGAATAGACTCGGATCGTTTTACTCGTGCCCTTGAGGTTCACGAGGTCCAGGAACATATCAAAGAGTTAAAAGAAAGATTTAAAGGTCGAAAGGTAATGTTAGGTGTCGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAGATACTAGCATTTGAAAAATTTTTGGAAGAAAATCCTATTTGGCGTGATAAAGTAGTTCTTTTGCAAATTGCTGTACCTACAAGAACAGATGTTCCCGAGTATCAAAAATTAACAAGTCAGGTTCATGAAATTGTTGGACGCATAAATGGACGATTTGGCTCCTTGACAACTGTTCCCATTCATCATCTGGATCGTTCACTTGATTTCTATGCCTTATGTGCTTTGTACGCTGTCACTGATGTAGCAATAGTCACATCTTTAAGGGATGGAATGAATCTAGTCAGCTACGAGTTTGTGGCTTGCCAAGATGCAAAGAAAGGTGTCCTCATTCTAAGTGAGTTTGCTGGCGCAGCCCAGTCCTTAGGGGCTGGCGCACTTCTAGTGAACCCTTGGAACATAACCGAAGTTGCAAAATCAATTGACCGTGCTTTAAATATGACTGCTGAAGAGAGAGAGAAACGTCACAGGCATAATTTTGCTCATGTGACAACACACACTGCTCAGGAGTGGGCTGAAACTTTTGTGAGTGAATTGAATGATACTGTTGTTGAAGCTGAACTAAGAACAAGACAAGTTCCGCCCTGTCTTCCTTTTGAGGATGCAATAAAACATTATTCGAGGTCAAATAATCGATTACTCATATTGGGATTTAATTCAACGTTAACTGAACCTGTGGACACACCTGAGAGAAGAGGTGATCAAATAAGAGAAATGGAATTGAAATTGCACCCAGACTTAAAAGAGTCGTTGACCACTCTCTGCCGCAATACAAAGACAACAATTGTCATCCTTAGTGGGAGTGACAGAACAATCTTAGATGATAACTTTGGAAACTATGACATGTGGTTGGCGGCTGAAAATGGGATGTTTTTGCGATTTACTAAGGGAGATTGGATGACTACAATGCCCGAACATTTGAATATGGAATGGGTCGACAGTGTGAAGCATGTTTTCGAGTATTTCACAGAACGAACACCCCGTTCACATTTTGAACCACGAGAAACTTCACTTGTGTGGAATTATAAATACGCAGATGTTGAATTTGGGAGACTTCAAGCAAGGGATATGTTGCAGCACCTCTGTACAGGCCCCATTTCCAATGCATCTGTCGATGTTGTCCAAGGCAGTCGATCCGTAGAGGTACGAGCAGTTGGCGTTACAAAGGGTGCAGCTATTGACCGTATATTAGGAGAGATTGTTCACAGTAAATCCATGACAACTCCAATAGACTATGTCTTATGCATTGGGCATTTTCTTGGGAAGGATGAGGATGTATACACTTTCTTTGAGCCTGAGCTTCCTTCTGATACCATAGGCATAGGAAGGACCAAGGCAATGGATGGACTTAAGCTATCTAACGAGAGAAGATCTGCTTTGAAGCTCTCACCAAACAGGAATGCCTCAAAATCATCTCACGCTACTAAGGCAAGGCATTTGCCGAATTCCGAGAGGAAAACTCCGGCCAACCACCTGTGCGGAAACGGAAAGAAGCAGTCGCCGGAGAAGATTCAGTGGAATGTGCTTGATCTCAAAGCTGAGAATTACTTCTCATGTGCTGTTGGGCGGACCCGCACAAGTGCTCGATATCTACTCGGATCGTCCGATGATGTCGTCTCGTTTCTCAAGGAGCTTTCTAATGCAGCATTACCTGACTCTTAA 2796 43.06 MPGNKYNGNNHIQASRVARLVRERELRKSSRASHSNESNDNNREADLIERNQRLREEDNSGISCFEKFSESSAPNRAFTEGCERQDVKPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVTALLGVKEFEARWIGWAGVNVPDAIGQKALTKALAEKSCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNMHYEKGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLLSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFTRALEVHEVQEHIKELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPIWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFYALCALYAVTDVAIVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMTAEEREKRHRHNFAHVTTHTAQEWAETFVSELNDTVVEAELRTRQVPPCLPFEDAIKHYSRSNNRLLILGFNSTLTEPVDTPERRGDQIREMELKLHPDLKESLTTLCRNTKTTIVILSGSDRTILDDNFGNYDMWLAAENGMFLRFTKGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFEPRETSLVWNYKYADVEFGRLQARDMLQHLCTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDTIGIGRTKAMDGLKLSNERRSALKLSPNRNASKSSHATKARHLPNSERKTPANHLCGNGKKQSPEKIQWNVLDLKAENYFSCAVGRTRTSARYLLGSSDDVVSFLKELSNAALPDS 931
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29737290 29748866 - BLOR11882 Blo03g00701 58165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00701 931 MobiDBLite consensus disorder prediction 23 46 - -
Blo03g00701 931 SUPERFAMILY HAD-like 590 923 IPR036412 -
Blo03g00701 931 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 92 561 - -
Blo03g00701 931 Gene3D Glycogen Phosphorylase B; 82 332 - -
Blo03g00701 931 Gene3D - 617 796 IPR023214 -
Blo03g00701 931 Pfam Glycosyltransferase family 20 93 558 IPR001830 GO:0003824|GO:0005992
Blo03g00701 931 MobiDBLite consensus disorder prediction 836 877 - -
Blo03g00701 931 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 924 IPR001830 GO:0003824|GO:0005992
Blo03g00701 931 CDD HAD_TPP 591 824 - -
Blo03g00701 931 CDD GT20_TPS 93 558 IPR001830 GO:0003824|GO:0005992
Blo03g00701 931 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 924 - -
Blo03g00701 931 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 93 558 IPR012766 GO:0003825|GO:0005992
Blo03g00701 931 Gene3D Glycogen Phosphorylase B; 335 542 - -
Blo03g00701 931 MobiDBLite consensus disorder prediction 836 854 - -
Blo03g00701 931 Pfam Trehalose-phosphatase 616 833 IPR003337 GO:0003824|GO:0005992
Blo03g00701 931 Gene3D - 683 763 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00701 Blo-Chr3:29737290 Blo02g00987 Blo-Chr2:38195620 1.65E-146 dispersed
Blo03g00692 Blo-Chr3:29121344 Blo03g00701 Blo-Chr3:29737290 0 proximal
Blo01g00886 Blo-Chr1:17628806 Blo03g00701 Blo-Chr3:29737290 0 transposed
Blo01g00884 Blo-Chr1:17607680 Blo03g00701 Blo-Chr3:29737290 0 wgd
Blo19g00010 Blo-Chr19:157188 Blo03g00701 Blo-Chr3:29737290 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00701 K16055 - csv:101204478 1610.89