Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00713 ATGGACACCCATTTCCATGGTCTACCTCCTCTCAAACGGTTCCGCATTCTGCAACATCAGCCAGAAGAATTTAACAGAGAGCAAAGATCGGAACTAGGGCGAGCAGATAGCTACGTCGAGTCGCTTTCCCTTCCGGCGAAGAAGCGAAAAGAGTCTCGAGAATCGAATCCTGCGGATTCTGCCGCCGCCAGAACTGCAGCTCGAACCTCCACTTATTTCCTTCCAGCGAAAAAAAGGATATGGGCCGTTCAGCCAGATTTCGCACTCGAACATGGTTATTTACCATTTGATCTTAATATGGAATATCAACCACAAAAGGAGGAAGAATTGGAAAAAATATCAGGAAAAGAGCCTAGTGATGAGAAAGAAGAAAAGAAAACCCCATCTCTGGGCGATGAAATTGAAGACATCGATCGAATCAATGAATGTAAAGAATATGAAAAGGAAGCAAGCGAGGAAGAAGAAGATGATGGAATTCTCTGTGCAGTTTGTCAAAGCACAGACGGGGATCCATCAGATCCAATTGTCTTCTGTGATGGCTGCGATCTAATGGTCCACGCTTCGTGTTATGGAAATCCATTACTGAAACAAATACCAGAAGGGGAATGGTTTTGTGCCCAATGCTCATCTTCACCTAAAGCTTCTGAAAATGGCGTCTCTTGCAGCCTCTGCCCAACCAAGGGAGGAGCGATGAAGCCAATGAAAGACGGCGCATGGGCTCACATCGTGTGCGTCCTCTTTGTACCAGAGGCCTTCTTTGAGGATCCAGAAGGGCGAGAAGAGATCAATTGCTCGGCGATTCCGCAAAAGAGGTGGAAGCAGAAATGCTACATCTGTAAAAATGGGAGTGGGTGTGCTATTGATTGCTCTGAGCCAAAATGTAGTTTGTCTTTTCATGTTACTTGTGGGTTGAATGAAGATCTTTGCATAGAATACCGAGAGGGGAAGAGAAAGGGTGCTGTTGTTGCTGGTTTCTGCAAACAGCATTCTGAACTTTGGATGAAGATCAGAGCGACGGACTTTTGTGATTTTCTCGATCGTAGATCAAACCCACGTGTTGTCTTTCCCATCTTCCCGAACACTATAAATACTCCATCTAGTTCTCAACATTATATCACCAAAATCATTCAAAGCCTTCACTTTCCCGTTTTCCAACTAAGCAAGAGATTTTTCTTCGTTACAGCAATCATGTCGAAGACATCAATCATTGGTGGAAGTTTGAGCTTCGTCTGGTTATTAATGGCGGTTCTTTCTGCAGCTCAAAACCCCGCCGTACTAGACACCGACGGCCAAGCTCTTCAAGCGGGCGTCGAGTACTACATCAGACCGGCTATCACGGACTCTGGCGGTCGCTTCACTTTGATTGACAGGAATAACTCTTGCCCTTTGTACGTCGGGCAAGAGAACGTCGACGGTCCGCCAGGTATCCCGGTGATCTTCACGCCATTCGCGGAGGGAGAGACGGTGGTCAGAGAGCAGAGGGATTTCAAGATCGTGTTCTCAGCTGGAACAATATGTGTCCAGTCGACGGCGTGGAGGGTCGGAGAAGTAGATTCAAGAACTCAGAGGAGACTGATCAGGGCAGGAGAGTCGGCAGGTATAAGCGCTTCTAACTATTTCAGGATCGTCAAGAACGAAGCCAATGGCCAGTATAATTTCAATTGGTGCCCAACTGAAGTTTGTCCGTTATGTCGTTTTAACTGTGGGTCCCTTGGTTCTATTGTCGAAAATGGACGGAGGCTGTCGGCTTTGGATGGATCGGTGCTTCCTGTTATATTTCAGAAGGCTTAA 1791 46.68 MDTHFHGLPPLKRFRILQHQPEEFNREQRSELGRADSYVESLSLPAKKRKESRESNPADSAAARTAARTSTYFLPAKKRIWAVQPDFALEHGYLPFDLNMEYQPQKEEELEKISGKEPSDEKEEKKTPSLGDEIEDIDRINECKEYEKEASEEEEDDGILCAVCQSTDGDPSDPIVFCDGCDLMVHASCYGNPLLKQIPEGEWFCAQCSSSPKASENGVSCSLCPTKGGAMKPMKDGAWAHIVCVLFVPEAFFEDPEGREEINCSAIPQKRWKQKCYICKNGSGCAIDCSEPKCSLSFHVTCGLNEDLCIEYREGKRKGAVVAGFCKQHSELWMKIRATDFCDFLDRRSNPRVVFPIFPNTINTPSSSQHYITKIIQSLHFPVFQLSKRFFFVTAIMSKTSIIGGSLSFVWLLMAVLSAAQNPAVLDTDGQALQAGVEYYIRPAITDSGGRFTLIDRNNSCPLYVGQENVDGPPGIPVIFTPFAEGETVVREQRDFKIVFSAGTICVQSTAWRVGEVDSRTQRRLIRAGESAGISASNYFRIVKNEANGQYNFNWCPTEVCPLCRFNCGSLGSIVENGRRLSALDGSVLPVIFQKA 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30126542 30131002 + BLOR11894 Blo03g00713 58177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00713 596 CDD PHD_BRPF_JADE_like 160 208 - -
Blo03g00713 596 PANTHER PHD FINGER PROTEINS 139 335 - -
Blo03g00713 596 ProSitePatterns Soybean trypsin inhibitor (Kunitz) protease inhibitors family signature. 425 441 IPR002160 GO:0004866
Blo03g00713 596 ProSiteProfiles Extended PHD (ePHD) domain profile. 218 330 IPR034732 -
Blo03g00713 596 ProSitePatterns Zinc finger PHD-type signature. 161 208 IPR019786 -
Blo03g00713 596 SMART kul_2 424 596 IPR002160 GO:0004866
Blo03g00713 596 MobiDBLite consensus disorder prediction 19 65 - -
Blo03g00713 596 Pfam Trypsin and protease inhibitor 425 595 IPR002160 GO:0004866
Blo03g00713 596 Pfam PHD-finger 161 210 IPR019787 -
Blo03g00713 596 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 116 - -
Blo03g00713 596 SMART PHD_3 275 330 IPR001965 -
Blo03g00713 596 SMART PHD_3 160 209 IPR001965 -
Blo03g00713 596 MobiDBLite consensus disorder prediction 106 130 - -
Blo03g00713 596 Gene3D - 417 596 - -
Blo03g00713 596 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 461 481 IPR002160 GO:0004866
Blo03g00713 596 PRINTS Soybean trypsin inhibitor (Kunitz-type) signature 424 453 IPR002160 GO:0004866
Blo03g00713 596 CDD ePHD 221 329 - -
Blo03g00713 596 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 214 IPR013083 -
Blo03g00713 596 Pfam PHD-zinc-finger like domain 220 329 - -
Blo03g00713 596 CDD STI 424 595 IPR002160 GO:0004866
Blo03g00713 596 SUPERFAMILY STI-like 421 596 IPR011065 -
Blo03g00713 596 PANTHER PHD FINGER PROTEINS 2 116 - -
Blo03g00713 596 MobiDBLite consensus disorder prediction 43 57 - -
Blo03g00713 596 MobiDBLite consensus disorder prediction 19 34 - -
Blo03g00713 596 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 139 335 - -
Blo03g00713 596 ProSiteProfiles Zinc finger PHD-type profile. 158 211 IPR019787 -
Blo03g00713 596 SUPERFAMILY FYVE/PHD zinc finger 147 224 IPR011011 -
Blo03g00713 596 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 332 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00713 Blo-Chr3:30126542 Blo03g00715 Blo-Chr3:30177388 1.28E-125 dispersed
Blo03g00713 Blo-Chr3:30126542 Blo03g00714 Blo-Chr3:30135676 9.92E-117 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12124 PF00197 Kunitz_legume 6.20E-40 CL0066 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00713 K11380 - csv:101203744 410.994