Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00730 ATGGAGAATATAGCTTCGCAGAGCATTATTCTTCCCATCATACCTTGGTTCTTGGAGAAGTACAAACCATGGACTGCCAAGAAAGCTTTGGTTCAGCATCTTTACTTGGGAAGAAATCCTCCTATGTTCACAGAGATGAGAGTTCTAAGCGAATCATCTGAAGATGATCACTTGATACTAGAGCTGGGAATGAATTTTCTCACGGCTGATGACATGAGTGCCATACTGGCTGTAAAGCTACGAAAAAGACTTGGATTTGGAATGTGGGCTAAGCTGCATTTAACAGGCATGCATGTAGAAGGGAAGGTGTTGGTCGGGGTGAAATTCCTTCAAACATGGCCGTTTGTGAGTCGTCTAAGGTTATGTTTTGCTGAGCCTCCGTACTTTCAAGTGACTGTGAGGCCTATCTCTACACATGGACTTGATGTAACAGTTCTTCCGGGGATTGCAGGGTGGCTAGATAAGCTTCTGTCCATTGCATTTGAACAGACTCTCGTTGAGCCCAATATGCTAGTTGTTGACATGGTGAAATTTGTTTCCCCGCATCCAGCCGAAAGTTGGTTCTCTGTGGACGTGAAGGAACCAGTTGCTTATGCTAAATTAGAAGTAATTGAAGCAAGTGATATGATACCATCGGATCTAAATGGATTGGCAGATCCATACGTGAAAGGTCAATTAGGACTCTACAGATTCAAGACTAAGATTCAAAAGAAAACGCTATTTCCAAAATGGCAAGAGGAATTCAATATTCCTATTGTTTCATGGGAATCAGAAAATGTGCTGGCTATTGAAGTTCTTGACAAGGACCATTTTTCAGATGATCTGCTTGGAGTCTGTTCCATTAACATTACTGATAAGCGGGATGGCCAGCGACACGACATGTGGTTGCCTCTTCAAAAGGTTAAGACTGGGAGATTGCATATTGTAGTCACGATATTCGAAGAAAATGGAGAGGTCGATAATCAACGTAACAACAAACCAGAAGTTGATATGTTTGAGCCTCAAAAGGGCGGTGGTCCGGTACTGGCTGTTTCTTCTAAAAAAGCTCAGATAGTTGCCGATAATTTGAAACCCATCAACATCGAAGGGCAAAAAGAGACTGGAATATGGGTCCATCAACCGGGAAGTGAAATCTCGAAGACTTGGGAACCGAGAAAAGGGAAGAACCAACAACTTGACACTGAGGTTGAAGGGAAGGCTAATGATTCCATTACAATTACTGCTCAATCGGGAACGCTCAAAGATAGCAACAGCAGTGGAGATGAAAATCCAGAGGAAAAACATAGAATGAAACCCATTCGGAGGGGATTGAGGAAGATAAGTTCTATTTTCCACAGGAGTCCGAAAAAAGATGAACATGTTATGAGTTTAGTCCAGTCCGTTCAATCCCCATATTCAAATATTAGAGCAGTTAATGCAAAAGGAGGAGGAGGAGTTAAGCTTATTGTCGAAGAAAAGGTGGTTATAGAAGAGAAAATTACTGTTTCTGGTCTGGATAAGGTAGCAAAAGTGGGAAAGACAAGTAGTGAAGAAAGTGATCCAGATAATCCAAGTAAGGGTGATGCAAAAGCCAAGTCTAGGAACATTTTCCGACACGTGTTTTCGCGGAAAAGGTGTAGAAGCTTACCGGGCCATTCTTCCAGAACGAAGGGAAGAGATGTATTAGTGGATTCTGACTTGTCTGAAGAAGATGAAAATGTGTCATCCTCCCCTCGCCCGCGCCCTCCTAAAGTTGAAGAGATTACAAATGTTTCTGAATCTCTGGCCAATGACTCGTCGGACGCGAAAGAGCAAGTGATCGAACCGAATTCAAACCGAACAAGCGAGGGGAGTAGTGATGGATTTGAAAAGATTGATTACAAAGACAAAAACAGCCCTGATAAACATGTTGACAAGTAG 1899 42.5 MENIASQSIILPIIPWFLEKYKPWTAKKALVQHLYLGRNPPMFTEMRVLSESSEDDHLILELGMNFLTADDMSAILAVKLRKRLGFGMWAKLHLTGMHVEGKVLVGVKFLQTWPFVSRLRLCFAEPPYFQVTVRPISTHGLDVTVLPGIAGWLDKLLSIAFEQTLVEPNMLVVDMVKFVSPHPAESWFSVDVKEPVAYAKLEVIEASDMIPSDLNGLADPYVKGQLGLYRFKTKIQKKTLFPKWQEEFNIPIVSWESENVLAIEVLDKDHFSDDLLGVCSINITDKRDGQRHDMWLPLQKVKTGRLHIVVTIFEENGEVDNQRNNKPEVDMFEPQKGGGPVLAVSSKKAQIVADNLKPINIEGQKETGIWVHQPGSEISKTWEPRKGKNQQLDTEVEGKANDSITITAQSGTLKDSNSSGDENPEEKHRMKPIRRGLRKISSIFHRSPKKDEHVMSLVQSVQSPYSNIRAVNAKGGGGVKLIVEEKVVIEEKITVSGLDKVAKVGKTSSEESDPDNPSKGDAKAKSRNIFRHVFSRKRCRSLPGHSSRTKGRDVLVDSDLSEEDENVSSSPRPRPPKVEEITNVSESLANDSSDAKEQVIEPNSNRTSEGSSDGFEKIDYKDKNSPDKHVDK 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30821762 30827797 + BLOR11911 Blo03g00730 58194

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00730 632 MobiDBLite consensus disorder prediction 396 418 - -
Blo03g00730 632 CDD C2 200 298 - -
Blo03g00730 632 MobiDBLite consensus disorder prediction 504 632 - -
Blo03g00730 632 MobiDBLite consensus disorder prediction 583 611 - -
Blo03g00730 632 Pfam C2 domain 200 298 IPR000008 -
Blo03g00730 632 Gene3D C2 domain 182 314 IPR035892 -
Blo03g00730 632 MobiDBLite consensus disorder prediction 529 545 - -
Blo03g00730 632 MobiDBLite consensus disorder prediction 379 434 - -
Blo03g00730 632 ProSiteProfiles C2 domain profile. 182 296 IPR000008 -
Blo03g00730 632 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 559 - -
Blo03g00730 632 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 559 - -
Blo03g00730 632 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 189 315 IPR035892 -
Blo03g00730 632 MobiDBLite consensus disorder prediction 612 632 - -
Blo03g00730 632 SMART C2_3c 198 295 IPR000008 -
Blo03g00730 632 MobiDBLite consensus disorder prediction 379 395 - -
Blo03g00730 632 MobiDBLite consensus disorder prediction 504 528 - -
Blo03g00730 632 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 1 176 IPR031468 GO:0008289
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00730 - - - mnt:21403674 726.472
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00730 Blo-Chr3:30821762 Blo19g00065 Blo-Chr19:1613476 0 dispersed
Blo03g00728 Blo-Chr3:30579878 Blo03g00730 Blo-Chr3:30821762 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g824 Blo03g00730 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma07g01122 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004301 1 2 4 3 2 0 2 1 0 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 1 1 2 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g00730 Blo_Chr03 FPKM 67.740593 71.811897 20.938234 21.303659 6.777102 4.923641 6.874109 12.482179 12.933288 13.621804