Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g00758 ATGGAGTCGGGGTACATGGAGGAAAACTTAGTAGTTAGAGAAGTCAGAGCTAATGGAATTTTCACTCAAACTACGGAAGTTGAAGCCAAGCTGGATGAGGGTAACATTCAAGAGGCTGAATCTTCATTACGGGAAGGCTTATCGTTGAATTTTGAGGAAGCCAGAGCTCTTCTTGGAAAGTTGGAGTATCAAAGAGGCAATGTGGAAGGGGCTCTTCGTGTTTTTGATGGCATCGATCTCCAAGCAGCAATTCAGAGATTGCAACCTTCATTTGCGGAAAAGATGCCATCCAAAAAGGGTCGTTCTCACACAGATCCGCAGCATGCAGTCTCTCAGCATGCTGCTAACCTGGTACTTGAAGCCATATATTTAAAAGCAAAGTCTCTTCAAAAGCTTGGGAAATTAACTGAGGCTGCTCATGAGTGTCAAAATGTGCTCGATGCTCTGGAGAAGATATTCTATCTGGGCATACCAGATGTGCAAGTTGACAATAGATTGCAAGAGACAGTTAGTCAAGCTGTTGAGCTTCTTCCAGAGCTTTGGAAACAGGCGGGTTGCTACCAGGAAGCAATTTTTGCCTATCGACGAGCACTCTTGAGTCAATGGAACCTTGATAATGATACCTCTGCTAGGATTCACAAAGGATTTGCAGTTTTTCTACTTTATGGAGGAGTAGAAGCTAGCCCTCCTAGTTTAGCAGTTCAGGCTGAAGGCTCATATGTACCCAAAAACAATATAGAAGAGGCTATTCTACTTATGATGATTCTAATGAAGAATTTTTTCCTTGGTAAGATCAATTGGGATCCATCTGTAATGGATCACTTAACCTTCGCACTATCTTTATGCAGCCAAACTTCTATTTTAGCTAAACAATTTGAAGAAATCATGCCTGGAGTATATCACCGCATAGATCGATGGATGTCTTTAGCTCTTTGTTACAGTGGAGCAGGACAAAATAAATCTTCCTTAAACCTGTTGAGGAAGTCCTTGCACAAACATGAAAAACCAAATGATATGCTGACATTGTTATTGGCTGCAAAGATCTGCAGTGAAGATTCTTATCTTGCTGCTGAAGGAGTTGGATATGCCCAAAGGGCAATTAGTAATGCAATAGGGAAAGAAGAGCATTTAAAGGGTGTGGGCCTTCGGATGTTGGGTCTTTGTTTAGGAAAGCAAGCTAAGATAGCCTCCTCAGATTTTGAGAGGTCACGTCTTCAGTCGGAGGCATTGAAATCTCTAGATGGGGCAGCTTCTCTGGAGCGCAATAATTCCGATTTGAATTGTGAGTTGGGAGTTCAATATGCAGAACACAGGAATTTGATTCCTGCTTTGCGTTATGCGAAGAAGTATACTGACAAAACTGGTGGTTCTGTCTTAAAAGGCTGGAAATTGCTTGCTCTTGTGTTGTCTTCTCAGAAAAGATTTGCAGAGGCTGAGGTAGTAACTGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAAGGACCACTTCTCAGGCTTAAAGCCAAGCTGAAAATCTCCCAGTCACTACACATGGATGCTATCAAAACTTATCGTTACCTCCTTGCATTAGTTCAAGCTCAAAGAAAATCATTTGGGCGGCCACTTAAACTTGTTAATCGGATTGAGGATGACAAGGTCCACGAATTTGAAATATGGCATGGCCTGGCAAACTTGTACGCCAGCCTTTCACATTGGAAAGATGCAGAGATATGTTTGGGAAAGACCAGAGAACTAAAACAGTACTCTGCTGAGACACTGCATGAACTAGAATCTTTATTTCATTCCAATGCTATCAATAGTGTGATATGTGAAGGACGGGGACAAATCCCAGAAGCTCTATCTGCTTATATTAATGCCCTCCTACTTGAGCCTTGCTATGTTCCTTGCAAGATATTGATTGGTGCCCTGTTGACCAAAACAGGCTCACAGTTACCGATTGCCAAATCCTTGCTCTCAGATGCGTTGAGGATCAACCCGACCAATAGGAAGGCTTGGTATTATTTGGGAGTTATTCATAGGGAGGATGGGCGACTAGCCGATGCAATCGATTGTTTTCAGGCTGCGTCGATGCTCGAAGAATCCGATCCAATCGAAAGCTTCAGCTCTGTTCTCTAA 2118 42.68 MESGYMEENLVVREVRANGIFTQTTEVEAKLDEGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSFAEKMPSKKGRSHTDPQHAVSQHAANLVLEAIYLKAKSLQKLGKLTEAAHECQNVLDALEKIFYLGIPDVQVDNRLQETVSQAVELLPELWKQAGCYQEAIFAYRRALLSQWNLDNDTSARIHKGFAVFLLYGGVEASPPSLAVQAEGSYVPKNNIEEAILLMMILMKNFFLGKINWDPSVMDHLTFALSLCSQTSILAKQFEEIMPGVYHRIDRWMSLALCYSGAGQNKSSLNLLRKSLHKHEKPNDMLTLLLAAKICSEDSYLAAEGVGYAQRAISNAIGKEEHLKGVGLRMLGLCLGKQAKIASSDFERSRLQSEALKSLDGAASLERNNSDLNCELGVQYAEHRNLIPALRYAKKYTDKTGGSVLKGWKLLALVLSSQKRFAEAEVVTDAALDETAKWEQGPLLRLKAKLKISQSLHMDAIKTYRYLLALVQAQRKSFGRPLKLVNRIEDDKVHEFEIWHGLANLYASLSHWKDAEICLGKTRELKQYSAETLHELESLFHSNAINSVICEGRGQIPEALSAYINALLLEPCYVPCKILIGALLTKTGSQLPIAKSLLSDALRINPTNRKAWYYLGVIHREDGRLADAIDCFQAASMLEESDPIESFSSVL 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31999471 32003885 + BLOR11939 Blo03g00758 58222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g00758 705 SUPERFAMILY TPR-like 520 687 IPR011990 GO:0005515
Blo03g00758 705 SUPERFAMILY TPR-like 407 581 IPR011990 GO:0005515
Blo03g00758 705 Pfam Tetratricopeptide repeat 647 689 - -
Blo03g00758 705 Gene3D Tetratricopeptide repeat domain 24 251 IPR011990 GO:0005515
Blo03g00758 705 ProSiteProfiles TPR repeat profile. 663 696 IPR019734 GO:0005515
Blo03g00758 705 PANTHER CALMODULIN-BINDING PROTEIN 1 704 - -
Blo03g00758 705 SUPERFAMILY TPR-like 119 485 IPR011990 GO:0005515
Blo03g00758 705 SUPERFAMILY TPR-like 32 198 IPR011990 GO:0005515
Blo03g00758 705 Gene3D Tetratricopeptide repeat domain 501 698 IPR011990 GO:0005515
Blo03g00758 705 PANTHER PROTEIN NPG1 1 704 IPR043376 -
Blo03g00758 705 Gene3D Tetratricopeptide repeat domain 290 494 IPR011990 GO:0005515
Blo03g00758 705 SMART tpr_5 303 336 IPR019734 GO:0005515
Blo03g00758 705 SMART tpr_5 459 492 IPR019734 GO:0005515
Blo03g00758 705 SMART tpr_5 550 583 IPR019734 GO:0005515
Blo03g00758 705 SMART tpr_5 119 152 IPR019734 GO:0005515
Blo03g00758 705 SMART tpr_5 663 696 IPR019734 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00758 Blo-Chr3:31999471 Blo07g00276 Blo-Chr7:3252829 0 dispersed
Blo03g00758 Blo-Chr3:31999471 Blo03g00759 Blo-Chr3:32007024 1.17E-75 tandem
Blo19g00094 Blo-Chr19:2436350 Blo03g00758 Blo-Chr3:31999471 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g00758 K21843 - csv:101206641 1104.74